Factsheet for Os09t0414600-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

nucleus: 23777608

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0635550-00
Os02t0706600-00
Os03t0120400-01
Os05t0579300-01
Os08t0438400-01
Os08t0479400-01
Os09t0414600-02
Os09t0466400-01
Os10t0537400-00
Os11t0243300-01
Os12t0208900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G15210.1	Os11t0243300-01	AT1G14440.1	16428600
AT5G15210.1	Os12t0208900-00	AT1G14440.1	16428600
AT5G15210.1	Os01t0635550-00	AT1G75240.1	16428600
AT5G15210.1	Os02t0706600-00	AT1G75240.1	16428600
AT5G15210.1	Os05t0579300-01	AT1G75240.1	16428600
AT5G15210.1	Os03t0120400-01	AT2G18196.1	18974936
AT5G15210.1	Os10t0537400-00	AT2G18196.1	18974936
AT5G15210.1	Os01t0635550-00	AT3G50890.1	16428600
AT5G15210.1	Os02t0706600-00	AT3G50890.1	16428600
AT5G15210.1	Os05t0579300-01	AT3G50890.1	16428600
AT5G15210.1	Os08t0438400-01	AT5G15210.1	16428600
AT5G15210.1	Os09t0414600-02	AT5G15210.1	16428600
AT5G15210.1	Os08t0438400-01	AT5G15210.1	21245844
AT5G15210.1	Os09t0414600-02	AT5G15210.1	21245844
AT5G15210.1	Os08t0479400-01	AT5G65410.1	16428600
AT5G15210.1	Os09t0466400-01	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0124500-01	Rice	cytosol, plastid	33.95	35.24
Os11t0128300-01	Rice	cytosol, plastid	33.95	35.24
Os08t0438100-01	Rice	cytosol	29.36	34.41
KRG89637	Soybean	nucleus	46.79	28.02
GSMUA_Achr6P02700_001	Banana	nucleus	60.55	27.73
GSMUA_Achr10P...	Banana	nucleus	58.72	24.52
Os08t0438400-01	Rice	plastid	64.22	20.71
Bra008712.1-P	Field mustard	cytosol	47.71	19.77
CDX69541	Canola	nucleus	47.71	19.77
AT5G15210.1	Thale cress	nucleus	48.62	19.56
PGSC0003DMT400080288	Potato	nucleus	50.46	19.16
KRH74865	Soybean	nucleus	50.46	18.58
KRH70724	Soybean	nucleus	49.54	18.56
Solyc05g007580.1.1	Tomato	nucleus	49.54	18.18
Os01t0635550-00	Rice	nucleus	34.86	16.38
KRH50585	Soybean	nucleus	47.71	14.53
Os05t0579300-01	Rice	nucleus	33.95	14.51
Os09t0466400-01	Rice	nucleus	36.7	14.34
Os03t0718500-00	Rice	mitochondrion, nucleus, peroxisome	30.28	13.87
CDX85059	Canola	nucleus	30.28	13.87
Os08t0479400-01	Rice	nucleus	36.7	13.79
Os04t0434500-00	Rice	nucleus	31.19	11.97
VIT_01s0026g02460.t01	Wine grape	nucleus	24.77	11.74
Os11t0243300-01	Rice	cytosol, mitochondrion, nucleus, plastid	40.37	10.55
Os02t0706600-00	Rice	nucleus	38.53	9.84
Os12t0208900-00	Rice	nucleus	5.5	2.7

Protein Annotations

MapMan:15.5.3.13	ProteinID:BAF25083.1	ProteinID:BAT08071.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0046872	InterPro:IPR006456	EnsemblPlantsGene:Os09g0414600	EnsemblPlants:Os09t0414600-02	PFAM:PD125774	PFAM:PF04770
PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF48	UniProt:Q0J1T2	TIGRFAMs:TIGR01566	UniParc:UPI0000DD9720
InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:	:	:

Description

zinc finger homeodomain class homeobox transcription factor 9Conserved hypothetical protein. (Os09t0414600-01);Similar to ZF-HD homeobox protein (Fragment). (Os09t0414600-02)

Coordinates

chr9:-:14812210..14813725

Molecular Weight (calculated)

11524.9 Da

IEP (calculated)

10.394

GRAVY (calculated)

-0.473

Length

109 amino acids

Sequence
(BLAST)

001: MEAMDVKYKP LVFPNGAIKK AAKPAAVAPA VGGGGGGETV YRECLKNHAA SLGGHALDGC GEFMPSPAAN PADPTSLRCA ACGCHRNFHR RTCCCRWGRA
101: GRRRGSRRR

Best Arabidopsis Sequence Match ( AT1G69600.1 )
(BLAST)

001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS

Arabidopsis Description

ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.