Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G255000.2 | Wheat | nucleus | 97.65 | 97.82 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 96.07 | 96.24 |
| EER95850 | Sorghum | cytosol | 60.15 | 62.2 |
| Zm00001d018770_P003 | Maize | cytosol | 56.92 | 56.43 |
| Os07t0137900-01 | Rice | cytosol | 37.09 | 56.18 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 35.21 | 37.88 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 36.91 | 37.02 |
| PGSC0003DMT400013161 | Potato | cytosol | 33.1 | 32.89 |
| Solyc04g080240.2.1 | Tomato | cytosol | 33.1 | 32.6 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 35.04 | 32.52 |
| KRH05805 | Soybean | endoplasmic reticulum | 33.98 | 32.47 |
| KRH15224 | Soybean | endoplasmic reticulum | 34.57 | 31.3 |
| KRH61182 | Soybean | cytosol | 31.98 | 30.52 |
| AT5G42950.1 | Thale cress | cytosol | 30.63 | 30.46 |
| Bra027468.1-P | Field mustard | nucleus | 29.69 | 30.25 |
| KRH51860 | Soybean | cytosol | 30.75 | 29.21 |
| CDY71257 | Canola | cytosol, nucleus | 7.98 | 25.42 |
| CDY32971 | Canola | nucleus | 28.87 | 23.98 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 14.03 | 15.47 |
Protein Annotations
| MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0051607 | InterPro:GYF | InterPro:GYF-like_dom_sf |
| InterPro:IPR003169 | InterPro:IPR035445 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 |
| SMART:SM00444 | SUPFAM:SSF55277 | EnsemblPlantsGene:TraesCS2B01G267200 | EnsemblPlants:TraesCS2B01G267200.2 | TIGR:cd00072 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:359857941..359867168
Molecular Weight (calculated)
185282.0 Da
IEP (calculated)
6.776
GRAVY (calculated)
-0.818
Length
1704 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAASPDRAND DLCRRLAVDT PPPPQIAKEK QGLDTGMPLS PQWLMKEPSS QGSRSDATKT SGNGEDMDSS VKKKDVFRAS VLDGEAARRD RWRDDEREPN
0101: SGPRWVRWRE TDKEQADTRK VEKWSDDSSK FSVDGRRAPQ ERWGDSSNKE GNYDQRREGK WITRWGSSDK ESENWRDRWG DSGKEGDASR EKGFSQFVAH
0201: GKDGNIHDKD TERDDNISRS WKSSHPVGRG RGDSSYHPSQ ISQKPPSLYG YGRGKPDNEI TGFSGSRGKF TPSSGSTNAG STGSSRPFHL GLLSDRPGGA
0301: SGDRTAFRYS RMKLLDIYRT TSHVTDFKMP FDVCEEGSAF MQEEMLEPSA LFAPTTDEAV ILKAIDKGEI INSGVHQVSK DGSVGKSNPD VVPSKQSKLG
0401: GRDDQPGSAD DLKGETAGSL SGVPGNVDSL RTETPSYVVP QRSRFIGDHR LGPTDFPQQM PNVFDQESKV VGMTGVDELT SPIQPYPNPE NLSLYYKDPQ
0501: GRIQGPFSGA DIIGWFEASY FGIDLLVRVA NAPPDAPFLM LGDVMPHLRA KARPPPGFST TKSTDMLMPE TPPTGKFVSS SSTHSGSAGV GIFNSGPSRN
0601: GGAVEAQNRF LESLMSNGMQ GPSAAMTGGL NEYNSSSFGN IAMAGGEMGN SMNYLLAQQR LLERQKSSQN AVPYWSADGI PAAQAQNKDT ASEVSALHSK
0701: VPSTMADPSR QASQSQNVDL LAMLHSAEKP KAPAGLPPWS NYPESRNVNP NLHVDLTQGP LNMHQNLQNS QQMATAVQQQ NFMPQNQPPL SHLPSEKLLA
0801: EISQDPQLLH MFQQQYLLSQ LQLQSQPPVA PQPQPQLSML DKMILLQQQQ QQQQQQQHQQ LQQRLQLEQQ QLLLQQQHLV SHVAPHGHPN QQLDDPYGSK
