Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027468.1-P | Field mustard | nucleus | 64.67 | 79.32 |
| AT5G42950.1 | Thale cress | cytosol | 51.22 | 61.32 |
| CDY71257 | Canola | cytosol, nucleus | 13.21 | 50.65 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 25.15 | 32.58 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 25.63 | 30.96 |
| EER95850 | Sorghum | cytosol | 23.83 | 29.67 |
| Zm00001d018770_P003 | Maize | cytosol | 24.56 | 29.32 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 24.17 | 29.16 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 24.03 | 28.98 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 23.98 | 28.87 |
| Os07t0137900-01 | Rice | cytosol | 14.77 | 26.93 |
| Zm00001d034263_P004 | Maize | cytosol | 11.84 | 24.62 |
| OQU90902 | Sorghum | nucleus | 14.72 | 24.55 |
| CDY66147 | Canola | nucleus | 2.0 | 24.26 |
| CDY66146 | Canola | cytosol | 7.5 | 21.24 |
| CDY11817 | Canola | cytosol | 9.55 | 17.16 |
| CDY11819 | Canola | cytosol | 9.31 | 16.64 |
Protein Annotations
| MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | UniProt:A0A078H522 | EnsemblPlants:CDY32971 | ProteinID:CDY32971 | ProteinID:CDY32971.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0051607 | EnsemblPlantsGene:GSBRNA2T00053186001 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 |
| InterPro:IPR035445 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI0004EE74FF | SEG:seg | : | : | : |
Description
BnaA09g16220DBnaA09g16220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H522]
Coordinates
chrLK032303:-:423400..431984
Molecular Weight (calculated)
223118.0 Da
IEP (calculated)
6.687
GRAVY (calculated)
-0.842
Length
2052 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANSSADSAA DHRSKHLSIN PPHQIFKDVQ GSDNPIPLSP QWLLSKSGKS KAGMGTVEAQ GLHNPSGNGE ETPDNPKKKD VFRPSLLTAE TGRREGWRDE
0101: ERDTFSAARN DRWRNGDKDF GDNKKPRRWT DSGNKDAGTE QRRGPSDRWT DSGNKDAGTE QRRESKWNSR WGPDDKEAEN ARNKWDEAGK DGEIIREKGP
0201: SLPSSDGDHY RPWRPSQGRG RGESLHSQST PNKQGTAFSH SRGRGENTAI FSAGRGRMSS GGSLFTNQSH PPGSASEKGE SGTGEPYHLR YSRMKLLDVY
0301: RIADTVCFEK FPDGFIEVPS LTCEQPSDPL AICAPSSEEV NILDGIEKGK IVSSGAPQIS KDGPSGRNPA EFSQPRRLKP AGSREDMTSA ADVSKEESGE
