Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11817 | Canola | cytosol | 88.15 | 88.62 |
| CDY66147 | Canola | nucleus | 11.59 | 78.7 |
| Bra010950.1-P | Field mustard | cytosol | 81.1 | 73.54 |
| CDY66146 | Canola | cytosol | 42.25 | 66.9 |
| AT1G27430.1 | Thale cress | cytosol | 60.63 | 46.65 |
| AT1G24300.1 | Thale cress | cytosol | 59.49 | 45.69 |
| PGSC0003DMT400006082 | Potato | cytosol | 15.24 | 23.97 |
| PGSC0003DMT400028024 | Potato | nucleus | 31.45 | 23.38 |
| Solyc05g015930.2.1 | Tomato | cytosol | 31.1 | 23.12 |
| Solyc05g015920.2.1 | Tomato | nucleus | 31.01 | 22.81 |
| Os01t0924600-01 | Rice | plasma membrane | 8.36 | 21.05 |
| VIT_01s0146g00140.t01 | Wine grape | nucleus | 16.11 | 19.56 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 28.31 | 19.52 |
| KRH06906 | Soybean | cytosol | 26.74 | 19.0 |
| KRG94582 | Soybean | cytosol | 26.74 | 19.0 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 25.52 | 18.96 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 24.83 | 18.92 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 25.35 | 18.91 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 25.17 | 18.65 |
| KXG34019 | Sorghum | cytosol | 24.22 | 18.12 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 24.04 | 17.67 |
| Zm00001d011983_P003 | Maize | cytosol | 23.26 | 17.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.04 | 17.33 |
| Zm00001d011981_P007 | Maize | cytosol | 23.34 | 17.32 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 23.95 | 17.0 |
| CDY71257 | Canola | cytosol, nucleus | 4.88 | 10.47 |
| CDY32971 | Canola | nucleus | 16.64 | 9.31 |
Protein Annotations
| EnsemblPlants:CDY11819 | EnsemblPlantsGene:GSBRNA2T00050083001 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF41 | PFAM:PF02213 | PFscan:PS50829 | ProteinID:CDY11819 | ProteinID:CDY11819.1 | SEG:seg |
| SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI0004EE042B | UniProt:A0A078FFS5 | MapMan:35.2 | : |
Description
BnaC03g57590DBnaC03g57590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFS5]
Coordinates
chrLK032014:+:826662..832906
Molecular Weight (calculated)
126865.0 Da
IEP (calculated)
6.136
GRAVY (calculated)
-0.770
Length
1148 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQLQSGGPA SYRAAPGFGL DKGRSEGRSE GPNIGFTVGR GRARGTWSAF FGAGGFLRNE SVPGKPAPTC RYVRGKLLDL YRNQKPDRMP IDMEDVDSVT
0101: QVALIEPLAF ITPDVEEEES LKGIWKGRIT GSEAHTSPGE ESLAEKSLGE TKVDGALLGV MIGDSVSMHN SNSGIVLLYI LTHIQTTVSV GVLGSHNGGL
0201: CGSSESDQVS HGSHEAVRSA FDKSSMLDAG EPIVTGKLQQ PDIEVNHSEG TLPPEEFMFS YIDPQGVIQG PFIGSDIISW FEQGFFGTDL QVRLATAPEG
0301: TPFQDLGSVM SYLKTESMQA HINDQISELE ETSRKANSEI GLSFAPVAES NGSALGHDDV QMNSKSEAYV KPPHVDDRKI VFPGRAGVSG YGSAKSSTSM
