Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026589.1-P | Field mustard | nucleus | 70.32 | 72.67 |
| CDY09363 | Canola | nucleus | 68.71 | 71.48 |
| CDY41692 | Canola | nucleus | 68.71 | 71.0 |
| AT1G14440.1 | Thale cress | nucleus | 62.9 | 62.5 |
| GSMUA_Achr6P28870_001 | Banana | nucleus | 38.39 | 52.65 |
| GSMUA_Achr1P13300_001 | Banana | nucleus | 38.39 | 52.65 |
| GSMUA_Achr6P17420_001 | Banana | nucleus | 33.87 | 50.72 |
| GSMUA_Achr9P08090_001 | Banana | nucleus | 38.71 | 49.79 |
| GSMUA_Achr10P... | Banana | nucleus | 38.39 | 49.17 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 44.19 | 48.75 |
| GSMUA_Achr3P16680_001 | Banana | nucleus | 36.45 | 48.5 |
| AT1G18835.1 | Thale cress | mitochondrion | 13.55 | 47.73 |
| KRH51275 | Soybean | nucleus | 42.9 | 47.0 |
| KRH01880 | Soybean | nucleus | 41.94 | 45.45 |
| PGSC0003DMT400053397 | Potato | nucleus | 40.65 | 43.9 |
| Solyc01g102980.2.1 | Tomato | nucleus | 40.97 | 43.79 |
| AT3G28917.1 | Thale cress | mitochondrion | 13.87 | 43.0 |
| AT4G24660.2 | Thale cress | nucleus | 30.97 | 41.56 |
| AT1G74660.1 | Thale cress | mitochondrion | 13.23 | 40.2 |
| AT1G69600.1 | Thale cress | nucleus | 26.13 | 33.47 |
| AT5G65410.1 | Thale cress | nucleus | 30.0 | 33.33 |
| AT5G60480.1 | Thale cress | nucleus | 23.23 | 32.29 |
| AT3G50890.1 | Thale cress | nucleus | 25.16 | 31.33 |
| AT1G75240.1 | Thale cress | nucleus | 30.97 | 31.07 |
| AT5G15210.1 | Thale cress | nucleus | 26.77 | 30.63 |
| AT2G18350.1 | Thale cress | nucleus | 25.81 | 30.53 |
| KXG23238 | Sorghum | nucleus | 31.29 | 29.57 |
| KXG28111 | Sorghum | nucleus | 36.45 | 28.68 |
| TraesCS4D01G086300.1 | Wheat | nucleus | 35.81 | 28.53 |
| Zm00001d041780_P001 | Maize | nucleus | 31.61 | 28.08 |
| TraesCS4B01G089700.1 | Wheat | nucleus | 35.81 | 27.96 |
| Os11t0243300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 37.42 | 27.82 |
| TraesCS4A01G226800.1 | Wheat | nucleus | 35.48 | 27.43 |
| AT5G42780.1 | Thale cress | nucleus | 21.29 | 27.27 |
| AT3G28920.1 | Thale cress | nucleus | 27.42 | 27.24 |
| Zm00001d049000_P001 | Maize | plastid | 36.13 | 26.67 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 35.48 | 26.19 |
| Os12t0208900-00 | Rice | nucleus | 18.71 | 26.13 |
| AT5G39760.1 | Thale cress | nucleus | 28.06 | 26.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | EntrezGene:814784 | UniProt:A0A178VSZ2 | ProteinID:AAC18932.1 | ProteinID:AEC05592.1 |
| ProteinID:ANM63181.1 | ArrayExpress:AT2G02540 | EnsemblPlantsGene:AT2G02540 | RefSeq:AT2G02540 | TAIR:AT2G02540 | RefSeq:AT2G02540-TAIR-G |
| EnsemblPlants:AT2G02540.2 | Symbol:ATHB21 | EMBL:AY091515 | EMBL:AY773834 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019748 | GO:GO:0019760 | GO:GO:0042803 | GO:GO:0043565 |
| GO:GO:0046872 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:Homeodomain_ZF_HD | InterPro:IPR001356 | InterPro:IPR006456 |
| RefSeq:NP_001318182.1 | RefSeq:NP_178358.1 | UniProt:O64722 | ProteinID:OAP08491.1 | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS50071 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF19 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | UniParc:UPI00000A4176 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : |
Description
ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
Coordinates
chr2:+:683635..685496
Molecular Weight (calculated)
34717.9 Da
IEP (calculated)
8.401
GRAVY (calculated)
-0.877
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.