Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016538.1-P | Field mustard | mitochondrion | 100.0 | 100.0 |
| CDY19248 | Canola | mitochondrion | 93.18 | 93.18 |
| CDY26722 | Canola | mitochondrion | 93.18 | 93.18 |
| CDY21695 | Canola | mitochondrion | 93.18 | 93.18 |
| CDX81897 | Canola | mitochondrion | 92.05 | 92.05 |
| CDX83807 | Canola | mitochondrion | 90.91 | 90.91 |
| AT1G18835.1 | Thale cress | mitochondrion | 89.77 | 89.77 |
| KRH63346 | Soybean | cytosol, mitochondrion | 78.41 | 77.53 |
| KRH54551 | Soybean | cytosol, mitochondrion | 78.41 | 77.53 |
| CDX73105 | Canola | mitochondrion | 79.55 | 74.47 |
| CDX68172 | Canola | mitochondrion | 81.82 | 74.23 |
| CDX85849 | Canola | mitochondrion | 81.82 | 74.23 |
| CDX96558 | Canola | mitochondrion | 78.41 | 73.4 |
| KRH56913 | Soybean | cytosol | 64.77 | 72.15 |
| KRH03476 | Soybean | cytosol | 63.64 | 70.89 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 65.91 | 69.88 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 64.77 | 68.67 |
| CDX86404 | Canola | mitochondrion | 62.5 | 60.44 |
| VIT_01s0026g02450.t01 | Wine grape | cytosol | 57.95 | 60.0 |
| CDX85228 | Canola | mitochondrion, nucleus | 61.36 | 59.34 |
| CDY20009 | Canola | mitochondrion | 65.91 | 59.18 |
| CDY00105 | Canola | mitochondrion | 65.91 | 59.18 |
| CDY46298 | Canola | cytosol | 19.32 | 20.24 |
| CDY24844 | Canola | nucleus | 46.59 | 19.52 |
| CDX88950 | Canola | nucleus | 46.59 | 19.52 |
| CDY34299 | Canola | nucleus | 48.86 | 19.11 |
| CDY08945 | Canola | nucleus | 45.45 | 19.05 |
| CDY03431 | Canola | nucleus | 47.73 | 18.83 |
| CDX77960 | Canola | nucleus | 44.32 | 17.81 |
| CDX73775 | Canola | nucleus | 43.18 | 17.67 |
| CDY54719 | Canola | nucleus | 46.59 | 17.01 |
| CDX81284 | Canola | nucleus | 47.73 | 16.47 |
| CDX90679 | Canola | nucleus | 45.45 | 16.46 |
| CDY28987 | Canola | nucleus | 45.45 | 16.33 |
| CDY37252 | Canola | nucleus | 46.59 | 15.71 |
| CDY62531 | Canola | nucleus | 46.59 | 15.59 |
| CDY70550 | Canola | nucleus | 44.32 | 15.18 |
| CDY70108 | Canola | nucleus | 45.45 | 15.09 |
| CDY69628 | Canola | nucleus | 30.68 | 15.08 |
| CDX88760 | Canola | nucleus | 30.68 | 14.92 |
| CDX95914 | Canola | nucleus | 38.64 | 14.72 |
| CDY09363 | Canola | nucleus | 48.86 | 14.43 |
| CDY41692 | Canola | nucleus | 48.86 | 14.33 |
| CDY45419 | Canola | nucleus | 46.59 | 14.24 |
| CDX69541 | Canola | nucleus | 42.05 | 14.07 |
| CDY01760 | Canola | nucleus | 40.91 | 14.06 |
| CDY14559 | Canola | nucleus | 46.59 | 13.99 |
| CDY37827 | Canola | nucleus | 43.18 | 13.97 |
| CDY33960 | Canola | nucleus | 42.05 | 13.75 |
| CDX73152 | Canola | nucleus | 46.59 | 13.71 |
| CDY71124 | Canola | nucleus | 39.77 | 13.62 |
| CDY20008 | Canola | nucleus | 43.18 | 13.52 |
| CDY28566 | Canola | nucleus | 38.64 | 13.33 |
| CDY44079 | Canola | nucleus | 38.64 | 13.33 |
| CDX85886 | Canola | nucleus | 44.32 | 13.27 |
| CDX68137 | Canola | nucleus | 44.32 | 13.13 |
| CDY53549 | Canola | nucleus | 46.59 | 13.06 |
| CDX81638 | Canola | nucleus | 46.59 | 13.02 |
| CDY56033 | Canola | nucleus | 40.91 | 13.0 |
| CDY39311 | Canola | nucleus | 44.32 | 12.75 |
| CDY45257 | Canola | nucleus | 44.32 | 12.54 |
| CDY00104 | Canola | nucleus | 44.32 | 12.5 |
| CDX74428 | Canola | nucleus | 40.91 | 11.36 |
| CDX85230 | Canola | nucleus | 43.18 | 11.21 |
| CDX86403 | Canola | nucleus | 43.18 | 11.05 |
| CDX85059 | Canola | nucleus | 23.86 | 8.82 |
Protein Annotations
| EnsemblPlants:CDX96695 | EnsemblPlantsGene:GSBRNA2T00102909001 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | ProteinID:CDX96695 | ProteinID:CDX96695.1 | SEG:seg |
| TIGRFAMs:TIGR01566 | UniParc:UPI0002546F38 | MapMan:15.5.3.13 | : | : | : |
Description
BnaA08g22380D
Coordinates
chrLK031895:+:615015..615281
Molecular Weight (calculated)
9845.5 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.749
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKRQVVIKQ RKNSYTTTSS SSNVRYIECQ KNHAANIGGY AVDGCREFIA SGGEGTDDAL TCAACRCHRN FHRREVETEV VCEYSPPN
1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN
Arabidopsis Description
MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.