Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P02660_001 | Banana | cytosol | 52.6 | 54.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.2 | 49.97 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 32.63 | 34.17 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 32.45 | 34.11 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 31.34 | 33.67 |
| Zm00001d011983_P003 | Maize | cytosol | 31.71 | 33.4 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 31.83 | 33.23 |
| KXG34019 | Sorghum | cytosol | 30.84 | 32.53 |
| Zm00001d011981_P007 | Maize | cytosol | 30.84 | 32.26 |
| PGSC0003DMT400028024 | Potato | nucleus | 29.79 | 31.22 |
| Solyc05g015930.2.1 | Tomato | cytosol | 29.6 | 31.02 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 31.89 | 30.99 |
| Solyc05g015920.2.1 | Tomato | nucleus | 29.05 | 30.11 |
| CDY66146 | Canola | cytosol | 13.04 | 29.1 |
| KRG94582 | Soybean | cytosol | 28.62 | 28.65 |
| KRH06906 | Soybean | cytosol | 28.49 | 28.53 |
| PGSC0003DMT400006082 | Potato | cytosol | 12.55 | 27.81 |
| AT1G27430.1 | Thale cress | cytosol | 25.59 | 27.75 |
| Os01t0924600-01 | Rice | plasma membrane | 7.73 | 27.41 |
| CDY66147 | Canola | nucleus | 2.84 | 27.22 |
| AT1G24300.1 | Thale cress | cytosol | 24.85 | 26.89 |
| CDY11817 | Canola | cytosol | 17.43 | 24.69 |
| CDY11819 | Canola | cytosol | 17.0 | 23.95 |
| Bra010950.1-P | Field mustard | cytosol | 17.74 | 22.67 |
| Bra010951.1-P | Field mustard | cytosol | 14.77 | 22.57 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 16.25 | 16.6 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 16.5 | 15.72 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P15970_001 | EnsemblPlants:GSMUA_Achr4T15970_001 | EnsemblPlantsGene:GSMUA_Achr4G15970_001 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil |
| PANTHER:PTHR14445 | PANTHER:PTHR14445:SF41 | PFAM:PF02213 | PFscan:PS50829 | SEG:seg | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI000294DEE0 | UniProt:M0SPB1 | MapMan:35.2 | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G15970_001]
Coordinates
chr4:-:14037838..14052162
Molecular Weight (calculated)
181327.0 Da
IEP (calculated)
5.944
GRAVY (calculated)
-0.770
Length
1618 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGGNVDLPE DLLPSKLADE AWAGKDQVTS ENNIPLSPQW LYAKPSDNKD ARSPSLAPSV TLPDSFQNDM RCFDGSLDKK EWRRNANDLE SNRRWRDEER
0101: ETGLLGRREW KKEGDRETEY RKNDRHPDNI SMREAPDLRT LSSSDWLHEV SNRSAGNESR RDSKWSSRWG PEDKDKEPRK EKKADVDKDG SHAEKQSFIA
0201: NLRPWSGSDS HDRWRPRHRQ EIHSSGSSVL RAAPGFGLER DRVEGPPVPF TSGRGRSNSV TVLQFGKSSA SGPIGAVPIN KEQFRYPRGK LLDIYRNQKM
0301: SVVDAIPDGF EEVPLVTGSS SLTPLAFVAP DVDEEVLLKD IWKAKVTSRE LSLSQEKAVI INETEIDGGK TIVEKKHDEK GSITTSRDLD TDCKSENNPD