0901: HTTLPAGDSM NLGVRTIQEV LEADRILTNH GTPQGSSQAF MSMRGMEGVG TSQSSVPTVP LPHEFFMGAP SKERFPHPQK LGNSASDNTQ LSASMVSTMQ
1001: TEVAERYEEA SGNYQQVGIG KVESKPANIL SLRSTEASSS ALSEAKCFPE TPLNQLSEIM SPHNRVQEIT NTLDAVELTM TTDAKTPDAQ ETKKAEKKKK
1101: QKKKQTAVDV GKGAPNTVSQ HPTLEAEVDA SNQAVTKHGL PDDTDELFWG STARGESSSR AVGPPLGFES YVNLPPKSLP EEYAINRAEW EPSALSEPHA
1201: AASQKGWKPT QGPRPKSLLE IQAEEQLRAQ RVAADSAKIT MPAPPVPSGP WNTMSASSEQ QLGGAGKSLG GQESAGDSRN KRSQLHDLLA EEVLARSSNA
1301: DNENIGNAND VLFPPLSPAV VQSDAPTFDD DDFIEAKDSK KNKKKGTKSK GSAAKAPLPV SSIDSSVMSI PAEKGKSSKQ AKQEKEILPA PPSGPSFGDF
1401: VPWKTDQTNF APAPAWSNDS AKVHKPLSLR DIQREEERRS GVVQQQPPSP TPAKVSVNQR NHGNASSKQA SGSSPSKAVA PVQMSSNPSN RSKSNAEDDL
1501: FWGPSDHSKQ DKKQSEFPSL ASQSKSSMTK DQSSVNRHKS QASKLPLSTA PSANLIGKGK AEAANKQTEA MDFRDWCDSE WSRLTGTNDT SFLEFCIKQS
1601: TAEAEMLLRE NVGSLDRNGQ FIDRFLNYKA FLSTDVIEMA FRAPSNRAPR LNPASAAKGG PSAEAEQDTG GKKKGKKGKK VSAAVLGFNV VSNRIMMGEI
1701: QNVD
0101: SGPRWVRWRE TDKEQADTRK VEKWSDDSSK FSVDGRRAPQ ERWGDSSNKE GNYDQRREGK WITRWGSSDK ESENWRDRWG DSGKEGDASR EKGFSQFVAH
0201: GKDGNIHDKD TERDDNISRS WKSSHPVGRG RGDSSYHPSQ ISQKPPSLYG YGRGKPDNEI TGFSGSRGKF TPSSGSTNAG STGSSRPFHL GLLSDRPGGA
0301: SGDRTAFRYS RMKLLDIYRT TSHVTDFKMP FDVCEEGSAF MQEEMLEPSA LFAPTTDEAV ILKAIDKGEI INSGVHQVSK DGSVGKSNPD VVPSKQSKLG
0401: GRDDQPGSAD DLKGETAGSL SGVPGNVDSL RTETPSYVVP QRSRFIGDHR LGPTDFPQQM PNVFDQESKV VGMTGVDELT SPIQPYPNPE NLSLYYKDPQ
0501: GRIQGPFSGA DIIGWFEASY FGIDLLVRVA NAPPDAPFLM LGDVMPHLRA KARPPPGFST TKSTDMLMPE TPPTGKFVSS SSTHSGSAGV GIFNSGPSRN
0601: GGAVEAQNRF LESLMSNGMQ GPSAAMTGGL NEYNSSSFGN IAMAGGEMGN SMNYLLAQQR LLERQKSSQN AVPYWSADGI PAAQAQNKDT ASEVSALHSK
0701: VPSTMADPSR QASQSQNVDL LAMLHSAEKP KAPAGLPPWS NYPESRNVNP NLHVDLTQGP LNMHQNLQNS QQMATAVQQQ NFMPQNQPPL SHLPSEKLLA
0801: EISQDPQLLH MFQQQYLLSQ LQLQSQPPVA PQPQPQLSML DKMILLQQQQ QQQQQQQHQQ LQQRLQLEQQ QLLLQQQHLV SHVAPHGHPN QQLDDPYGSK
0901: HTTLPAGDSM NLGVRTIQEV LEADRILTNH GTPQGSSQAF MSMRGMEGVG TSQSSVPTVP LPHEFFMGAP SKERFPHPQK LGNSASDNTQ LSASMVSTMQ
1001: TEVAERYEEA SGNYQQVGIG KVESKPANIL SLRSTEASSS ALSEAKCFPE TPLNQLSEIM SPHNRVQEIT NTLDAVELTM TTDAKTPDAQ ETKKAEKKKK
1101: QKKKQTAVDV GKGAPNTVSQ HPTLEAEVDA SNQAVTKHGL PDDTDELFWG STARGESSSR AVGPPLGFES YVNLPPKSLP EEYAINRAEW EPSALSEPHA
1201: AASQKGWKPT QGPRPKSLLE IQAEEQLRAQ RVAADSAKIT MPAPPVPSGP WNTMSASSEQ QLGGAGKSLG GQESAGDSRN KRSQLHDLLA EEVLARSSNA
1301: DNENIGNAND VLFPPLSPAV VQSDAPTFDD DDFIEAKDSK KNKKKGTKSK GSAAKAPLPV SSIDSSVMSI PAEKGKSSKQ AKQEKEILPA PPSGPSFGDF
1401: VPWKTDQTNF APAPAWSNDS AKVHKPLSLR DIQREEERRS GVVQQQPPSP TPAKVSVNQR NHGNASSKQA SGSSPSKAVA PVQMSSNPSN RSKSNAEDDL
1501: FWGPSDHSKQ DKKQSEFPSL ASQSKSSMTK DQSSVNRHKS QASKLPLSTA PSANLIGKGK AEAANKQTEA MDFRDWCDSE WSRLTGTNDT SFLEFCIKQS
1601: TAEAEMLLRE NVGSLDRNGQ FIDRFLNYKA FLSTDVIEMA FRAPSNRAPR LNPASAAKGG PSAEAEQDTG GKKKGKKGKK VSAAVLGFNV VSNRIMMGEI
1701: QNVD
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.