Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g014260.1.1 | |
| Solyc05g051420.1.1 | |
| Solyc07g065490.2.1 | |
| Solyc10g006000.2.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013161 | Potato | cytosol | 89.36 | 90.15 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 51.97 | 48.97 |
| KRH05805 | Soybean | endoplasmic reticulum | 45.95 | 44.59 |
| KRH61182 | Soybean | cytosol | 44.34 | 42.95 |
| KRH51860 | Soybean | cytosol | 44.16 | 42.59 |
| AT5G42950.1 | Thale cress | cytosol | 41.68 | 42.07 |
| KRH15224 | Soybean | endoplasmic reticulum | 45.72 | 42.03 |
| Bra027468.1-P | Field mustard | nucleus | 39.77 | 41.12 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 33.81 | 36.93 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 35.03 | 35.67 |
| EER95850 | Sorghum | cytosol | 33.35 | 35.01 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 32.6 | 33.1 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 32.43 | 32.98 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 32.37 | 32.92 |
| Zm00001d018770_P003 | Maize | cytosol | 32.02 | 32.23 |
| Os07t0137900-01 | Rice | cytosol | 19.83 | 30.49 |
| CDY71257 | Canola | cytosol, nucleus | 8.73 | 28.22 |
| OQU90902 | Sorghum | nucleus | 19.77 | 27.8 |
| Zm00001d034263_P004 | Maize | cytosol | 15.78 | 27.66 |
| Solyc05g015920.2.1 | Tomato | nucleus | 16.18 | 17.94 |
| Solyc05g015930.2.1 | Tomato | cytosol | 15.55 | 17.42 |
Protein Annotations
| EnsemblPlants:Solyc04g080240.2.1 | EnsemblPlantsGene:Solyc04g080240.2 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF36 | PFAM:PF02213 | PFscan:PS50829 | SEG:seg | SMART:SM00444 | SUPFAM:SSF55277 |
| UniParc:UPI0002765669 | UniProt:K4BVA3 | MapMan:26.10.3.1 | : | : | : |
Description
No Description!
Coordinates
chr4:-:64479941..64489818
Molecular Weight (calculated)
189589.0 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.837
Length
1730 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDKTQFDSR HSQISKDVQG PNDSIPLSPQ WLLPKPGESK AGMVTGDNHL NAHPGYPIRS ELAKFPGMSE DMHDNQKKKD VFRPSVLDME SGRRDRWRDE
0101: ERDTNSAVRR DRWREGDKEI GDGRKVERWS DSSGRHHGEV RRGPGERWTD SGNRDSNHDQ RRESKWNTRW GPDEKEADAV REKWSNPSKD AEMHLEKGSP
0201: GLAYHGKDDR EGDHYRPWRS TSHGRGRSEP THQTFTPNKQ VPTFSHGRGR EDGATPTFSL GRGRAVSGGS PMIKGSLHVQ SVGAFSEKAE SVSSPIRYSR
0301: LKMLDVYRGT DMQSCSNFSD VIVQVPSLTQ DEPLEPLALC APSQEELAIL KGIDKGDVLS SGAPQTTKDG TLARNSTEHT QPRRGKLGSR EDLSFDDSRE
0401: ESTDNAKVSV EDSILHREWE SVNRDPSTPG HSPVPHGGGL WRSSSIGARS HLPANDARDL PTDIRSRTSD IGWLQSQKDK NTDRERDLTD PSYTKNEGSK
0501: WQFGDDPILK RQLSAAMDKE LEMRKISQSS PEDLVLYYKD PQGAIQGPFS GSDIIGWFEA GYFGIDLLVR LAAAPHDSPF YLLGDVMPHL RAKARPPPGF
0601: GAPKPNADAP GGLNASSFTK LHAGSSEIDT VNSEMNYKHN STEAENRFLE SLMAGKVGHA PLDKFSQSEG IPAYGANSIG AVPPMGAESG ENLFLLAKKM
0701: ALERQKSLPK PFPLWPGRDA SPVVPNADIV QDPLPHSQRP SMAENIRQQS HNQNVDLMSL LQGIPDRSAG ISSGISGWSN FSVQGGLEPL QERMEMHQGQ
0801: SMPPQSAFGM QQQRLHPQNP PMTNLLGAMD NTSSILATEK LLSSGVQDPQ LLNLLQQQYL LQLQSQAGQG PQQLSVLDKL LMLKQQQQKH EEQQLILRQQ
