Factsheet for VIT_10s0042g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0108g00750.t01	Wine grape	nucleus	84.08	47.61
VIT_01s0026g02460.t01	Wine grape	nucleus	44.28	38.7
VIT_07s0130g00240.t01	Wine grape	nucleus	26.37	26.77
VIT_00s0199g00250.t01	Wine grape	nucleus	29.85	24.59
VIT_17s0000g00810.t01	Wine grape	nucleus	18.91	24.52
VIT_18s0001g07140.t01	Wine grape	nucleus	27.36	23.91
VIT_12s0035g01880.t01	Wine grape	nucleus	25.87	18.51
VIT_18s0117g00270.t01	Wine grape	nucleus	22.89	16.91
VIT_18s0001g12580.t01	Wine grape	nucleus	26.37	16.77
VIT_04s0023g01880.t01	Wine grape	nucleus	25.87	12.01
VIT_14s0108g00760.t01	Wine grape	mitochondrion	3.48	7.37
VIT_17s0000g06200.t01	Wine grape	cytosol	1.49	6.12
VIT_01s0026g02450.t01	Wine grape	cytosol	2.49	5.88
VIT_14s0108g00810.t01	Wine grape	cytosol	2.99	4.65
KRH01171	Soybean	mitochondrion	1.99	4.55
VIT_08s0056g01130.t01	Wine grape	nucleus	2.49	3.7

Protein Annotations

ArrayExpress:VIT_10s0042g00210	EMBL:FN595766	EnsemblPlants:VIT_10s0042g00210.t01	EnsemblPlantsGene:VIT_10s0042g00210	Gene3D:1.10.10.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	PANTHER:PTHR31948
PANTHER:PTHR31948:SF29	ProteinID:CCB52084	ProteinID:CCB52084.1	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01565
UniParc:UPI000210822D	UniProt:F6HIN8	MapMan:15.5.3.13	:	:	:

Description

No Description!

Coordinates

chr10:+:13049537..13050269

Molecular Weight (calculated)

22553.7 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.858

Length

201 amino acids

Sequence
(BLAST)

001: MKHLYHKPVN FGWSDAKLQI IIHAKLLIVD LELQTHSQIL PHQPPPPPPR PRSPNSPSPP PISSSYYPSA PHMLLALSAG ISGPPENAPP ISSSPASGAN
101: GRKRFRTKFS QGQKKKMFEF AERVGWKMQK RDEELVAEFC NEVGVDKGVL KVWMHNNKNT FGKRDVNGSR TSLDENNENN ENTPHTMETI HHTPTHNHTN
201: P

Best Arabidopsis Sequence Match ( AT5G39760.1 )
(BLAST)

001: MMDMTPTITT TTTPTPKSPE PESETPTRIQ PAKPISFSNG IIKRHHHHHH PLLFTYKECL KNHAAALGGH ALDGCGEFMP SPSSISSDPT SLKCAACGCH
101: RNFHRRDPDN NNDSSQIPPP PSTAVEYQPH HRHHPPPPPP PPPPRSPNSA SPPPISSSYM LLSLSGTNNN NNNLASFSDL NFSAGNNHHH HHQHTLHGSR
201: KRFRTKFSQF QKEKMHEFAE RVGWKMQKRD EDDVRDFCRQ IGVDKSVLKV WMHNNKNTFN RRDIAGNEIR QIDNGGGNHT PILAGEINNH NNGHHGVGGG
301: GELHQSVSSG GGGGGFDSDS GGANGGNVNG SSSS

Arabidopsis Description

ZHD10Zinc-finger homeodomain protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIW9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.