Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g085160.1.1 | Tomato | nucleus | 93.71 | 96.59 |
| PGSC0003DMT400084919 | Potato | nucleus | 25.17 | 43.43 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 20.53 | 42.18 |
| PGSC0003DMT400083993 | Potato | nucleus | 24.83 | 41.9 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 11.26 | 40.96 |
| PGSC0003DMT400009581 | Potato | nucleus | 32.78 | 34.86 |
| PGSC0003DMT400060623 | Potato | nucleus | 26.82 | 33.33 |
| PGSC0003DMT400033624 | Potato | nucleus | 26.49 | 33.33 |
| TraesCS1A01G418600.1 | Wheat | nucleus | 24.83 | 33.33 |
| Os05t0579300-01 | Rice | nucleus | 27.81 | 32.94 |
| Zm00001d009674_P001 | Maize | nucleus | 25.5 | 32.22 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 24.83 | 31.91 |
| TraesCS3B01G258400.1 | Wheat | nucleus | 24.5 | 31.9 |
| Os01t0635550-00 | Rice | nucleus | 24.17 | 31.47 |
| PGSC0003DMT400053397 | Potato | nucleus | 29.8 | 31.36 |
| KRH08258 | Soybean | nucleus | 34.11 | 31.31 |
| KRH69909 | Soybean | nucleus | 34.44 | 31.14 |
| TraesCS3A01G226100.1 | Wheat | nucleus | 24.17 | 31.06 |
| TraesCS3D01G224100.1 | Wheat | nucleus | 24.17 | 30.93 |
| TraesCS1B01G448600.1 | Wheat | nucleus | 25.5 | 30.56 |
| TraesCS1D01G426300.1 | Wheat | nucleus | 24.83 | 30.0 |
| KRH76785 | Soybean | nucleus | 30.13 | 28.71 |
| GSMUA_Achr2P23010_001 | Banana | nucleus | 27.48 | 28.52 |
| GSMUA_Achr3P31090_001 | Banana | nucleus | 26.16 | 27.92 |
| PGSC0003DMT400080288 | Potato | nucleus | 26.49 | 27.87 |
| KRH28682 | Soybean | nucleus | 30.46 | 27.38 |
| GSMUA_Achr10P... | Banana | nucleus | 23.84 | 27.17 |
| GSMUA_Achr8P27010_001 | Banana | nucleus | 28.48 | 26.79 |
| PGSC0003DMT400035635 | Potato | nucleus | 27.15 | 26.71 |
| PGSC0003DMT400090846 | Potato | cytosol | 10.6 | 26.45 |
| PGSC0003DMT400017840 | Potato | nucleus | 27.48 | 25.23 |
| PGSC0003DMT400086860 | Potato | cytosol | 9.6 | 24.37 |
| GSMUA_Achr4P14910_001 | Banana | nucleus | 26.16 | 23.94 |
| GSMUA_Achr7P25600_001 | Banana | nucleus | 27.48 | 23.92 |
| PGSC0003DMT400034368 | Potato | nucleus | 27.15 | 23.7 |
| GSMUA_Achr4P07850_001 | Banana | nucleus | 25.5 | 23.26 |
| VIT_04s0023g01880.t01 | Wine grape | nucleus | 32.45 | 22.63 |
| GSMUA_Achr6P27240_001 | Banana | plastid | 28.48 | 22.4 |
| GSMUA_Achr6P22120_001 | Banana | nucleus | 29.14 | 22.11 |
| OQU78488 | Sorghum | plastid | 26.82 | 21.72 |
| KXG30914 | Sorghum | nucleus | 26.16 | 19.46 |
| Os02t0706600-00 | Rice | nucleus | 27.48 | 19.44 |
| Zm00001d017784_P001 | Maize | nucleus | 26.16 | 18.94 |
| GSMUA_Achr6P24230_001 | Banana | nucleus | 13.91 | 18.83 |
| Zm00001d051573_P001 | Maize | nucleus | 27.15 | 18.39 |
| GSMUA_Achr3P19060_001 | Banana | nucleus | 14.57 | 18.33 |
| TraesCS6B01G301000.1 | Wheat | nucleus | 27.48 | 18.0 |
| TraesCS6A01G273700.1 | Wheat | nucleus | 27.48 | 17.85 |
| TraesCS6D01G253700.1 | Wheat | nucleus | 27.48 | 17.85 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 25.83 | 16.92 |
| PGSC0003DMT400044269 | Potato | nucleus | 17.88 | 12.89 |
| HORVU6Hr1G069070.1 | Barley | plastid | 9.93 | 10.68 |
| PGSC0003DMT400044270 | Potato | cytosol | 18.87 | 7.04 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102582136 | MapMan:15.5.3.13 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | UniProt:M0ZVH1 | PFAM:PD125774 |
| PFAM:PF04770 | EnsemblPlantsGene:PGSC0003DMG400003510 | PGSC:PGSC0003DMG400003510 | EnsemblPlants:PGSC0003DMT400009033 | PFscan:PS51523 | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF9 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI000296CF26 | RefSeq:XP_006340630.1 |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : | : |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400003510]
Coordinates
chr2:-:40388344..40389718
Molecular Weight (calculated)
34296.9 Da
IEP (calculated)
8.313
GRAVY (calculated)
-1.093
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHRGQEKDM GLPNPNPTSY NPSHLNQQES SSSAANKFLT APIASNIPNR TTNEQNIHEN TIFSPNQTLD QHNLTQNSDP DPVRQLSTSS ASERNITPVR
101: YKECLKNHAA NMGGYVRDGC GEFMPSGEEE TPEYLKCAAC DCHRNFHRKE TEDESQTPGV HRNNHRILNQ TPPSLPAVPT QQQHHHKYSH SYPRGHMAPV
201: MMSFGGNTGV AAESSSEDLN MFHGGQGIIQ PCNFSASKKR FRTKFSQQQK DRMLEFAEKL GWRIQKQDEQ EVHQFCNEVG VKRQVFKVWM HNSKQATKKK
301: QT
101: YKECLKNHAA NMGGYVRDGC GEFMPSGEEE TPEYLKCAAC DCHRNFHRKE TEDESQTPGV HRNNHRILNQ TPPSLPAVPT QQQHHHKYSH SYPRGHMAPV
201: MMSFGGNTGV AAESSSEDLN MFHGGQGIIQ PCNFSASKKR FRTKFSQQQK DRMLEFAEKL GWRIQKQDEQ EVHQFCNEVG VKRQVFKVWM HNSKQATKKK
301: QT
001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
Arabidopsis Description
ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.