Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90902 | Sorghum | nucleus | 64.24 | 51.54 |
| Zm00001d018770_P003 | Maize | cytosol | 33.03 | 18.96 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 28.17 | 17.55 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 28.57 | 16.6 |
| CDY71257 | Canola | cytosol, nucleus | 8.92 | 16.45 |
| Solyc04g080240.2.1 | Tomato | cytosol | 27.66 | 15.78 |
| PGSC0003DMT400013161 | Potato | cytosol | 27.36 | 15.74 |
| Bra027468.1-P | Field mustard | nucleus | 25.53 | 15.06 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 27.66 | 14.87 |
| AT5G42950.1 | Thale cress | cytosol | 25.13 | 14.47 |
| KRH05805 | Soybean | endoplasmic reticulum | 25.63 | 14.19 |
| KRH61182 | Soybean | cytosol | 25.53 | 14.11 |
| KRH15224 | Soybean | endoplasmic reticulum | 26.14 | 13.71 |
| KRH51860 | Soybean | cytosol | 24.21 | 13.32 |
| CDY32971 | Canola | nucleus | 24.62 | 11.84 |
| Zm00001d011983_P003 | Maize | cytosol | 14.18 | 9.11 |
| Zm00001d011981_P007 | Maize | cytosol | 13.98 | 8.92 |
Protein Annotations
| EnsemblPlants:Zm00001d034263_P004 | EnsemblPlants:Zm00001d034263_T004 | EnsemblPlantsGene:Zm00001d034263 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF36 | PFAM:PF02213 | PFscan:PS50829 | ProteinID:ONM09898.1 | SEG:seg | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI00084298F6 | UniProt:A0A1D6L6G4 | MapMan:35.2 | : | : |
Description
umc161aGYF domain-containing protein
Coordinates
chr1:+:288276443..288289645
Molecular Weight (calculated)
107589.0 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.575
Length
987 amino acids
Sequence
(BLAST)
(BLAST)
001: MPINDIGNNE ISSLWQEDPM DPLALIAPNA EEAVILKGIE KGDITNSLAQ ACKDGSDDKN IPGVAALEQM KLSGREDQTG NNEEFNGKMT IDIRGILGAA
101: DLREHLKSDK SPPKESESGG GGIHGPCAEF GHQRNALDQG TKVGDGENVN PENLSLYYKD PKGCIQGPFP GYDIIGWFEA GYFGIDLLVR VASAPCDSPF
201: LLLGDVMPHL RAKVRVPPGF SNTKPRSMTD ASHLGSVYLG TSDYGSINKN GCVTEAENYF LEAPVSSKIQ NPRAATNVVT GGMNEWRFVS GEKVNSINHL
301: EVQKVQLETE NTFQIEGDVI SVGESQKKES VQSTSHSTFF PQMVDPSSEA LQPQNINLLS MLLPAEKGQA PTATSGLSLR SNNADSGNLH AGMCGIDVTQ
401: EILNVHQNLH NSQQIGIDAQ QHYVLTQNQP TLACLNSQIT QPEKFLGGIY HDPQLNINQQ QYLLSELHLQ PLIPGVPEPQ SSLLNNMLQL RQQEQQQQYI
501: SQSIPHDRSM QQLYDSSHGT IHTSLSSGDR MKLCLQRTEE ILDLALKLPG HGKHNLQLHA SVKLRDTGNI GLSESCATAL PLPHEMMGHA AWKECSASLT
601: QGSAVVDALS QKESIVDSPS KKTPSYGSND YSKMTVFEVT GFPQPFQGLQ KPKSVASHIS NEVHEMDISS VHPHSWKPTP GVRAKSVLEI QAEERLETQR
701: EIALENTKVT TTTASGLSIH WVDLVETSGQ QFGDQARPMC DKKNDNISQS NRSHLHDLSA REELIKSNAK AGVIINSADD TSFPPLAPSI TQSDAHIHDG
801: ADFIEFKGTR KISNRGKKPK GSAVKTPASH ANVIPGPATD PAQVREPCSL RNIQVEEEQE SANLQQLVPA SSHAKGPMDQ HIHGNNSSWQ GSESPPSRGN
901: EFLKMTSHVS SHSTPNSEEY LFWEPREHAK QDKPRLQSPP SSVVNTRSTA LDIHKKGKKG TKLSTSALGF KVQSTRIMMG EIAHVDE
101: DLREHLKSDK SPPKESESGG GGIHGPCAEF GHQRNALDQG TKVGDGENVN PENLSLYYKD PKGCIQGPFP GYDIIGWFEA GYFGIDLLVR VASAPCDSPF
201: LLLGDVMPHL RAKVRVPPGF SNTKPRSMTD ASHLGSVYLG TSDYGSINKN GCVTEAENYF LEAPVSSKIQ NPRAATNVVT GGMNEWRFVS GEKVNSINHL
301: EVQKVQLETE NTFQIEGDVI SVGESQKKES VQSTSHSTFF PQMVDPSSEA LQPQNINLLS MLLPAEKGQA PTATSGLSLR SNNADSGNLH AGMCGIDVTQ
401: EILNVHQNLH NSQQIGIDAQ QHYVLTQNQP TLACLNSQIT QPEKFLGGIY HDPQLNINQQ QYLLSELHLQ PLIPGVPEPQ SSLLNNMLQL RQQEQQQQYI
501: SQSIPHDRSM QQLYDSSHGT IHTSLSSGDR MKLCLQRTEE ILDLALKLPG HGKHNLQLHA SVKLRDTGNI GLSESCATAL PLPHEMMGHA AWKECSASLT
601: QGSAVVDALS QKESIVDSPS KKTPSYGSND YSKMTVFEVT GFPQPFQGLQ KPKSVASHIS NEVHEMDISS VHPHSWKPTP GVRAKSVLEI QAEERLETQR
701: EIALENTKVT TTTASGLSIH WVDLVETSGQ QFGDQARPMC DKKNDNISQS NRSHLHDLSA REELIKSNAK AGVIINSADD TSFPPLAPSI TQSDAHIHDG
801: ADFIEFKGTR KISNRGKKPK GSAVKTPASH ANVIPGPATD PAQVREPCSL RNIQVEEEQE SANLQQLVPA SSHAKGPMDQ HIHGNNSSWQ GSESPPSRGN
901: EFLKMTSHVS SHSTPNSEEY LFWEPREHAK QDKPRLQSPP SSVVNTRSTA LDIHKKGKKG TKLSTSALGF KVQSTRIMMG EIAHVDE
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.