0401: HDALMGVSGH SAIPVESAKV ATQNQNENKL HPFGVLWSEL ESSSTPVDLL PNRSYDTGHD QKYLDQAQNL DHLLTLKLQQ QQQQQQQKIQ LQQQQKIQLQ
0501: QRQLEQEYQL QQKLLQEQQQ SHARNLHFQQ ILQGQTPDSR LGQSHDFHRL NNVDQMLLEQ QLMDELQSSG HRSQNFTPYM EQLAAGNFGQ LPHEGHQNEL
0601: LLEQLLSEQM QSQYRQMQLE ELRHIDPQHG QLQSEPIRSL EYQMMQQEQL MQLATRARHN TLLEEHRHID PLWPSNRNDQ LLGAHPGIHR SHSSAGFRPV
0701: DFHQQQQRPP FEDHFSHLER NLSYQQQLNQ ELFEQGLPFE RSTSLPRNTS GLNLDAGRGL NLSELRDAQM QSSGRLGNST PGFSHQNPHI QLGEPHFSEM
0801: EPRKERWHGA DTQLAGGWAE TQFHRPNTEA DHHKMRRQGE DSNSWMVDGH TDEKSKQLFM ELLHQRPGHQ PLESPSMNRG EPYDRMAASG FGFADHGGRQ
0901: NASSSFGSHA SSDEHVNGLP GDGNYMGSLQ RNNSLLSGSI DGGRKNETKD FSNMLGMSKD VNDIRTWNNA PPKKEGAGLM SFEAQDRMGK QAVMDSLVQG
1001: EVPVATLGRQ SSSSISESYS DNLVGEVRKD RLVVPSHGQV SVLLKRPPSS HSSSPHEGLL EQMSDAANRT AVGNKGSKAS FSEMLKNSSS SSSMKKVAAE
1101: PSSDPNEGNK GGGGKKKGKK GRQLDPALLG FKVTSNRLMG EIHRADDF
0101: QVALIEPLAF ITPDVEEEES LKGIWKGRIT GSEAHTSPGE ESLAEKSLGE TKVDGALLGV MIGDSVSMHN SNSGIVLLYI LTHIQTTVSV GVLGSHNGGL
0201: CGSSESDQVS HGSHEAVRSA FDKSSMLDAG EPIVTGKLQQ PDIEVNHSEG TLPPEEFMFS YIDPQGVIQG PFIGSDIISW FEQGFFGTDL QVRLATAPEG
0301: TPFQDLGSVM SYLKTESMQA HINDQISELE ETSRKANSEI GLSFAPVAES NGSALGHDDV QMNSKSEAYV KPPHVDDRKI VFPGRAGVSG YGSAKSSTSM
0401: HDALMGVSGH SAIPVESAKV ATQNQNENKL HPFGVLWSEL ESSSTPVDLL PNRSYDTGHD QKYLDQAQNL DHLLTLKLQQ QQQQQQQKIQ LQQQQKIQLQ
0501: QRQLEQEYQL QQKLLQEQQQ SHARNLHFQQ ILQGQTPDSR LGQSHDFHRL NNVDQMLLEQ QLMDELQSSG HRSQNFTPYM EQLAAGNFGQ LPHEGHQNEL
0601: LLEQLLSEQM QSQYRQMQLE ELRHIDPQHG QLQSEPIRSL EYQMMQQEQL MQLATRARHN TLLEEHRHID PLWPSNRNDQ LLGAHPGIHR SHSSAGFRPV
0701: DFHQQQQRPP FEDHFSHLER NLSYQQQLNQ ELFEQGLPFE RSTSLPRNTS GLNLDAGRGL NLSELRDAQM QSSGRLGNST PGFSHQNPHI QLGEPHFSEM
0801: EPRKERWHGA DTQLAGGWAE TQFHRPNTEA DHHKMRRQGE DSNSWMVDGH TDEKSKQLFM ELLHQRPGHQ PLESPSMNRG EPYDRMAASG FGFADHGGRQ
0901: NASSSFGSHA SSDEHVNGLP GDGNYMGSLQ RNNSLLSGSI DGGRKNETKD FSNMLGMSKD VNDIRTWNNA PPKKEGAGLM SFEAQDRMGK QAVMDSLVQG
1001: EVPVATLGRQ SSSSISESYS DNLVGEVRKD RLVVPSHGQV SVLLKRPPSS HSSSPHEGLL EQMSDAANRT AVGNKGSKAS FSEMLKNSSS SSSMKKVAAE
1101: PSSDPNEGNK GGGGKKKGKK GRQLDPALLG FKVTSNRLMG EIHRADDF
0001: MAEGKFDLPD DLILSKSSDQ LKELASDNSI PLSPQWLYTK SSESKMDVRS PTPMPMGNPS DPNLKDAWRL DAPEDKKDWK KIVSENETNR RWREEERETG
0101: LLGARKVDRR KTERRIDNVS SRETGEVKTT AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVEINKDKEE PQSESQSVVS NVRATSERDS
0201: DPRDKWRPRH RMESQSGVPT SYRTAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSASAPV FRYPRGKLLD MYRKQKPDPS LGRIPTEMDE
0301: VASITQVALI EPLAFIAPDT EEEASINGIW KGRIISSEVY TSSGEESLGE NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSFGAGY QVSHGSPEAV RSVFTKSPVL DGSESVVGSF EQDYMGKLQQ PDVEVDQSEA AMPPEDFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLANAPEG TPFQDLGRVM SYLKTESAHA HISNQESELE ETRLKANSDT GLSIAPVAES NDSSSMNGTS RSFSVYNNPS AQDNFQRKSE
