Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g080240.2.1 | Tomato | cytosol | 90.15 | 89.36 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 53.0 | 49.51 |
| KRH05805 | Soybean | endoplasmic reticulum | 46.47 | 44.7 |
| KRH61182 | Soybean | cytosol | 44.66 | 42.89 |
| KRH51860 | Soybean | cytosol | 44.66 | 42.7 |
| KRH15224 | Soybean | endoplasmic reticulum | 46.3 | 42.19 |
| AT5G42950.1 | Thale cress | cytosol | 41.75 | 41.77 |
| Bra027468.1-P | Field mustard | nucleus | 39.42 | 40.41 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 34.29 | 37.12 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 35.34 | 35.67 |
| EER95850 | Sorghum | cytosol | 33.94 | 35.32 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 32.89 | 33.1 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 32.65 | 32.92 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 32.48 | 32.75 |
| Zm00001d018770_P003 | Maize | cytosol | 32.36 | 32.29 |
| Os07t0137900-01 | Rice | cytosol | 20.29 | 30.93 |
| CDY71257 | Canola | cytosol, nucleus | 8.69 | 27.85 |
| OQU90902 | Sorghum | nucleus | 19.71 | 27.48 |
| Zm00001d034263_P004 | Maize | cytosol | 15.74 | 27.36 |
| PGSC0003DMT400006082 | Potato | cytosol | 8.28 | 19.45 |
| PGSC0003DMT400028024 | Potato | nucleus | 15.51 | 17.23 |
Protein Annotations
| EntrezGene:102585886 | MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | UniProt:M1A2E5 |
| PFAM:PF02213 | EnsemblPlantsGene:PGSC0003DMG400005140 | PGSC:PGSC0003DMG400005140 | EnsemblPlants:PGSC0003DMT400013161 | PFscan:PS50829 | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF36 | SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI000296D96C | RefSeq:XP_006341925.1 | SEG:seg |
Description
GYF domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005140]
Coordinates
chr4:-:69623177..69633121
Molecular Weight (calculated)
188256.0 Da
IEP (calculated)
6.691
GRAVY (calculated)
-0.807
Length
1715 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDKTQFDSR LNQISKDVQG PNDSIPLSPQ WLLPKPGESK AGIVTGDNHL NIHPGYGIRS ELAKFPGMGD DMHDNQKKKD VFRPSVLDME SGRRDRWRDE
0101: ERDTNSAVRR DRWREGDKEI GDGRKVERWS DSSGRHHGEA RRVPGERWTD SGNRENNHDQ RRESKWNTRW GPDEKEADAV REKWSNSSKD AEMHLEKGSP
0201: GLAYHGKDER EGDHYRPWRS TSHGRGRSEP THQAFTPNKQ VPTFSHGRGR EDGATATFSL GRGRALSGGS PMIKGSPHVQ SFGAFSEKAE NVSSPIQYSR
0301: IKMLDVYRVT DMQSCSNFSD VIVQFPSLTQ DEPLEPLALC APSPEELAIL KGIDKGDVLS SGAPQITKDG ALGRNSTEHT QPRRGKLGSR EDLSFDDSRD
0401: ESIDNAKVSV EDSIPHRERE SVNRDPSTPG HSPVPHGGGL WRSSSIGARS HLVANDAREM PTDIRSRTSD IGWLQNQKDK NIERERDLAD PSYPKNEGSK
0501: WQFGDDPILK RQLSAAMDKE LEMRKISQSS PEDLVLYYKD PQGSIQGPFS GSDIIGWFEA GYFGIDLLVR LATAPHDSPF YLLGDVMPHL RAKARPPPGF
0601: GAPKPNADAP GGLNVSSFTK LHAGSSEIDM VKSDMNYKHG STTEAENRFL ESLMAGKVGH APLDKFAQSE AGMPAYGANN IGAVPPMVAE SGDNLYLLAK
0701: KIALERQKSL PKPYPLWPGR DAPSVVPNAD IVQDPLPHSQ RPSMAENIRQ QPHNQNVDLM SLLQGIPDRS AGISSGLSGW SNFSVQGGLE PLQERMEMHQ
