Factsheet for Zm00001d003645_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0434500-00	Rice	nucleus	76.33	80.63
TraesCS2B01G322200.1	Wheat	nucleus	70.67	72.35
TraesCS2A01G305400.1	Wheat	nucleus	71.0	72.2
TraesCS2D01G303900.1	Wheat	nucleus	70.33	72.01
HORVU2Hr1G075950.1	Barley	nucleus	69.0	70.89
Zm00001d052395_P001	Maize	plastid	10.67	37.21
Zm00001d009674_P001	Maize	nucleus	28.33	35.56
Zm00001d013409_P001	Maize	cytosol, mitochondrion, nucleus	27.33	34.17
Zm00001d033791_P001	Maize	cytosol, mitochondrion, nucleus	26.0	33.77
Zm00001d023286_P001	Maize	cytosol	11.0	33.67
Zm00001d023289_P001	Maize	cytosol	11.0	33.67
Zm00001d044662_P001	Maize	cytosol, plastid	11.0	33.0
Zm00001d020774_P001	Maize	nucleus	28.33	31.14
Zm00001d032177_P001	Maize	mitochondrion	12.33	31.09
Zm00001d020459_P001	Maize	mitochondrion	11.33	30.63
Zm00001d031840_P001	Maize	nucleus	30.67	29.87
Zm00001d005931_P001	Maize	nucleus	28.0	29.37
Zm00001d050452_P001	Maize	mitochondrion	12.0	28.35
Zm00001d041780_P001	Maize	nucleus	32.33	27.79
Zm00001d020460_P001	Maize	nucleus	31.33	25.41
Zm00001d005757_P001	Maize	nucleus	30.0	24.93
Zm00001d032175_P001	Maize	cytosol	29.33	23.59
Zm00001d049000_P001	Maize	plastid	33.0	23.57
Zm00001d050443_P001	Maize	nucleus	27.67	22.68
Zm00001d017784_P001	Maize	nucleus	27.33	19.66
Zm00001d051573_P001	Maize	nucleus	28.0	18.83

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100285642	MapMan:15.5.3.13	UniProt:A0A060CVP0	ProteinID:AIB04516.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
ProteinID:ONM17349.1	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF18
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI0002220116	InterPro:ZF_HD_homeobox_Cys/His_dimer	EnsemblPlantsGene:Zm00001d003645
EnsemblPlants:Zm00001d003645_P001	EnsemblPlants:Zm00001d003645_T001	SEG:seg	:	:	:

Description

ZF-HD-transcription factor 15ZF-HD homeobox protein

Coordinates

chr2:+:51732292..51733194

Molecular Weight (calculated)

31132.4 Da

IEP (calculated)

7.224

GRAVY (calculated)

-0.437

Length

300 amino acids

Sequence
(BLAST)

001: MMDHLSLVPY DGAGGGGDAA GGKYKECMRN HAAAMGGQAF DGCGEYMASS PDTLKCAACG CHRSFHRRAL AAASPCAPPV FFRPPPPPAL PAPPQQHFHH
101: HHHHQAALQG FLPSVPVPVP APPPHLALPY HAVPNAAAAP PWLAARAGSE TPPRLDDFGV GLAPGSGAGS GSGSFGRKRF RTKFTPEQKE RMREFAEKQG
201: WRIQRNDDGA LDRFCDEIGV KRQVLKVWMH NHKNQLASNS VAAAAAAGIG LSPAAGAGTA TGTGTGVGIT GDGDDDDDDD TDDSPPRAAV SSPSPSPISV

Best Arabidopsis Sequence Match ( AT2G02540.1 )
(BLAST)

001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP

Arabidopsis Description

ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.