Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 38.82 | 67.35 |
| KRH03476 | Soybean | cytosol | 60.0 | 64.56 |
| KRH56913 | Soybean | cytosol | 60.0 | 64.56 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 58.82 | 60.24 |
| CDX83807 | Canola | mitochondrion | 62.35 | 60.23 |
| CDX81897 | Canola | mitochondrion | 61.18 | 59.09 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 57.65 | 59.04 |
| KRH63346 | Soybean | cytosol, mitochondrion | 61.18 | 58.43 |
| KRH54551 | Soybean | cytosol, mitochondrion | 61.18 | 58.43 |
| Bra016538.1-P | Field mustard | mitochondrion | 60.0 | 57.95 |
| AT1G18835.1 | Thale cress | mitochondrion | 60.0 | 57.95 |
| CDY26722 | Canola | mitochondrion | 60.0 | 57.95 |
| CDY19248 | Canola | mitochondrion | 60.0 | 57.95 |
| CDX96695 | Canola | mitochondrion | 60.0 | 57.95 |
| Bra025688.1-P | Field mustard | mitochondrion | 60.0 | 57.95 |
| VIT_14s0108g00760.t01 | Wine grape | mitochondrion | 62.35 | 55.79 |
| VIT_14s0108g00810.t01 | Wine grape | cytosol | 65.88 | 43.41 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 52.94 | 33.33 |
| VIT_17s0000g00810.t01 | Wine grape | nucleus | 32.94 | 18.06 |
| VIT_00s0199g00250.t01 | Wine grape | nucleus | 45.88 | 15.98 |
| VIT_18s0001g07140.t01 | Wine grape | nucleus | 41.18 | 15.22 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 47.06 | 14.23 |
| VIT_18s0117g00270.t01 | Wine grape | nucleus | 44.71 | 13.97 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 47.06 | 12.66 |
| VIT_14s0108g00750.t01 | Wine grape | nucleus | 43.53 | 10.42 |
| VIT_04s0023g01880.t01 | Wine grape | nucleus | 48.24 | 9.47 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 22.35 | 8.26 |
| VIT_07s0130g00240.t01 | Wine grape | nucleus | 15.29 | 6.57 |
| VIT_10s0042g00210.t01 | Wine grape | nucleus | 5.88 | 2.49 |
Protein Annotations
| EntrezGene:100246551 | wikigene:100246551 | MapMan:15.5.3.13 | EMBL:AM431514 | ProteinID:CAN64767 | ProteinID:CAN64767.1 |
| ProteinID:CCB56545 | ProteinID:CCB56545.1 | UniProt:F6HPR4 | EMBL:FN596002 | InterPro:IPR006456 | EntrezGene:LOC100246551 |
| wikigene:LOC100246551 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| TIGR:TC61750 | TIGRFAMs:TIGR01566 | UniParc:UPI0001982A9B | ArrayExpress:VIT_01s0026g02450 | EnsemblPlantsGene:VIT_01s0026g02450 | EnsemblPlants:VIT_01s0026g02450.t01 |
| unigene:Vvi.14790 | RefSeq:XP_002275548 | RefSeq:XP_002275548.1 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : |
Description
No Description!
Coordinates
chr1:+:12038069..12038639
Molecular Weight (calculated)
9117.7 Da
IEP (calculated)
8.614
GRAVY (calculated)
-0.722
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKCEVVIKG AKEQGKSSSS SSVTLKSISY GQCQKNHAAK SGGYAVDGCR EFMASGEEGT REALKCAACG CHRNFHRREV DADQS
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.