Factsheet for Zm00001d005757_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005757_P001
Zm00001d005931_P001
Zm00001d009674_P001
Zm00001d017784_P001
Zm00001d020460_P001
Zm00001d020774_P001
Zm00001d027405_P001
Zm00001d031840_P001
Zm00001d032175_P001
Zm00001d041780_P001
Zm00001d049000_P001
Zm00001d050443_P001
Zm00001d051573_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G15210.1	Zm00001d041780_P001	AT1G14440.1	16428600
AT5G15210.1	Zm00001d049000_P001	AT1G14440.1	16428600
AT5G15210.1	Zm00001d009674_P001	AT1G75240.1	16428600
AT5G15210.1	Zm00001d017784_P001	AT1G75240.1	16428600
AT5G15210.1	Zm00001d051573_P001	AT1G75240.1	16428600
AT5G15210.1	Zm00001d027405_P001	AT2G18196.1	18974936
AT5G15210.1	Zm00001d009674_P001	AT3G50890.1	16428600
AT5G15210.1	Zm00001d017784_P001	AT3G50890.1	16428600
AT5G15210.1	Zm00001d051573_P001	AT3G50890.1	16428600
AT5G15210.1	Zm00001d005757_P001	AT5G15210.1	16428600
AT5G15210.1	Zm00001d020460_P001	AT5G15210.1	16428600
AT5G15210.1	Zm00001d032175_P001	AT5G15210.1	16428600
AT5G15210.1	Zm00001d050443_P001	AT5G15210.1	16428600
AT5G15210.1	Zm00001d005757_P001	AT5G15210.1	21245844
AT5G15210.1	Zm00001d020460_P001	AT5G15210.1	21245844
AT5G15210.1	Zm00001d032175_P001	AT5G15210.1	21245844
AT5G15210.1	Zm00001d050443_P001	AT5G15210.1	21245844
AT5G15210.1	Zm00001d005931_P001	AT5G65410.1	16428600
AT5G15210.1	Zm00001d020774_P001	AT5G65410.1	16428600
AT5G15210.1	Zm00001d031840_P001	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020460_P001	Maize	nucleus	86.43	84.32
Zm00001d032175_P001	Maize	cytosol	50.69	49.06
Zm00001d050443_P001	Maize	nucleus	47.37	46.72
Zm00001d052395_P001	Maize	plastid	10.25	43.02
AT5G15210.1	Thale cress	nucleus	31.02	41.33
VIT_01s0026g02460.t01	Wine grape	nucleus	26.04	40.87
Zm00001d023289_P001	Maize	cytosol	10.8	39.8
Zm00001d023286_P001	Maize	cytosol	10.8	39.8
PGSC0003DMT400080288	Potato	nucleus	31.3	39.37
Solyc05g007580.1.1	Tomato	nucleus	31.86	38.72
Bra008712.1-P	Field mustard	cytosol	27.98	38.4
CDX69541	Canola	nucleus	27.7	38.02
Zm00001d044662_P001	Maize	cytosol, plastid	10.53	38.0
KRH70724	Soybean	nucleus	28.81	35.74
CDX85059	Canola	nucleus	22.99	34.87
KRH74865	Soybean	nucleus	28.53	34.8
Zm00001d009674_P001	Maize	nucleus	22.71	34.31
KRG89637	Soybean	nucleus	16.07	31.87
Zm00001d013409_P001	Maize	cytosol, mitochondrion, nucleus	20.78	31.25
Zm00001d020774_P001	Maize	nucleus	23.55	31.14
Zm00001d033791_P001	Maize	cytosol, mitochondrion, nucleus	19.67	30.74
Zm00001d003645_P001	Maize	nucleus	24.93	30.0
Zm00001d020459_P001	Maize	mitochondrion	9.14	29.73
KRH50585	Soybean	nucleus	29.36	29.61
Zm00001d032177_P001	Maize	mitochondrion	9.7	29.41
Zm00001d005931_P001	Maize	nucleus	22.71	28.67
Zm00001d050452_P001	Maize	mitochondrion	9.97	28.35
Zm00001d031840_P001	Maize	nucleus	23.55	27.6
Zm00001d041780_P001	Maize	nucleus	24.38	25.21
Zm00001d049000_P001	Maize	plastid	24.65	21.19
Zm00001d017784_P001	Maize	nucleus	23.27	20.14
Zm00001d051573_P001	Maize	nucleus	23.82	19.28

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100284323	MapMan:15.5.3.13	UniProt:A0A060CVL0	ProteinID:AIB04491.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
ProteinID:ONM21820.1	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF48
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI000221737A	InterPro:ZF_HD_homeobox_Cys/His_dimer	EnsemblPlantsGene:Zm00001d005757
EnsemblPlants:Zm00001d005757_P001	EnsemblPlants:Zm00001d005757_T001	SEG:seg	:	:	:

Description

ZF-HD-transcription factor 20ZF-HD homeobox protein

Coordinates

chr2:+:186640920..186642005

Molecular Weight (calculated)

37716.2 Da

IEP (calculated)

7.900

GRAVY (calculated)

-0.578

Length

361 amino acids

Sequence
(BLAST)

001: MEAMDVKYKP VMFPNGAAFK KAKPAAVAPA GEPLYRECLK NHAASLGGHA VDGCGEFMPS PGANPADPTS LKCAACGCHR NFHRRTVEGS PPQPAPAPLA
101: LPPPPPPPPS VLHGQTHRGG EDTPEDRHPG VVDADDPDSD SEGSEYDEER SVSPPPPHHV PAPVAQQPPP PSYFPAAAPH QHMLLSLGPG AAVAAAAQRL
201: APAQLTPSSA PPPGGAMPRK RFRTKFTAEQ KQRMQELSER LGWRLQKRDE AVVDEWCRDM GVGKGVFKVW MHNNKHNFLG GHSARRSVSA SSGAAALLQT
301: PCANAGAAAP SFNPSRLTPP PPVLTSSPTG FNINGAASSS PPTVTADHTD NANGASSPHS A

Best Arabidopsis Sequence Match ( AT1G69600.1 )
(BLAST)

001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS

Arabidopsis Description

ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.