Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61182 | Soybean | cytosol | 85.28 | 85.67 |
| KRH05805 | Soybean | endoplasmic reticulum | 62.32 | 62.7 |
| KRH15224 | Soybean | endoplasmic reticulum | 57.47 | 54.78 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 49.05 | 47.93 |
| PGSC0003DMT400013161 | Potato | cytosol | 42.7 | 44.66 |
| Solyc04g080240.2.1 | Tomato | cytosol | 42.59 | 44.16 |
| AT5G42950.1 | Thale cress | cytosol | 38.63 | 40.43 |
| Bra027468.1-P | Field mustard | nucleus | 36.45 | 39.09 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 31.66 | 35.86 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 33.39 | 35.26 |
| EER95850 | Sorghum | cytosol | 29.1 | 31.67 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 29.21 | 30.75 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 29.1 | 30.69 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 28.99 | 30.57 |
| Zm00001d018770_P003 | Maize | cytosol | 28.26 | 29.49 |
| CDY71257 | Canola | cytosol, nucleus | 8.64 | 28.97 |
| Os07t0137900-01 | Rice | cytosol | 17.28 | 27.56 |
| OQU90902 | Sorghum | nucleus | 16.72 | 24.39 |
| Zm00001d034263_P004 | Maize | cytosol | 13.32 | 24.21 |
| KRG94582 | Soybean | cytosol | 15.11 | 16.77 |
| KRH06906 | Soybean | cytosol | 14.77 | 16.4 |
Protein Annotations
| EntrezGene:100815978 | MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | EMBL:ACUP02003394 | EnsemblPlantsGene:GLYMA_06G032600 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GYF |
| InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | UniProt:K7KSU9 | EnsemblPlants:KRH51860 | ProteinID:KRH51860 |
| ProteinID:KRH51860.1 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI000296D717 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:2522059..2530719
Molecular Weight (calculated)
197860.0 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.821
Length
1794 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADRASASTR LHISAAPPFP ISKDFHGPDN PIPLSPQWLL PKPGESKPAI GTVENHVIST PPNGNRSETV KTSGNGEDVN DDHKRKDVFR PSMLDSKSGC
0101: RERWRDEERD TKSSIHKNRW RNGDKNLSDT QRMDQRTENP STRHFGEARR GTSDRWNDSG NRDTNFEQRH ESKWNTRWGP DDKAPEGLRE KRSSPGKDSD
0201: RHVDKGLPNI SNLVKDEKEG DHYRPWRRNS SQSRGRVEPT HHQNGMPNKQ VSALPYGWGH GEDTPPVIAF GRARLGSGGS SINSTYMHSQ YPGTLLDKVE
0301: SEQGEARPFR YSRTNLLDVY RVADMHTSRK LVEFVQVPSV TQDEPLEPLA LCSPNSEELS VLKDIDKGEI ISSSAPQLPK DGRNSTEFTH SRRMKPVNAP
0401: FQDRVEDNDS YRMADEVPSN KESTFEESHS AHHGATWRGT PLGEHAGTLM HDGRDVSSDI KSRNSDMSWS HQPKNTHAQW EHNLDYLSET RDVTKWQSSG
0501: DPIKRQLSGI LDSEFESRRI QQICPEELSL FYKDPQGRIQ GPFKGIDIIS WFEAGYFGID LPVRLENAAS DSPWLQLGDA MPHLRAKARP PPGFSAAKLD
0601: SSEASGRPYS STFGNMHSGL SEVEMLRNDS MHRSSTTEAE NRFLESLMSG SKSSSPLSSL TLSEGLQGFL GNDSGNLGPS GVDSGINLYL LAKRMALERQ
0701: RSLPNAYPYW PGRDAAPLPP KSDIFPDASP HSNMLSSLSD NSRLLQSQSS ELMSIIQGLS DRSSTCLNSG IAGWPNFLLQ GGLDPPIQNK IDLQGGLDPP
0801: IHDQNYVQMP FGIQQQRLQT LNQLPLNNLI AQNSDIPSSI LTAEKLLSSG LSQDPEMLNM LQQQHLLQLH SQAAVAPSQQ LHSQAAAPSQ TMPLLDKLLL
