CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92967
EER96888
EES15050
EES15144
KXG23238
KXG28111
KXG30914
KXG35632
KXG39011
OQU78488
OQU86730

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G15210.1	KXG23238	AT1G14440.1	16428600
AT5G15210.1	KXG28111	AT1G14440.1	16428600
AT5G15210.1	KXG30914	AT1G75240.1	16428600
AT5G15210.1	OQU78488	AT1G75240.1	16428600
AT5G15210.1	EER92967	AT2G18196.1	18974936
AT5G15210.1	KXG39011	AT2G18196.1	18974936
AT5G15210.1	KXG30914	AT3G50890.1	16428600
AT5G15210.1	OQU78488	AT3G50890.1	16428600
AT5G15210.1	EES15050	AT5G15210.1	16428600
AT5G15210.1	KXG35632	AT5G15210.1	16428600
AT5G15210.1	OQU86730	AT5G15210.1	16428600
AT5G15210.1	EES15050	AT5G15210.1	21245844
AT5G15210.1	KXG35632	AT5G15210.1	21245844
AT5G15210.1	OQU86730	AT5G15210.1	21245844
AT5G15210.1	EER96888	AT5G65410.1	16428600
AT5G15210.1	EES15144	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032175_P001	Maize	cytosol	77.69	81.23
KXG35632	Sorghum	nucleus	51.54	52.76
GSMUA_Achr6P02700_001	Banana	nucleus	30.51	50.0
GSMUA_Achr10P...	Banana	nucleus	29.74	44.44
VIT_01s0026g02460.t01	Wine grape	nucleus	24.62	41.74
OQU86730	Sorghum	nucleus	27.95	41.13
AT5G15210.1	Thale cress	nucleus	28.21	40.59
EES16563	Sorghum	cytosol	9.49	40.22
Bra008712.1-P	Field mustard	cytosol	26.15	38.78
CDX69541	Canola	nucleus	26.15	38.78
PGSC0003DMT400080288	Potato	nucleus	27.44	37.28
EES07913	Sorghum	cytosol	9.23	36.73
Solyc05g007580.1.1	Tomato	nucleus	27.69	36.36
KRH74865	Soybean	nucleus	26.92	35.47
KRH70724	Soybean	nucleus	26.41	35.4
CDX85059	Canola	nucleus	21.54	35.29
KRG89637	Soybean	nucleus	15.13	32.42
EER93559	Sorghum	cytosol, mitochondrion, nucleus	18.97	31.62
KRH50585	Soybean	nucleus	27.95	30.45
EER96888	Sorghum	nucleus	22.56	29.14
EES15144	Sorghum	nucleus	22.82	28.62
KXG35630	Sorghum	nucleus	7.95	28.18
KXG23238	Sorghum	nucleus	23.33	27.74
KXG25227	Sorghum	mitochondrion	8.97	27.56
KXG28111	Sorghum	nucleus	24.36	24.11
OQU78488	Sorghum	plastid	22.82	23.86
KXG30914	Sorghum	nucleus	21.03	20.2

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EntrezGene:8077835	UniProt:C5YLA6	EnsemblPlants:EES15050	ProteinID:EES15050
ProteinID:EES15050.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf
InterPro:Homeodomain_ZF_HD	InterPro:IPR006456	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948
PANTHER:PTHR31948:SF48	EnsemblPlantsGene:SORBI_3007G139200	SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI0001A87B8E
RefSeq:XP_002445555.1	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:56772162..56773696

Molecular Weight (calculated)

40287.3 Da

IEP (calculated)

7.015

GRAVY (calculated)

-0.373

Length

390 amino acids

Sequence
(BLAST)

001: MEGVVDLKYQ PVFPNGGVAA AAKKTARLGA AGVYRECLKN HAASLGGHAL DGCGEFMPSP EADPADPSSL RCAACGCHRN FHRRLAELPP PPPLLTLPPP
101: PPQPSLAALV PAPAAASHVM RDSFTMRGEE TPDDRVPAAF DEETEEESDE GSDFDEDRPV SPLPVPALPP HGYRQQTAPA PHMLLGLNTG VPSPGVQTPA
201: VAPRPPPPPA SASLGPMPPA PPGTVVPGAA AAAARKRFRT KFSPEQKQRM QALSERLGWR LQKRDEAVVD ECCQEMGVTK GVFKVWMHNN KHNFVGGHSA
301: RRSASASAAA AAAIHHHPSD AAAGAVYPSS SHGHAAAAPA AAPAAAVHHP SAPAAPVHAD FNINGAAADA ADYFRVQPST ASGGGSPQSS

Best Arabidopsis Sequence Match ( AT1G69600.1 )
(BLAST)

001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS

Arabidopsis Description

ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.