Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85228 | Canola | mitochondrion, nucleus | 98.9 | 98.9 |
| AT3G28917.1 | Thale cress | mitochondrion | 96.7 | 88.0 |
| Bra039039.1-P | Field mustard | mitochondrion | 94.51 | 87.76 |
| CDY20009 | Canola | mitochondrion | 94.51 | 87.76 |
| CDY00105 | Canola | mitochondrion | 92.31 | 85.71 |
| KRH18477 | Soybean | cytosol, mitochondrion | 67.03 | 74.39 |
| KRG93529 | Soybean | cytosol, mitochondrion | 72.53 | 68.04 |
| CDX81897 | Canola | mitochondrion | 62.64 | 64.77 |
| CDX83807 | Canola | mitochondrion | 62.64 | 64.77 |
| CDY26722 | Canola | mitochondrion | 61.54 | 63.64 |
| CDY21695 | Canola | mitochondrion | 61.54 | 63.64 |
| CDY19248 | Canola | mitochondrion | 61.54 | 63.64 |
| CDX96695 | Canola | mitochondrion | 60.44 | 62.5 |
| CDX73105 | Canola | mitochondrion | 59.34 | 57.45 |
| CDX96558 | Canola | mitochondrion | 58.24 | 56.38 |
| VIT_14s0108g00810.t01 | Wine grape | cytosol | 79.12 | 55.81 |
| CDX85849 | Canola | mitochondrion | 58.24 | 54.64 |
| CDX68172 | Canola | mitochondrion | 58.24 | 54.64 |
| CDY46298 | Canola | cytosol | 24.18 | 26.19 |
| CDY34299 | Canola | nucleus | 48.35 | 19.56 |
| CDY03431 | Canola | nucleus | 47.25 | 19.28 |
| CDX88950 | Canola | nucleus | 43.96 | 19.05 |
| CDY24844 | Canola | nucleus | 43.96 | 19.05 |
| CDY08945 | Canola | nucleus | 43.96 | 19.05 |
| CDY70108 | Canola | nucleus | 50.55 | 17.36 |
| CDX77960 | Canola | nucleus | 41.76 | 17.35 |
| CDY70550 | Canola | nucleus | 48.35 | 17.12 |
| CDX90679 | Canola | nucleus | 45.05 | 16.87 |
| CDY28987 | Canola | nucleus | 45.05 | 16.73 |
| CDY71124 | Canola | nucleus | 47.25 | 16.73 |
| CDX73775 | Canola | nucleus | 38.46 | 16.28 |
| CDY54719 | Canola | nucleus | 42.86 | 16.18 |
| CDX81284 | Canola | nucleus | 43.96 | 15.69 |
| CDY69628 | Canola | nucleus | 30.77 | 15.64 |
| CDX88760 | Canola | nucleus | 30.77 | 15.47 |
| CDY09363 | Canola | nucleus | 49.45 | 15.1 |
| CDY41692 | Canola | nucleus | 49.45 | 15.0 |
| CDY37252 | Canola | nucleus | 42.86 | 14.94 |
| CDY62531 | Canola | nucleus | 42.86 | 14.83 |
| CDX95914 | Canola | nucleus | 36.26 | 14.29 |
| CDY53549 | Canola | nucleus | 47.25 | 13.69 |
| CDX81638 | Canola | nucleus | 47.25 | 13.65 |
| CDY37827 | Canola | nucleus | 40.66 | 13.6 |
| CDY45257 | Canola | nucleus | 46.15 | 13.5 |
| CDY33960 | Canola | nucleus | 39.56 | 13.38 |
| CDX73152 | Canola | nucleus | 43.96 | 13.38 |
| CDY44079 | Canola | nucleus | 37.36 | 13.33 |
| CDY14559 | Canola | nucleus | 42.86 | 13.31 |
| CDY01760 | Canola | nucleus | 37.36 | 13.28 |
| CDX85886 | Canola | nucleus | 42.86 | 13.27 |
| CDY45419 | Canola | nucleus | 41.76 | 13.19 |
| CDX68137 | Canola | nucleus | 42.86 | 13.13 |
| CDY39311 | Canola | nucleus | 43.96 | 13.07 |
| CDY28566 | Canola | nucleus | 36.26 | 12.94 |
| CDX69541 | Canola | nucleus | 37.36 | 12.93 |
| CDY20008 | Canola | nucleus | 39.56 | 12.81 |
| CDY56033 | Canola | nucleus | 37.36 | 12.27 |
| CDY00104 | Canola | nucleus | 39.56 | 11.54 |
| CDX74428 | Canola | nucleus | 37.36 | 10.73 |
| CDX85230 | Canola | nucleus | 38.46 | 10.32 |
| CDX86403 | Canola | nucleus | 38.46 | 10.17 |
| CDX85059 | Canola | nucleus | 20.88 | 7.98 |
Protein Annotations
| EnsemblPlants:CDX86404 | EnsemblPlantsGene:GSBRNA2T00144539001 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | ProteinID:CDX86404 | ProteinID:CDX86404.1 | SEG:seg |
| TIGRFAMs:TIGR01566 | UniParc:UPI0004EE0773 | MapMan:15.5.3.13 | : | : | : |
Description
BnaA06g31210D
Coordinates
chrLK031845:-:1387797..1388744
Molecular Weight (calculated)
9790.4 Da
IEP (calculated)
7.739
GRAVY (calculated)
-0.585
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MRKRQVVLRR ASPEEPSRSS GVRYGECQKN HAAAVGGYAV DGCREFMASN GEEGSVAALT CAACGCHRSF HRREIETEVV CDCNSPPSTG N
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.