Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95850 | Sorghum | cytosol | 75.51 | 78.76 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 56.43 | 57.03 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 56.43 | 56.92 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 55.44 | 56.03 |
| Os07t0137900-01 | Rice | cytosol | 32.64 | 49.87 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 32.52 | 35.29 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 34.26 | 34.67 |
| Zm00001d034263_P004 | Maize | cytosol | 18.96 | 33.03 |
| PGSC0003DMT400013161 | Potato | cytosol | 32.29 | 32.36 |
| Solyc04g080240.2.1 | Tomato | cytosol | 32.23 | 32.02 |
| AT5G42950.1 | Thale cress | cytosol | 31.06 | 31.16 |
| KRH05805 | Soybean | endoplasmic reticulum | 32.29 | 31.13 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 32.98 | 30.88 |
| Bra027468.1-P | Field mustard | nucleus | 29.49 | 30.3 |
| KRH61182 | Soybean | cytosol | 30.08 | 28.95 |
| KRH15224 | Soybean | endoplasmic reticulum | 31.59 | 28.85 |
| KRH51860 | Soybean | cytosol | 29.49 | 28.26 |
| CDY71257 | Canola | cytosol, nucleus | 7.85 | 25.23 |
| CDY32971 | Canola | nucleus | 29.32 | 24.56 |
| Zm00001d011983_P003 | Maize | cytosol | 14.83 | 16.6 |
| Zm00001d011981_P007 | Maize | cytosol | 14.54 | 16.16 |
Protein Annotations
| EntrezGene:103631932 | MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | UniProt:A0A1D6HS02 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 |
| ProteinID:ONM51257.1 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI000843CBB7 | EnsemblPlantsGene:Zm00001d018770 | EnsemblPlants:Zm00001d018770_P003 | EnsemblPlants:Zm00001d018770_T003 | SEG:seg |
Description
GYF domain-containing protein
Coordinates
chr7:+:4766434..4774321
Molecular Weight (calculated)
187997.0 Da
IEP (calculated)
6.226
GRAVY (calculated)
-0.751
Length
1719 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAATPDRANA DLRHGLSVDT PLPPQIARGL VNAYSFDLCT EEKQGLDTEI PLSPQWLMKV GENKDPVSHG IRSDVSKTSG AGEDQGYNTK KKDVFRASVL
0101: DGETGRRDRW RDDEREPNST HRWSRWRETD KEHGDARKAE RWSDDTSKHS VDGRRVPQER WGDSNNKDGS YDQRRENKWT ARWGSNDKES ENWRDRWGDS
0201: GKEGDAYREK GLSHHGKDAN SYEKDDNISR SWKPSYSAGR GRGDLPNYTS QTLPKSPAPS GYGRGKLDND FAKFPNSRGK FTSGTSAISS GSSRPFHLGL
0301: LSDRPGGISD RSAFRYSRLK LLDIYRNCDV TDFKLSVDCL EELSVFMQED VLEPLALSAP VAEEATILKA IDKGDIVNSG VHQASKDGSV GKAGREDQPG
0401: GVEVSGLAGN TDLAARGEPM HPATSTYVVP QRSQFIGEHK LGPSEFGHQI PNFLNQESKT VGMLGFDNFA SPVHSHPNPE NLSLYYKDPQ GQIQGPFSGA
0501: DIIGWFETGY FGIDLLVRPV NAPHDVPFLM LGDVMPHLRA KVRPPPGFAT SKPSDMLAPE TLPTGKFVSS SMQAGSTGIG IFDSGPIRKD NAVEAQNRFL
0601: ESLMSNSARN PSAGTISITG GMNELVSTSF GNISVRGGES GVNLNYLLAQ KGLLERQNSL QNPVSYWTGD APASKVHPMA DTSRQSLQSQ NVDLLAMLQP
0701: KEKPQVPTGN SGLPLCSNYP EASIVNPNLH SGDLAQGALN MRQDMQNSQN IGIGVQQHNL MPQNRPALAQ LPSEKLAEMS QDPQLLNMIR QDLQNSQNIG
0801: IGFQQHNLMP QNRPALAQLP PEKLAEISQD PQMLNMLQQQ YLLSQLQLQS QTPFTPQPPL SMLDKMLLLK QQQQQQQLQQ QQQQLQQQLE QQQKLLLQQQ
