Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09363 | Canola | nucleus | 97.67 | 98.32 |
| Bra026589.1-P | Field mustard | nucleus | 95.67 | 95.67 |
| AT2G02540.2 | Thale cress | nucleus | 71.0 | 68.71 |
| CDY45257 | Canola | nucleus | 56.67 | 54.66 |
| CDX81638 | Canola | nucleus | 56.67 | 53.97 |
| CDY53549 | Canola | nucleus | 56.0 | 53.5 |
| CDY39311 | Canola | nucleus | 53.67 | 52.61 |
| GSMUA_Achr1P13300_001 | Banana | nucleus | 39.0 | 51.77 |
| GSMUA_Achr6P28870_001 | Banana | nucleus | 38.0 | 50.44 |
| GSMUA_Achr6P17420_001 | Banana | nucleus | 34.67 | 50.24 |
| CDX81897 | Canola | mitochondrion | 14.67 | 50.0 |
| CDX83807 | Canola | mitochondrion | 14.67 | 50.0 |
| CDX86404 | Canola | mitochondrion | 15.0 | 49.45 |
| CDX85228 | Canola | mitochondrion, nucleus | 15.0 | 49.45 |
| GSMUA_Achr3P16680_001 | Banana | nucleus | 38.33 | 49.36 |
| CDY21695 | Canola | mitochondrion | 14.33 | 48.86 |
| CDY26722 | Canola | mitochondrion | 14.33 | 48.86 |
| CDX96695 | Canola | mitochondrion | 14.33 | 48.86 |
| CDY19248 | Canola | mitochondrion | 14.33 | 48.86 |
| GSMUA_Achr9P08090_001 | Banana | nucleus | 38.33 | 47.72 |
| GSMUA_Achr10P... | Banana | nucleus | 38.33 | 47.52 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 43.67 | 46.62 |
| KRH51275 | Soybean | nucleus | 42.33 | 44.88 |
| CDX96558 | Canola | mitochondrion | 14.0 | 44.68 |
| KRH01880 | Soybean | nucleus | 42.0 | 44.06 |
| CDX73105 | Canola | mitochondrion | 13.67 | 43.62 |
| CDY08945 | Canola | nucleus | 30.33 | 43.33 |
| CDY20009 | Canola | mitochondrion | 14.0 | 42.86 |
| CDX88950 | Canola | nucleus | 30.0 | 42.86 |
| PGSC0003DMT400053397 | Potato | nucleus | 40.67 | 42.51 |
| Solyc01g102980.2.1 | Tomato | nucleus | 41.0 | 42.41 |
| CDY24844 | Canola | nucleus | 29.33 | 41.9 |
| CDY00105 | Canola | mitochondrion | 13.67 | 41.84 |
| CDY34299 | Canola | nucleus | 31.0 | 41.33 |
| CDY03431 | Canola | nucleus | 30.33 | 40.81 |
| CDX68172 | Canola | mitochondrion | 13.0 | 40.21 |
| CDX85849 | Canola | mitochondrion | 13.0 | 40.21 |
| CDX77960 | Canola | nucleus | 27.0 | 36.99 |
| CDX73775 | Canola | nucleus | 26.0 | 36.28 |
| CDY54719 | Canola | nucleus | 29.0 | 36.1 |
| CDX88760 | Canola | nucleus | 21.67 | 35.91 |
| CDY69628 | Canola | nucleus | 21.33 | 35.75 |
| CDY37252 | Canola | nucleus | 31.0 | 35.63 |
| CDY62531 | Canola | nucleus | 31.0 | 35.36 |
| CDX81284 | Canola | nucleus | 29.67 | 34.9 |
| CDY37827 | Canola | nucleus | 31.0 | 34.19 |
| CDY33960 | Canola | nucleus | 30.33 | 33.83 |
| CDX95914 | Canola | nucleus | 26.0 | 33.77 |
| CDY70550 | Canola | nucleus | 28.67 | 33.46 |
| CDY45419 | Canola | nucleus | 31.67 | 32.99 |
| CDX90679 | Canola | nucleus | 26.67 | 32.92 |
| CDY70108 | Canola | nucleus | 29.0 | 32.83 |
| CDX85886 | Canola | nucleus | 32.0 | 32.65 |