0601: SEFYATPPHT EDRSFLDFST QDEEIVFPGR AGVSGYASVK SSTSMHDAFM EVSGQSAIPV ESTKAATQKQ HENKLHPFGV LWSELESSNV PVNLLPNRSY
0701: DAMGEPTGAI DNRPIDSRRN TQVDPNMSLD GLASNRMSQF EHLSNRFNLG DQLSSNQHNQ QQFQNRDMLS HSHIGDQAQD LDYLITLQLQ QQQKIQLQQQ
0801: QKIQLQQQQK IQLQQQQKMQ LQQHQLEQEH QLHQKLLQEQ QQSHARQLHY QQILQGQTPD SRFGQSHDFP RSNNVDQMLL EHQLMNELQK SSGHPSQNFA
0901: PYIEQLAAGN FGQLPHEGHQ RELLEQLLST KMQSQYGPMQ SPYGQLQSEP TRSLEYQLLQ QEQLMQLANG VRHNTLLEEQ RHIDPLWPSD HNDQLLRSHP
1001: GIQRSRSSTG FRQLDFHQQQ QRPPFEDQFG QLERNLLYQQ QLRQELFEQG LPFERSASLP VSVSGMNLDP VNGLGLSQGL ELRDATTHMQ IGNSTLGFNH
1101: QNPRIPIGEP HFSQLESMEG RWSGADTQVV GDWAESQLHR SNIDAEHHKM RSESRRMGED SNSWMLGGTT EDRSKQLFME LLHQRPGHQS AESPSMNRGQ
1201: SFDRMAPSGL TPGIQTLGGY SDHGGSHNAP STFGARAFSD EQINRSSGDR NNMGSLHRNN SLLSGIIDGG RSTQNETQAF SNMYAMNKDA NDIKTWNNVP
1301: PKNEGMGRMM SFEAQDRMGK QAVLDSLVHG ELPVVTPGQQ SSLNISDQYS DNLVGEDRRK DRLVVPSHGQ NSVLLKRPPS SHSSSSHEGL IERISDTASR
1401: TAASSYSGIE GGVRRESGAA GNKGSTSEAT SFSEMLKKSN SMKKVAAESN DVTEGSKGGG GKKKGKKGRQ IDPALLGFKV TSNRIMGEIH RADDF
0101: LLGARKVDRR KTERRIDNVS SRETGEVKTT AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVEINKDKEE PQSESQSVVS NVRATSERDS
0201: DPRDKWRPRH RMESQSGVPT SYRTAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSASAPV FRYPRGKLLD MYRKQKPDPS LGRIPTEMDE
0301: VASITQVALI EPLAFIAPDT EEEASINGIW KGRIISSEVY TSSGEESLGE NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSFGAGY QVSHGSPEAV RSVFTKSPVL DGSESVVGSF EQDYMGKLQQ PDVEVDQSEA AMPPEDFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLANAPEG TPFQDLGRVM SYLKTESAHA HISNQESELE ETRLKANSDT GLSIAPVAES NDSSSMNGTS RSFSVYNNPS AQDNFQRKSE
0601: SEFYATPPHT EDRSFLDFST QDEEIVFPGR AGVSGYASVK SSTSMHDAFM EVSGQSAIPV ESTKAATQKQ HENKLHPFGV LWSELESSNV PVNLLPNRSY
0701: DAMGEPTGAI DNRPIDSRRN TQVDPNMSLD GLASNRMSQF EHLSNRFNLG DQLSSNQHNQ QQFQNRDMLS HSHIGDQAQD LDYLITLQLQ QQQKIQLQQQ
0801: QKIQLQQQQK IQLQQQQKMQ LQQHQLEQEH QLHQKLLQEQ QQSHARQLHY QQILQGQTPD SRFGQSHDFP RSNNVDQMLL EHQLMNELQK SSGHPSQNFA
0901: PYIEQLAAGN FGQLPHEGHQ RELLEQLLST KMQSQYGPMQ SPYGQLQSEP TRSLEYQLLQ QEQLMQLANG VRHNTLLEEQ RHIDPLWPSD HNDQLLRSHP
1001: GIQRSRSSTG FRQLDFHQQQ QRPPFEDQFG QLERNLLYQQ QLRQELFEQG LPFERSASLP VSVSGMNLDP VNGLGLSQGL ELRDATTHMQ IGNSTLGFNH
1101: QNPRIPIGEP HFSQLESMEG RWSGADTQVV GDWAESQLHR SNIDAEHHKM RSESRRMGED SNSWMLGGTT EDRSKQLFME LLHQRPGHQS AESPSMNRGQ
1201: SFDRMAPSGL TPGIQTLGGY SDHGGSHNAP STFGARAFSD EQINRSSGDR NNMGSLHRNN SLLSGIIDGG RSTQNETQAF SNMYAMNKDA NDIKTWNNVP
1301: PKNEGMGRMM SFEAQDRMGK QAVLDSLVHG ELPVVTPGQQ SSLNISDQYS DNLVGEDRRK DRLVVPSHGQ NSVLLKRPPS SHSSSSHEGL IERISDTASR
1401: TAASSYSGIE GGVRRESGAA GNKGSTSEAT SFSEMLKKSN SMKKVAAESN DVTEGSKGGG GKKKGKKGRQ IDPALLGFKV TSNRIMGEIH RADDF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I983]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.