Factsheet for Zm00001d009674_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005757_P001
Zm00001d005931_P001
Zm00001d009674_P001
Zm00001d017784_P001
Zm00001d020460_P001
Zm00001d020774_P001
Zm00001d031840_P001
Zm00001d032175_P001
Zm00001d041780_P001
Zm00001d049000_P001
Zm00001d050443_P001
Zm00001d051573_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75240.1	Zm00001d041780_P001	AT1G14440.1	16428600
AT1G75240.1	Zm00001d049000_P001	AT1G14440.1	16428600
AT1G75240.1	Zm00001d009674_P001	AT1G75240.1	16428600
AT1G75240.1	Zm00001d017784_P001	AT1G75240.1	16428600
AT1G75240.1	Zm00001d051573_P001	AT1G75240.1	16428600
AT1G75240.1	Zm00001d009674_P001	AT3G50890.1	16428600
AT1G75240.1	Zm00001d017784_P001	AT3G50890.1	16428600
AT1G75240.1	Zm00001d051573_P001	AT3G50890.1	16428600
AT1G75240.1	Zm00001d005757_P001	AT5G15210.1	16428600
AT1G75240.1	Zm00001d020460_P001	AT5G15210.1	16428600
AT1G75240.1	Zm00001d032175_P001	AT5G15210.1	16428600
AT1G75240.1	Zm00001d050443_P001	AT5G15210.1	16428600
AT1G75240.1	Zm00001d005931_P001	AT5G65410.1	16428600
AT1G75240.1	Zm00001d020774_P001	AT5G65410.1	16428600
AT1G75240.1	Zm00001d031840_P001	AT5G65410.1	16428600
AT2G18350.1	Zm00001d041780_P001	AT1G14440.1	16428600
AT2G18350.1	Zm00001d049000_P001	AT1G14440.1	16428600
AT2G18350.1	Zm00001d005931_P001	AT5G65410.1	16428600
AT2G18350.1	Zm00001d020774_P001	AT5G65410.1	16428600
AT2G18350.1	Zm00001d031840_P001	AT5G65410.1	16428600
AT3G50890.1	Zm00001d041780_P001	AT1G14440.1	16428600
AT3G50890.1	Zm00001d049000_P001	AT1G14440.1	16428600
AT3G50890.1	Zm00001d009674_P001	AT1G75240.1	16428600
AT3G50890.1	Zm00001d017784_P001	AT1G75240.1	16428600
AT3G50890.1	Zm00001d051573_P001	AT1G75240.1	16428600
AT3G50890.1	Zm00001d005757_P001	AT5G15210.1	16428600
AT3G50890.1	Zm00001d020460_P001	AT5G15210.1	16428600
AT3G50890.1	Zm00001d032175_P001	AT5G15210.1	16428600
AT3G50890.1	Zm00001d050443_P001	AT5G15210.1	16428600
AT3G50890.1	Zm00001d005931_P001	AT5G65410.1	16428600
AT3G50890.1	Zm00001d020774_P001	AT5G65410.1	16428600
AT3G50890.1	Zm00001d031840_P001	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0579300-01	Rice	nucleus	66.53	62.35
OQU78488	Sorghum	plastid	87.03	55.76
TraesCS1A01G418600.1	Wheat	nucleus	52.3	55.56
HORVU1Hr1G091470.1	Barley	nucleus	53.97	54.89
TraesCS1D01G426300.1	Wheat	nucleus	57.32	54.8
TraesCS1B01G448600.1	Wheat	nucleus	57.74	54.76
TraesCS3A01G226100.1	Wheat	nucleus	51.46	52.34
TraesCS3B01G258400.1	Wheat	nucleus	50.63	52.16
TraesCS3D01G224100.1	Wheat	nucleus	51.46	52.12
Os01t0635550-00	Rice	nucleus	49.79	51.29
Zm00001d052395_P001	Maize	plastid	12.97	36.05
Zm00001d023289_P001	Maize	cytosol	14.64	35.71
Zm00001d023286_P001	Maize	cytosol	14.64	35.71
CDX77960	Canola	nucleus	30.54	33.33
Bra036852.1-P	Field mustard	nucleus	30.54	33.33
Zm00001d044662_P001	Maize	cytosol, plastid	13.81	33.0
CDX73775	Canola	nucleus	29.29	32.56
Zm00001d020774_P001	Maize	nucleus	35.98	31.5
CDX90679	Canola	nucleus	31.8	31.28
Zm00001d033791_P001	Maize	cytosol, mitochondrion, nucleus	30.13	31.17
AT3G50890.1	Thale cress	nucleus	32.22	30.92
Solyc04g080490.2.1	Tomato	nucleus	36.82	30.34