0901: LKQQQQQEEQ QLLLRQQQQL LSQVLQEHQS HQRFGNLSYQ QFQGGGIPLG NLHVNLSQIQ PPKEIFPMSS QTPIPSVQGE LTTNSLDLPL QVSQDTSYNI
1001: SSESSAQLSD QLFENIGDQK SWSATLPEQI NDNYQKETLP VSASVEGSLL LEQSRAKEEP GNAQKLLPFS DYTAKTLEQM PDNTCRNDDT LVSATSESDE
1101: NSQPIQCVTP AVDMSSAASC GTELPLVSQL SEDVEIKSDS LEEHHGGRES SKIDPSVVDV RSIEVREPKK TAEKKSKKQK SSKSQSSGQA KGLLKNVPLQ
1201: QSKKSEPEKP NYSEANKGEP AHETFMQQTK GKDKQSATAT AETDDNQEVS GLPTNIPGSN TKTVIENELK AVSSVATQNT ELPSARAWKP APGFKAKSLL
1301: EIQLEEQKKS LTEKLVSEVA TPVNSMSSTT PWVGVVANPD SMKVSNDGHR EAENTEYLAK AEKSQNSKSK KSPLHDLLAE DLVPKSSERD GKVPDSMLPS
1401: QNIAVHSKLV DDGDFIEAKD TKRSRKKSAK LKSSGAKVSM PVASSEVPIS PIHIEKVKSS RSVQQEKEQL PSIPSGPSLG DFVLWKGEPT SPSPPPAWTT
1501: DSARIPKPTS LRDILKEQEK KSSAVLPNQL PTPQKSQTAQ AARSSGSSRP ISASSPSKTA PSSQINSQAS LSKYRGDDDM FWGPVEQSKQ ENKQSNFPQL
1601: ARQGSWGSKS VPMKGNSPGS LSRQKSGSGK PTEQSLSSSP ASSQSLLKLK KDAMTKNSEA MDFRVWCENE CARLIGTKDT SFLEFCLKQT RSEAEIFLTE
1701: NLGLYDHDHE FIDKFLNYMD LLPSDVLEIA FQTVNDRKVD ANTDVLELGY TDGSFSKVGK KKGGNKGKKV SSSVLGFNVV SNRIMMGEIQ TVED
0101: RERWRDEERD TKSSIHKNRW RNGDKNLSDT QRMDQRTENP STRHFGEARR GTSDRWNDSG NRDTNFEQRH ESKWNTRWGP DDKAPEGLRE KRSSPGKDSD
0201: RHVDKGLPNI SNLVKDEKEG DHYRPWRRNS SQSRGRVEPT HHQNGMPNKQ VSALPYGWGH GEDTPPVIAF GRARLGSGGS SINSTYMHSQ YPGTLLDKVE
0301: SEQGEARPFR YSRTNLLDVY RVADMHTSRK LVEFVQVPSV TQDEPLEPLA LCSPNSEELS VLKDIDKGEI ISSSAPQLPK DGRNSTEFTH SRRMKPVNAP
0401: FQDRVEDNDS YRMADEVPSN KESTFEESHS AHHGATWRGT PLGEHAGTLM HDGRDVSSDI KSRNSDMSWS HQPKNTHAQW EHNLDYLSET RDVTKWQSSG
0501: DPIKRQLSGI LDSEFESRRI QQICPEELSL FYKDPQGRIQ GPFKGIDIIS WFEAGYFGID LPVRLENAAS DSPWLQLGDA MPHLRAKARP PPGFSAAKLD
0601: SSEASGRPYS STFGNMHSGL SEVEMLRNDS MHRSSTTEAE NRFLESLMSG SKSSSPLSSL TLSEGLQGFL GNDSGNLGPS GVDSGINLYL LAKRMALERQ
0701: RSLPNAYPYW PGRDAAPLPP KSDIFPDASP HSNMLSSLSD NSRLLQSQSS ELMSIIQGLS DRSSTCLNSG IAGWPNFLLQ GGLDPPIQNK IDLQGGLDPP
0801: IHDQNYVQMP FGIQQQRLQT LNQLPLNNLI AQNSDIPSSI LTAEKLLSSG LSQDPEMLNM LQQQHLLQLH SQAAVAPSQQ LHSQAAAPSQ TMPLLDKLLL
0901: LKQQQQQEEQ QLLLRQQQQL LSQVLQEHQS HQRFGNLSYQ QFQGGGIPLG NLHVNLSQIQ PPKEIFPMSS QTPIPSVQGE LTTNSLDLPL QVSQDTSYNI
1001: SSESSAQLSD QLFENIGDQK SWSATLPEQI NDNYQKETLP VSASVEGSLL LEQSRAKEEP GNAQKLLPFS DYTAKTLEQM PDNTCRNDDT LVSATSESDE
1101: NSQPIQCVTP AVDMSSAASC GTELPLVSQL SEDVEIKSDS LEEHHGGRES SKIDPSVVDV RSIEVREPKK TAEKKSKKQK SSKSQSSGQA KGLLKNVPLQ
1201: QSKKSEPEKP NYSEANKGEP AHETFMQQTK GKDKQSATAT AETDDNQEVS GLPTNIPGSN TKTVIENELK AVSSVATQNT ELPSARAWKP APGFKAKSLL
1301: EIQLEEQKKS LTEKLVSEVA TPVNSMSSTT PWVGVVANPD SMKVSNDGHR EAENTEYLAK AEKSQNSKSK KSPLHDLLAE DLVPKSSERD GKVPDSMLPS
1401: QNIAVHSKLV DDGDFIEAKD TKRSRKKSAK LKSSGAKVSM PVASSEVPIS PIHIEKVKSS RSVQQEKEQL PSIPSGPSLG DFVLWKGEPT SPSPPPAWTT
1501: DSARIPKPTS LRDILKEQEK KSSAVLPNQL PTPQKSQTAQ AARSSGSSRP ISASSPSKTA PSSQINSQAS LSKYRGDDDM FWGPVEQSKQ ENKQSNFPQL
1601: ARQGSWGSKS VPMKGNSPGS LSRQKSGSGK PTEQSLSSSP ASSQSLLKLK KDAMTKNSEA MDFRVWCENE CARLIGTKDT SFLEFCLKQT RSEAEIFLTE
1701: NLGLYDHDHE FIDKFLNYMD LLPSDVLEIA FQTVNDRKVD ANTDVLELGY TDGSFSKVGK KKGGNKGKKV SSSVLGFNVV SNRIMMGEIQ TVED
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.