Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P02700_001 | Banana | nucleus | 31.32 | 34.87 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 26.79 | 30.87 |
| GSMUA_Achr10P... | Banana | nucleus | 29.06 | 29.5 |
| Zm00001d032175_P001 | Maize | cytosol | 39.62 | 28.15 |
| EES15050 | Sorghum | cytosol | 41.13 | 27.95 |
| EES16563 | Sorghum | cytosol | 9.43 | 27.17 |
| AT5G15210.1 | Thale cress | nucleus | 27.55 | 26.94 |
| CDX85059 | Canola | nucleus | 23.77 | 26.47 |
| PGSC0003DMT400080288 | Potato | nucleus | 28.3 | 26.13 |
| Solyc05g007580.1.1 | Tomato | nucleus | 28.68 | 25.59 |
| CDX69541 | Canola | nucleus | 25.28 | 25.48 |
| EER93559 | Sorghum | cytosol, mitochondrion, nucleus | 22.26 | 25.21 |
| Bra008712.1-P | Field mustard | cytosol | 24.91 | 25.1 |
| KRH70724 | Soybean | nucleus | 27.55 | 25.09 |
| EES15144 | Sorghum | nucleus | 28.68 | 24.44 |
| KRH74865 | Soybean | nucleus | 27.17 | 24.32 |
| EER96888 | Sorghum | nucleus | 27.55 | 24.17 |
| EES07913 | Sorghum | cytosol | 8.68 | 23.47 |
| KXG35632 | Sorghum | nucleus | 33.21 | 23.1 |
| KXG23238 | Sorghum | nucleus | 26.79 | 21.65 |
| KXG25227 | Sorghum | mitochondrion | 9.81 | 20.47 |
| KRH50585 | Soybean | nucleus | 26.79 | 19.83 |
| OQU78488 | Sorghum | plastid | 26.79 | 19.03 |
| KRG89637 | Soybean | nucleus | 12.45 | 18.13 |
| KXG28111 | Sorghum | nucleus | 26.79 | 18.02 |
| KXG30914 | Sorghum | nucleus | 26.79 | 17.49 |
| KXG35630 | Sorghum | nucleus | 6.42 | 15.45 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | UniProt:A0A1W0VX74 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | EnsemblPlants:OQU86730 | ProteinID:OQU86730 |
| ProteinID:OQU86730.1 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF48 |
| EnsemblPlantsGene:SORBI_3003G135101 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI0009DC849F | InterPro:ZF_HD_homeobox_Cys/His_dimer |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:12775263..12776376
Molecular Weight (calculated)
29295.4 Da
IEP (calculated)
12.197
GRAVY (calculated)
-0.817
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEADPPLPP PGLRATPAQD GCGEFMPSLE ADPADPSSLR CATCRCHRNF HRRLAELPRC AVRRRRTTAC RPPSTRRPRR SRTRARISTR TARCRRYRAR
101: RARASKPPAV APRPPPPPAS ASLGPMPPAP PETVVPGAAA ARKRFRTKFS PEQKQRMQAL SERLGWRLQK RGEALVDECC QEMGVFKVWM HNNKHNFVGG
201: HNACRSASAS AAAAAAIHHH PSNHGPGWEL GLLRVRVRRR RLRLLPLPRG AATDGYGGEQ AGRRG
101: RARASKPPAV APRPPPPPAS ASLGPMPPAP PETVVPGAAA ARKRFRTKFS PEQKQRMQAL SERLGWRLQK RGEALVDECC QEMGVFKVWM HNNKHNFVGG
201: HNACRSASAS AAAAAAIHHH PSNHGPGWEL GLLRVRVRRR RLRLLPLPRG AATDGYGGEQ AGRRG
001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
Arabidopsis Description
ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.