0901: QQLLSQVLSD QHPHQRFGEQ PYGKLPNPGI SAGNASMDPN HFPPSHNLFP VNTQIQLPVM EEAHPLNFAL PSSISQDVCQ IGSSETSKVH LPHQMFGDSS
1001: SQRSWGLVEQ IDDIQLKVPG MATAMIDPSS HTEFTSKHHL EKGSENNEPP ATTSEIASHF PHVELLEKAA MPPPPAVDND LHQKNRVESP PAAAPSEPQI
1101: EGDLHDGLSD TKELKSVETR EVKKSSEKKS RKQKSTKGQT SDLAKGASKS QPSKPLQSDA PIVSDSPSVS VDKATAVGPG RRESRPEVAI ADVVDEYPGQ
1201: NPPISQSNTQ VQSGQRAWKP APGFKPKSLL EIQEEEQRRA QAEITTTEVA TSLSSLSVST PWAGFVTNSD HKLVRDTQQD AASTDLNMNN SDVSLDQKTK
1301: KSQLHDVLAE NTLAKSSDRE RDFPDMTSVQ PSVSVNDDDN FIEAKETKKS RKRSAKSKGA GAKASMPTAA SEVSVASSPI DKVKSLRQVQ PDQEVLPAIP
1401: SGPSLGDFVV WKGESASSAT IPVPAWSTDS GKPSKPTSLR DILKEQEKKV TSGQQHIPVP TQKSVPNPPA RVGGSSWSSS SPAKAASPIQ INSQAGAYSK
1501: NKVEDDLFWG PIDHPKQESK QSEYPQLGSQ GSWGSKTTPV KGSPGGSLSR QKSVSSKPAE RLLSSSPASG HSSLKGKKDA LTKHSEAMDF REWCENECDR
1601: LIGTRDTSFL DFCFKQSKSE AEMLLIENLG SYDPDHEFID KFLNYKDFLP ADVFDMAFQG RNDRKVTGAS AKNVTSNSVG FDQGNSSVQD WASKGGKKKG
1701: KKGKKVNLSE LGFNVVSNRI MMGEIQTVED
0101: ERDTNSAVRR DRWREGDKEI GDGRKVERWS DSSGRHHGEV RRGPGERWTD SGNRDSNHDQ RRESKWNTRW GPDEKEADAV REKWSNPSKD AEMHLEKGSP
0201: GLAYHGKDDR EGDHYRPWRS TSHGRGRSEP THQTFTPNKQ VPTFSHGRGR EDGATPTFSL GRGRAVSGGS PMIKGSLHVQ SVGAFSEKAE SVSSPIRYSR
0301: LKMLDVYRGT DMQSCSNFSD VIVQVPSLTQ DEPLEPLALC APSQEELAIL KGIDKGDVLS SGAPQTTKDG TLARNSTEHT QPRRGKLGSR EDLSFDDSRE
0401: ESTDNAKVSV EDSILHREWE SVNRDPSTPG HSPVPHGGGL WRSSSIGARS HLPANDARDL PTDIRSRTSD IGWLQSQKDK NTDRERDLTD PSYTKNEGSK
0501: WQFGDDPILK RQLSAAMDKE LEMRKISQSS PEDLVLYYKD PQGAIQGPFS GSDIIGWFEA GYFGIDLLVR LAAAPHDSPF YLLGDVMPHL RAKARPPPGF
0601: GAPKPNADAP GGLNASSFTK LHAGSSEIDT VNSEMNYKHN STEAENRFLE SLMAGKVGHA PLDKFSQSEG IPAYGANSIG AVPPMGAESG ENLFLLAKKM
0701: ALERQKSLPK PFPLWPGRDA SPVVPNADIV QDPLPHSQRP SMAENIRQQS HNQNVDLMSL LQGIPDRSAG ISSGISGWSN FSVQGGLEPL QERMEMHQGQ
0801: SMPPQSAFGM QQQRLHPQNP PMTNLLGAMD NTSSILATEK LLSSGVQDPQ LLNLLQQQYL LQLQSQAGQG PQQLSVLDKL LMLKQQQQKH EEQQLILRQQ
0901: QQLLSQVLSD QHPHQRFGEQ PYGKLPNPGI SAGNASMDPN HFPPSHNLFP VNTQIQLPVM EEAHPLNFAL PSSISQDVCQ IGSSETSKVH LPHQMFGDSS
1001: SQRSWGLVEQ IDDIQLKVPG MATAMIDPSS HTEFTSKHHL EKGSENNEPP ATTSEIASHF PHVELLEKAA MPPPPAVDND LHQKNRVESP PAAAPSEPQI
1101: EGDLHDGLSD TKELKSVETR EVKKSSEKKS RKQKSTKGQT SDLAKGASKS QPSKPLQSDA PIVSDSPSVS VDKATAVGPG RRESRPEVAI ADVVDEYPGQ
1201: NPPISQSNTQ VQSGQRAWKP APGFKPKSLL EIQEEEQRRA QAEITTTEVA TSLSSLSVST PWAGFVTNSD HKLVRDTQQD AASTDLNMNN SDVSLDQKTK
1301: KSQLHDVLAE NTLAKSSDRE RDFPDMTSVQ PSVSVNDDDN FIEAKETKKS RKRSAKSKGA GAKASMPTAA SEVSVASSPI DKVKSLRQVQ PDQEVLPAIP
1401: SGPSLGDFVV WKGESASSAT IPVPAWSTDS GKPSKPTSLR DILKEQEKKV TSGQQHIPVP TQKSVPNPPA RVGGSSWSSS SPAKAASPIQ INSQAGAYSK
1501: NKVEDDLFWG PIDHPKQESK QSEYPQLGSQ GSWGSKTTPV KGSPGGSLSR QKSVSSKPAE RLLSSSPASG HSSLKGKKDA LTKHSEAMDF REWCENECDR
1601: LIGTRDTSFL DFCFKQSKSE AEMLLIENLG SYDPDHEFID KFLNYKDFLP ADVFDMAFQG RNDRKVTGAS AKNVTSNSVG FDQGNSSVQD WASKGGKKKG
1701: KKGKKVNLSE LGFNVVSNRI MMGEIQTVED
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.