PGSC0003DMT400009581	Potato	nucleus	35.56	29.93
CDY28987	Canola	nucleus	30.54	29.8
Zm00001d013409_P001	Maize	cytosol, mitochondrion, nucleus	29.71	29.58
CDY70550	Canola	nucleus	31.8	29.57
CDY37252	Canola	nucleus	32.22	29.5
Zm00001d005931_P001	Maize	nucleus	35.15	29.37
CDY62531	Canola	nucleus	32.22	29.28
CDY70108	Canola	nucleus	32.22	29.06
Bra037224.1-P	Field mustard	nucleus	31.8	28.68
AT2G18350.1	Thale cress	nucleus	31.38	28.63
Zm00001d003645_P001	Maize	nucleus	35.56	28.33
Zm00001d031840_P001	Maize	nucleus	36.4	28.25
Zm00001d020459_P001	Maize	mitochondrion	12.97	27.93
CDY71124	Canola	nucleus	29.71	27.63
CDY45419	Canola	nucleus	32.64	27.08
VIT_18s0001g12580.t01	Wine grape	nucleus	35.56	26.9
Zm00001d032177_P001	Maize	mitochondrion	13.39	26.89
Bra003759.1-P	Field mustard	nucleus	33.05	26.87
CDX85886	Canola	nucleus	33.05	26.87
Solyc02g085160.1.1	Tomato	nucleus	32.64	26.62
CDX68137	Canola	nucleus	33.05	26.6
Bra015857.1-P	Field mustard	nucleus	33.47	26.49
CDX73152	Canola	nucleus	33.05	26.42
Bra008185.1-P	Field mustard	nucleus	32.22	26.19
Zm00001d050452_P001	Maize	mitochondrion	13.81	25.98
KRH08258	Soybean	nucleus	35.56	25.84
Zm00001d017784_P001	Maize	nucleus	44.77	25.66
Zm00001d041780_P001	Maize	nucleus	37.24	25.5
PGSC0003DMT400009033	Potato	nucleus	32.22	25.5
KRH69909	Soybean	nucleus	35.56	25.45
Zm00001d051573_P001	Maize	nucleus	46.86	25.11
AT1G75240.1	Thale cress	nucleus	32.22	24.92
Bra012882.1-P	Field mustard	nucleus	27.62	24.91
KRH76785	Soybean	nucleus	32.64	24.61
GSMUA_Achr3P19060_001	Banana	nucleus	23.43	23.33
Zm00001d005757_P001	Maize	nucleus	34.31	22.71
KRH28682	Soybean	nucleus	31.8	22.62
Zm00001d020460_P001	Maize	nucleus	34.73	22.43
Zm00001d032175_P001	Maize	cytosol	34.73	22.25
GSMUA_Achr6P24230_001	Banana	nucleus	20.08	21.52
Zm00001d050443_P001	Maize	nucleus	32.64	21.31
Zm00001d049000_P001	Maize	plastid	36.82	20.95
VIT_04s0023g01880.t01	Wine grape	nucleus	33.89	18.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	UniProt:A0A1D6FL28	ProteinID:AQK92402.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456	PFAM:PD125774
PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF30	SUPFAM:SSF46689	TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566	UniParc:UPI0008426825	InterPro:ZF_HD_homeobox_Cys/His_dimer	EnsemblPlantsGene:Zm00001d009674	EnsemblPlants:Zm00001d009674_P001	EnsemblPlants:Zm00001d009674_T001
SEG:seg	:	:	:	:	:

Description

ZF-HD-transcription factor 11Zinc-finger homeodomain protein 5

Coordinates

chr8:+:75385981..75386700

Molecular Weight (calculated)

25996.8 Da

IEP (calculated)

9.639

GRAVY (calculated)

-0.783

Length

239 amino acids

Sequence
(BLAST)

001: MGASSAPPPC LGPGRGPGNQ NHAAEATYHE CLRNHAAALG GHVVDGCGEF MPEDADRLKC AACGCHRSFH RKGDAGRRHQ LLLPPPAAAV PRVPLLLPPP
101: HPYAAGAAHP HYASPPLFPY HGTPSGTTTE SSSEERGPPS GFAAAPHAHA QGHVRRKRIR TKFTPEQKEQ MLAFAERLGW RMQKQDDALV QHFCDQVGVR
201: RQVFKVWMHN NKHIGSGGRR QPPPHLPPPE GQQQPQQPQ

Best Arabidopsis Sequence Match ( AT2G02540.1 )
(BLAST)

001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP

Arabidopsis Description

ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.