| CDY28566 | Canola | nucleus | 27.33 | 32.16 |
| CDY44079 | Canola | nucleus | 27.33 | 32.16 |
| CDX68137 | Canola | nucleus | 31.67 | 31.99 |
| CDY71124 | Canola | nucleus | 27.33 | 31.91 |
| CDX73152 | Canola | nucleus | 31.33 | 31.44 |
| CDY28987 | Canola | nucleus | 25.67 | 31.43 |
| CDY14559 | Canola | nucleus | 30.67 | 31.4 |
| CDY01760 | Canola | nucleus | 26.67 | 31.25 |
| KXG23238 | Sorghum | nucleus | 33.33 | 30.49 |
| CDX69541 | Canola | nucleus | 26.67 | 30.42 |
| CDY20008 | Canola | nucleus | 28.0 | 29.89 |
| CDY46298 | Canola | cytosol | 8.33 | 29.76 |
| Zm00001d041780_P001 | Maize | nucleus | 33.67 | 28.94 |
| TraesCS4D01G086300.1 | Wheat | nucleus | 36.67 | 28.28 |
| KXG28111 | Sorghum | nucleus | 36.67 | 27.92 |
| Os11t0243300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 38.33 | 27.58 |
| CDY00104 | Canola | nucleus | 28.67 | 27.56 |
| TraesCS4B01G089700.1 | Wheat | nucleus | 36.33 | 27.46 |
| TraesCS4A01G226800.1 | Wheat | nucleus | 36.33 | 27.18 |
| CDX74428 | Canola | nucleus | 28.33 | 26.81 |
| Os12t0208900-00 | Rice | nucleus | 19.33 | 26.13 |
| CDY56033 | Canola | nucleus | 24.0 | 25.99 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 36.33 | 25.95 |
| Zm00001d049000_P001 | Maize | plastid | 36.0 | 25.71 |
| CDX85059 | Canola | nucleus | 20.0 | 25.21 |
| CDX85230 | Canola | nucleus | 28.0 | 24.78 |
| CDX86403 | Canola | nucleus | 27.67 | 24.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | GO:A0A078HV36 | UniProt:A0A078HV36 | EnsemblPlants:CDY41692 | ProteinID:CDY41692 |
| ProteinID:CDY41692.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00073390001 |
| InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 |
| PANTHER:PTHR31948 | PANTHER:PTHR31948:SF19 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI0004EF3861 |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : | : |
Description
BnaC02g34620DBnaC02g34620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV36]
Coordinates
chrLK032503:-:255221..256123
Molecular Weight (calculated)
34347.1 Da
IEP (calculated)
8.432
GRAVY (calculated)
-1.114
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVASQEEHD MPIPINTTHG GHGHMIHRHH DHHHHNPANS THPNPLIVLS NGNGFRQNHE DPDHHNVGYN IMISNNNNKE KHVVNKYKEC LKNHAASTGG
101: HAIDGCGEFM PSGEEGSIEA LTCSACHCHR NFHRREIEGE DKTYFSPYHH NQPQRNPMFH HHHKMTRSPL PQQMIMPLGV ATTTVSNSES EEDIPFQQPP
201: PPYNHGGHNQ KKRLRTKFTQ EQKEKMLSFA ERIGWKMQRQ EESVVQKFCQ EIGVRRRVLK VWIHNNKHNL SKKSNNNNVE ISASNNDINK ALTGNRASSS
101: HAIDGCGEFM PSGEEGSIEA LTCSACHCHR NFHRREIEGE DKTYFSPYHH NQPQRNPMFH HHHKMTRSPL PQQMIMPLGV ATTTVSNSES EEDIPFQQPP
201: PPYNHGGHNQ KKRLRTKFTQ EQKEKMLSFA ERIGWKMQRQ EESVVQKFCQ EIGVRRRVLK VWIHNNKHNL SKKSNNNNVE ISASNNDINK ALTGNRASSS
001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
Arabidopsis Description
ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.