0401: TRNYPDDKFR PEASHEGYAP FRKGSEVQGN NHVQSPWRQP GERSSRISHD WNDPSADNKL KSSDSVWSHP KDSINHSGSN VMSLPQSKGE SRWQIGEDPA
0501: LRRQPSLVFD REREVRKPMP SSPEELSLFY KDPQGLIQGP FSGSDIIGWF EAGYFGIDLL VRPASAPIDS PFSLLGDVMP HLRAKSGPPP GFSDAKPSQT
0601: IDAAGSPAFP GVGKVHAGMG ETDMLQNDMR YKQVGGTVAE NRFIESLMSG SLNNPSQGSV QGYAVNSSGG LSLPVTDGGA DMYLLAKKLE LERQRSVASP
0701: YSYWPGPESA NLMPRSENVP EVAQQPARSP STDLLSILQG AKDRSAPAVS GPIPAWSHPN QKDDLHHAKS FQTQTSFGVQ QQRQLEQNSP LAGLLGQPIG
0801: NNPAGMLPPD MMLVPGLSQE QQSLNLLQQQ QLLLQMNIQG RQKRTQPSRD LSTPATQAWY KFPGSREDMT SATDVSKEEI GETRNYPDDK FRPEASHEGY
0901: APFRKGSEVQ GNNHVQSPWR QPGERSSRIS HDWNDPSADN KLKSSDTVWS HPKDSINHSG SNVMSLPQSK GESRWQIGED PALRRQPSLV FDREREVRKP
1001: MPSSPEELSL FYKDPQGLIQ GPFSGSDIIG WFEAGYFGID LLVRPASAPI DSPFSLLGDV MPHLRAKSGP PPGFSDAKPS QTTDAAGSPA FPGMGTVHAG
1101: MGETDMLQND MRYKQVGGTV AENRFIESLM SGSLNNPSQG SVQGYAVNSS GGLSLPVTDA GPFSYWPGPE SANLMPRSEN VPEVAQQPAR SPSTDLLSIL
1201: QGAKDRSAPS VSGPIPAWSH PNQKDDLHHA KSFQTQTSFG VQQQRQLEQN SPLAGLLGQP IGNNPAGMLP PDMMLVPGLS QEQQSLNLLQ QQQLLLQMNA
1301: QTPLSSQQQR LLIEKMLLLK HQQKREEQQQ LLRQQQQLFS QVLADQQHPQ QRLGEPSYGQ MSEGGVPTDQ IDGTHKKDLQ SDYERSIPAD YMNSLYSEKP
1401: VLLPASFPNN ESATPETSDS KSLENQTKDV FVGQGETSNE INVEIPPAEV KSNEVSGGRK TSEKKSKKQR GNKQSAEPVK AASKSSLQEA KQPETGIADD
1501: SEIKGKNMNP ADTLIDNDVL MSSEAISVGG ESGVNESSLQ NTRTQPGRAW KPAPGFKPKS LLEIQMEEQR VAQAEALAPK VSTSSGSVGG LASPWGGIVA
1601: NSDPINLRET LAESVKTQAG AVKPESVPAL KGKQSHLLAD DVVAKSVVKE RDVVGSSSND TYTQVTSTNA ESLDDDNFID AKETKKSRKK SARAKNSAAK
1701: TAAHVPAVVD TSLSTSSIEK GKNARIAQQQ LKEDLPAIPS GPSLGDFVLW KEEPVNNPSP AAAWSTGPKK STKPSSLRDI VREQEKMTTS SHPPPSPVPT
1801: TQKPTPQAVP QSSWSRSPSQ AVSQSSLQSK SKGDDDLFWG PVEQTTQESK QGDFPQLSSQ NSWGTKTTPG KGSAGSSLNR QKSVSASSPA SHKGKKEEVT
1901: KLTEANGFRD WCRSECLRLL GSEDTSVLEF CLKLSRSEAE TLLIENLGTV DRDHKFIDKF LNYKDLLPSE VVEIAFQSKG SSSSSVVKSR NNKAAEEEEY
2001: YKAPSANEGF SKVGGGKKKG KKGKKVSLSS SVLGFNVVSN RIMMGEIQSI ED
0101: ERDTFSAARN DRWRNGDKDF GDNKKPRRWT DSGNKDAGTE QRRGPSDRWT DSGNKDAGTE QRRESKWNSR WGPDDKEAEN ARNKWDEAGK DGEIIREKGP
0201: SLPSSDGDHY RPWRPSQGRG RGESLHSQST PNKQGTAFSH SRGRGENTAI FSAGRGRMSS GGSLFTNQSH PPGSASEKGE SGTGEPYHLR YSRMKLLDVY