0801: GQSMPPQSAF GMQQQRLHPQ NPPMTNLLGA VDNTSSILAT EKLLSSGVQD PQLLNLLQQQ YLLQLQSQAA QGPQQLSVLD KLLMLKQQQQ KQEEQQLILR
0901: QQQQLLSQVL SDQHPHQRFG EQPTLFPPSH NLFSMNTQIQ LPVMEEARAS NFVLPSSISQ DVSQIGSSET SSVHLPHQMF GDFSSQRSWG LVEQIDDVQP
1001: KVPRMATAMI DPSSHTEFTS KHHLEKGSEN NEPPATAEIA SHFPHVEQLE KAVIPPPPAV DNDLHQKNRV ESPPAAAPSE PQIEGDDLRD GLSVTKELKS
1101: VETREVKKSS EKKSRKQKST KGQTSDLVKG ASKSQPSKPL QSDTPIASDS QSVLVDKATA VGPARRESKP ETAIADVVDE YPGQNPPVSQ FNSQVLSGQR
1201: AWKPAPGFKP KSLLEIQEEE QMRAQAEIAT TEVATSLSSL SVSTPWAGFV TNSDHKLVRD TQQDAASTDL NMNNSDVSLN QKSKKSQLHD VLAENTLAKS
1301: SDRERDFPDI TSIQPSVSVN DDDNFIEAKE TKKSRKRSAK SKGAGAKVSV PTAASEVSIA SSPIDKVKSS RQVQPDQEVL PAIPSGPSLG DFVVWKGESA
1401: SSSPIPVPAW STDAGKPSKP TSLRDILKEQ EKKVSSGQQH IPVPTQKSVP NPPARVGGPS WSATGSSPAK ASPIQINSQA GTNSKNKVED DLFWGPIDHP
1501: KQEAKQSEYP QLGSQGSWGS KTTPVKGSPG GSLSRQKSVS GKPVERLLSS SPASAHSSLK GKKDALTKHS EAMDFREWCE NECDRLIGTR DTSFLDFCFK
1601: QSKSEAEILL IENLGSYDPD HEFIDKFLNY KDFLPADVFD MAFQGRNDRK VTGASAKDVT SNSVGFDQGN SSVQDWAPKG GKKKGRKGKK VNLSELGFNV
1701: VSNRIMMGEI QTVED
0101: ERDTNSAVRR DRWREGDKEI GDGRKVERWS DSSGRHHGEA RRVPGERWTD SGNRENNHDQ RRESKWNTRW GPDEKEADAV REKWSNSSKD AEMHLEKGSP
0201: GLAYHGKDER EGDHYRPWRS TSHGRGRSEP THQAFTPNKQ VPTFSHGRGR EDGATATFSL GRGRALSGGS PMIKGSPHVQ SFGAFSEKAE NVSSPIQYSR
0301: IKMLDVYRVT DMQSCSNFSD VIVQFPSLTQ DEPLEPLALC APSPEELAIL KGIDKGDVLS SGAPQITKDG ALGRNSTEHT QPRRGKLGSR EDLSFDDSRD
0401: ESIDNAKVSV EDSIPHRERE SVNRDPSTPG HSPVPHGGGL WRSSSIGARS HLVANDAREM PTDIRSRTSD IGWLQNQKDK NIERERDLAD PSYPKNEGSK
0501: WQFGDDPILK RQLSAAMDKE LEMRKISQSS PEDLVLYYKD PQGSIQGPFS GSDIIGWFEA GYFGIDLLVR LATAPHDSPF YLLGDVMPHL RAKARPPPGF
0601: GAPKPNADAP GGLNVSSFTK LHAGSSEIDM VKSDMNYKHG STTEAENRFL ESLMAGKVGH APLDKFAQSE AGMPAYGANN IGAVPPMVAE SGDNLYLLAK
0701: KIALERQKSL PKPYPLWPGR DAPSVVPNAD IVQDPLPHSQ RPSMAENIRQ QPHNQNVDLM SLLQGIPDRS AGISSGLSGW SNFSVQGGLE PLQERMEMHQ
0801: GQSMPPQSAF GMQQQRLHPQ NPPMTNLLGA VDNTSSILAT EKLLSSGVQD PQLLNLLQQQ YLLQLQSQAA QGPQQLSVLD KLLMLKQQQQ KQEEQQLILR
0901: QQQQLLSQVL SDQHPHQRFG EQPTLFPPSH NLFSMNTQIQ LPVMEEARAS NFVLPSSISQ DVSQIGSSET SSVHLPHQMF GDFSSQRSWG LVEQIDDVQP
1001: KVPRMATAMI DPSSHTEFTS KHHLEKGSEN NEPPATAEIA SHFPHVEQLE KAVIPPPPAV DNDLHQKNRV ESPPAAAPSE PQIEGDDLRD GLSVTKELKS
1101: VETREVKKSS EKKSRKQKST KGQTSDLVKG ASKSQPSKPL QSDTPIASDS QSVLVDKATA VGPARRESKP ETAIADVVDE YPGQNPPVSQ FNSQVLSGQR
1201: AWKPAPGFKP KSLLEIQEEE QMRAQAEIAT TEVATSLSSL SVSTPWAGFV TNSDHKLVRD TQQDAASTDL NMNNSDVSLN QKSKKSQLHD VLAENTLAKS
1301: SDRERDFPDI TSIQPSVSVN DDDNFIEAKE TKKSRKRSAK SKGAGAKVSV PTAASEVSIA SSPIDKVKSS RQVQPDQEVL PAIPSGPSLG DFVVWKGESA
1401: SSSPIPVPAW STDAGKPSKP TSLRDILKEQ EKKVSSGQQH IPVPTQKSVP NPPARVGGPS WSATGSSPAK ASPIQINSQA GTNSKNKVED DLFWGPIDHP
1501: KQEAKQSEYP QLGSQGSWGS KTTPVKGSPG GSLSRQKSVS GKPVERLLSS SPASAHSSLK GKKDALTKHS EAMDFREWCE NECDRLIGTR DTSFLDFCFK
1601: QSKSEAEILL IENLGSYDPD HEFIDKFLNY KDFLPADVFD MAFQGRNDRK VTGASAKDVT SNSVGFDQGN SSVQDWAPKG GKKKGRKGKK VNLSELGFNV
1701: VSNRIMMGEI QTVED
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.