0901: LLSQMVPHAH PNQHTDDSYA LKYTSVPSDD STSLGFRRMQ EAIEVDQKFS VHGMQVGQQP SQSIMNFRNM DGIALLQNPV TALPVPHETA VGALPKEDHS
1001: RPGMSEDFAN VDLQLKSTMV HSKLVEVADR NEGFKSHEVD TAAEKNKMSE KELNSGSTII MGSASDEAKN LHEPPLDPKS ENLSSDISGQ VQESNLSAED
1101: TPPGITAAVA TEVKVTDTQE TKKAEKKRKQ KKKQAAADAG KGTSKAVVAQ QQRQETEVDN SDIGGNKHDL TDDTEELFWG SPIRVQNEIL PSKSFPEEHD
1201: ADKAESQFSS LSSDPHSMAS QRAWKQPTQG LRPKSLLEIQ AEEQLRAQKG LTTETAKPAA SVPSISWSGM SISSEQHYGG SNISLGSMES AVERNKRSQL
1301: HDLLAEEVLA RSSIADNENN ANDAFFSPLS PAAVQADAPA LDDNDFIEAK DKKNKKRSAK TKASTVKAPS PVVSFDPPAI SMPSEKGKSA KQAQQELEIL
1401: PAPPSGPSFG DFVLWKSDQT SSVPAPAWSN DSAKVQKPLS LRDIQREQER RTASIQQQAP SPTPAKVAPN QRSHVNASSW QASGPPPSQA VAPVQMSSNA
1501: PSHSRSSAED DLFWGPSEHS KQDTKQSEFP SLLSQSRSSM MKDHSALNRQ KSQAGRLPVP SAATANQSGK GKAEATNKQT EAMDFRDWLD SEWAKLTGTN
1601: DVSFLEFCIK QSTTEAEILL HENIGSLDRN HEFIDKFLNY KAFLSADVIH MAFQAPSSRG DGAGWANPAA AARGGTVIDA ELDGGGKKKG KKGKKVSAAV
1701: LGFNVASNRI MMGEIQNVD
0101: DGETGRRDRW RDDEREPNST HRWSRWRETD KEHGDARKAE RWSDDTSKHS VDGRRVPQER WGDSNNKDGS YDQRRENKWT ARWGSNDKES ENWRDRWGDS
0201: GKEGDAYREK GLSHHGKDAN SYEKDDNISR SWKPSYSAGR GRGDLPNYTS QTLPKSPAPS GYGRGKLDND FAKFPNSRGK FTSGTSAISS GSSRPFHLGL
0301: LSDRPGGISD RSAFRYSRLK LLDIYRNCDV TDFKLSVDCL EELSVFMQED VLEPLALSAP VAEEATILKA IDKGDIVNSG VHQASKDGSV GKAGREDQPG
0401: GVEVSGLAGN TDLAARGEPM HPATSTYVVP QRSQFIGEHK LGPSEFGHQI PNFLNQESKT VGMLGFDNFA SPVHSHPNPE NLSLYYKDPQ GQIQGPFSGA
0501: DIIGWFETGY FGIDLLVRPV NAPHDVPFLM LGDVMPHLRA KVRPPPGFAT SKPSDMLAPE TLPTGKFVSS SMQAGSTGIG IFDSGPIRKD NAVEAQNRFL
0601: ESLMSNSARN PSAGTISITG GMNELVSTSF GNISVRGGES GVNLNYLLAQ KGLLERQNSL QNPVSYWTGD APASKVHPMA DTSRQSLQSQ NVDLLAMLQP
0701: KEKPQVPTGN SGLPLCSNYP EASIVNPNLH SGDLAQGALN MRQDMQNSQN IGIGVQQHNL MPQNRPALAQ LPSEKLAEMS QDPQLLNMIR QDLQNSQNIG
0801: IGFQQHNLMP QNRPALAQLP PEKLAEISQD PQMLNMLQQQ YLLSQLQLQS QTPFTPQPPL SMLDKMLLLK QQQQQQQLQQ QQQQLQQQLE QQQKLLLQQQ
0901: LLSQMVPHAH PNQHTDDSYA LKYTSVPSDD STSLGFRRMQ EAIEVDQKFS VHGMQVGQQP SQSIMNFRNM DGIALLQNPV TALPVPHETA VGALPKEDHS
1001: RPGMSEDFAN VDLQLKSTMV HSKLVEVADR NEGFKSHEVD TAAEKNKMSE KELNSGSTII MGSASDEAKN LHEPPLDPKS ENLSSDISGQ VQESNLSAED
1101: TPPGITAAVA TEVKVTDTQE TKKAEKKRKQ KKKQAAADAG KGTSKAVVAQ QQRQETEVDN SDIGGNKHDL TDDTEELFWG SPIRVQNEIL PSKSFPEEHD
1201: ADKAESQFSS LSSDPHSMAS QRAWKQPTQG LRPKSLLEIQ AEEQLRAQKG LTTETAKPAA SVPSISWSGM SISSEQHYGG SNISLGSMES AVERNKRSQL
1301: HDLLAEEVLA RSSIADNENN ANDAFFSPLS PAAVQADAPA LDDNDFIEAK DKKNKKRSAK TKASTVKAPS PVVSFDPPAI SMPSEKGKSA KQAQQELEIL
1401: PAPPSGPSFG DFVLWKSDQT SSVPAPAWSN DSAKVQKPLS LRDIQREQER RTASIQQQAP SPTPAKVAPN QRSHVNASSW QASGPPPSQA VAPVQMSSNA
1501: PSHSRSSAED DLFWGPSEHS KQDTKQSEFP SLLSQSRSSM MKDHSALNRQ KSQAGRLPVP SAATANQSGK GKAEATNKQT EAMDFRDWLD SEWAKLTGTN
1601: DVSFLEFCIK QSTTEAEILL HENIGSLDRN HEFIDKFLNY KAFLSADVIH MAFQAPSSRG DGAGWANPAA AARGGTVIDA ELDGGGKKKG KKGKKVSAAV
1701: LGFNVASNRI MMGEIQNVD
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.