0301: RIADTVCFEK FPDGFIEVPS LTCEQPSDPL AICAPSSEEV NILDGIEKGK IVSSGAPQIS KDGPSGRNPA EFSQPRRLKP AGSREDMTSA ADVSKEESGE
0401: TRNYPDDKFR PEASHEGYAP FRKGSEVQGN NHVQSPWRQP GERSSRISHD WNDPSADNKL KSSDSVWSHP KDSINHSGSN VMSLPQSKGE SRWQIGEDPA
0501: LRRQPSLVFD REREVRKPMP SSPEELSLFY KDPQGLIQGP FSGSDIIGWF EAGYFGIDLL VRPASAPIDS PFSLLGDVMP HLRAKSGPPP GFSDAKPSQT
0601: IDAAGSPAFP GVGKVHAGMG ETDMLQNDMR YKQVGGTVAE NRFIESLMSG SLNNPSQGSV QGYAVNSSGG LSLPVTDGGA DMYLLAKKLE LERQRSVASP
0701: YSYWPGPESA NLMPRSENVP EVAQQPARSP STDLLSILQG AKDRSAPAVS GPIPAWSHPN QKDDLHHAKS FQTQTSFGVQ QQRQLEQNSP LAGLLGQPIG
0801: NNPAGMLPPD MMLVPGLSQE QQSLNLLQQQ QLLLQMNIQG RQKRTQPSRD LSTPATQAWY KFPGSREDMT SATDVSKEEI GETRNYPDDK FRPEASHEGY
0901: APFRKGSEVQ GNNHVQSPWR QPGERSSRIS HDWNDPSADN KLKSSDTVWS HPKDSINHSG SNVMSLPQSK GESRWQIGED PALRRQPSLV FDREREVRKP
1001: MPSSPEELSL FYKDPQGLIQ GPFSGSDIIG WFEAGYFGID LLVRPASAPI DSPFSLLGDV MPHLRAKSGP PPGFSDAKPS QTTDAAGSPA FPGMGTVHAG
1101: MGETDMLQND MRYKQVGGTV AENRFIESLM SGSLNNPSQG SVQGYAVNSS GGLSLPVTDA GPFSYWPGPE SANLMPRSEN VPEVAQQPAR SPSTDLLSIL
1201: QGAKDRSAPS VSGPIPAWSH PNQKDDLHHA KSFQTQTSFG VQQQRQLEQN SPLAGLLGQP IGNNPAGMLP PDMMLVPGLS QEQQSLNLLQ QQQLLLQMNA
1301: QTPLSSQQQR LLIEKMLLLK HQQKREEQQQ LLRQQQQLFS QVLADQQHPQ QRLGEPSYGQ MSEGGVPTDQ IDGTHKKDLQ SDYERSIPAD YMNSLYSEKP
1401: VLLPASFPNN ESATPETSDS KSLENQTKDV FVGQGETSNE INVEIPPAEV KSNEVSGGRK TSEKKSKKQR GNKQSAEPVK AASKSSLQEA KQPETGIADD
1501: SEIKGKNMNP ADTLIDNDVL MSSEAISVGG ESGVNESSLQ NTRTQPGRAW KPAPGFKPKS LLEIQMEEQR VAQAEALAPK VSTSSGSVGG LASPWGGIVA
1601: NSDPINLRET LAESVKTQAG AVKPESVPAL KGKQSHLLAD DVVAKSVVKE RDVVGSSSND TYTQVTSTNA ESLDDDNFID AKETKKSRKK SARAKNSAAK
1701: TAAHVPAVVD TSLSTSSIEK GKNARIAQQQ LKEDLPAIPS GPSLGDFVLW KEEPVNNPSP AAAWSTGPKK STKPSSLRDI VREQEKMTTS SHPPPSPVPT
1801: TQKPTPQAVP QSSWSRSPSQ AVSQSSLQSK SKGDDDLFWG PVEQTTQESK QGDFPQLSSQ NSWGTKTTPG KGSAGSSLNR QKSVSASSPA SHKGKKEEVT
1901: KLTEANGFRD WCRSECLRLL GSEDTSVLEF CLKLSRSEAE TLLIENLGTV DRDHKFIDKF LNYKDLLPSE VVEIAFQSKG SSSSSVVKSR NNKAAEEEEY
2001: YKAPSANEGF SKVGGGKKKG KKGKKVSLSS SVLGFNVVSN RIMMGEIQSI ED
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.