0401: IRINLVGPAG LAPVVVDHDV VYDKPVSDGN IINSEINVGE IELVNVDGRS CLLDILKNIK LEGEDSTVSL DVSAMLPDES YPLFDASFEI PNTNKHEISK
0501: IEKKHLEQGT SLEELSLLYQ DPRGDIQGPF LVVDIISWFE QGFFGTDLPV CLSDAPEGTP FQPLGEIMPY LKLETHTISD APSAENFEAV DTTRGNLDAC
0601: VASSHSNGSF ITNGQQRVLS WDALGRHMKP NVVESEASVN PNKERLSFSN SEAPLGTACV DGKIFQDFAG QDAEVVSFSG RPMSDMEVSG KLVNDHIALS
0701: SSTTGHHFMV ADTGNTSFSS HKISRDNDLN PLGLLWSELE ATHVKHPLSS TIPLSSEKLI DNHDAARNAF LFSHNQEQFN LTSDYPVAKE SWANNCRMSK
0801: GLNIIHDTIY ANNLSRFEAQ PNQLNLEQQL LFQQLQKQQH EEQCLLAHQD VEFAGKFFNQ MHRSVHQHHL VNQRSMEDLE HLLKYQFEQQ RFLDQLQQQH
0901: QLHQRQQQLQ EHQMQLLQHH LQFHEPQQPQ KQIHREDLLH QHLLEPGSGA SNIDSHEMNM FEQVLLRQHL LNETHQQSHN LLLHHDATIE QLLQANVSRS
1001: LQRQNHNDLL DVLSHSKQRQ VPPLEQQFLL RLQREQLQGQ KYSTASRKLP GMEEERHVGG VWSVDEYGQF IRTAASPHQS HSARLSHLDI LRTPQSLSSP
1101: EQPSHLHRNF PSHERMQQGP YERGPHPIDR SMHMHAVTPN SNLKLLNAIA RAQGPDGQGH LDHFHTPGQI GQFPSSAHPC QSDIFEFTGT HSDAAEKLWS
1201: EPSRHQPADL MQSHLKQLQI EAENQRRGIN MIEDPNTWAS YVENDGNSEY GFRDLIHREI PQSQHTKGLV VATATPSYEQ RDSSWIYSQP VFEHAFKLGP
1301: DRAGLSSSFS EGSLFAQVGQ PPNEQLVNNN LEDGVNNFES SRSTLRSNST TSLEQKHFQS DMDLIERDKF VNYVGGASLQ RLGFSNLVEG ERGKMQGLKG
1401: TSGTQSAMET QESGVMQFEG GGHEEQHIDK PSRHDSSGKA GGGLVFYNYE TGLDSANLEE TNNMISGDLP KGTDKLFSKH AYDLPATSPA TVSDLISSRP
1501: PERRNPITSG SSKGNAIPKS AGNPASQSIE TSISNKKDLR FCQTSSGNNA DVIEPSFSEM LKSTKKLMPE LVETLEAGSI GKSAKKRGKK GRQIDPSLLG
1601: FKVHSNRILM GEIQRPDD
0101: ETGLLGRREW KKEGDRETEY RKNDRHPDNI SMREAPDLRT LSSSDWLHEV SNRSAGNESR RDSKWSSRWG PEDKDKEPRK EKKADVDKDG SHAEKQSFIA
0201: NLRPWSGSDS HDRWRPRHRQ EIHSSGSSVL RAAPGFGLER DRVEGPPVPF TSGRGRSNSV TVLQFGKSSA SGPIGAVPIN KEQFRYPRGK LLDIYRNQKM
0301: SVVDAIPDGF EEVPLVTGSS SLTPLAFVAP DVDEEVLLKD IWKAKVTSRE LSLSQEKAVI INETEIDGGK TIVEKKHDEK GSITTSRDLD TDCKSENNPD
0401: IRINLVGPAG LAPVVVDHDV VYDKPVSDGN IINSEINVGE IELVNVDGRS CLLDILKNIK LEGEDSTVSL DVSAMLPDES YPLFDASFEI PNTNKHEISK
0501: IEKKHLEQGT SLEELSLLYQ DPRGDIQGPF LVVDIISWFE QGFFGTDLPV CLSDAPEGTP FQPLGEIMPY LKLETHTISD APSAENFEAV DTTRGNLDAC
0601: VASSHSNGSF ITNGQQRVLS WDALGRHMKP NVVESEASVN PNKERLSFSN SEAPLGTACV DGKIFQDFAG QDAEVVSFSG RPMSDMEVSG KLVNDHIALS
0701: SSTTGHHFMV ADTGNTSFSS HKISRDNDLN PLGLLWSELE ATHVKHPLSS TIPLSSEKLI DNHDAARNAF LFSHNQEQFN LTSDYPVAKE SWANNCRMSK
0801: GLNIIHDTIY ANNLSRFEAQ PNQLNLEQQL LFQQLQKQQH EEQCLLAHQD VEFAGKFFNQ MHRSVHQHHL VNQRSMEDLE HLLKYQFEQQ RFLDQLQQQH
0901: QLHQRQQQLQ EHQMQLLQHH LQFHEPQQPQ KQIHREDLLH QHLLEPGSGA SNIDSHEMNM FEQVLLRQHL LNETHQQSHN LLLHHDATIE QLLQANVSRS
1001: LQRQNHNDLL DVLSHSKQRQ VPPLEQQFLL RLQREQLQGQ KYSTASRKLP GMEEERHVGG VWSVDEYGQF IRTAASPHQS HSARLSHLDI LRTPQSLSSP
1101: EQPSHLHRNF PSHERMQQGP YERGPHPIDR SMHMHAVTPN SNLKLLNAIA RAQGPDGQGH LDHFHTPGQI GQFPSSAHPC QSDIFEFTGT HSDAAEKLWS
1201: EPSRHQPADL MQSHLKQLQI EAENQRRGIN MIEDPNTWAS YVENDGNSEY GFRDLIHREI PQSQHTKGLV VATATPSYEQ RDSSWIYSQP VFEHAFKLGP
1301: DRAGLSSSFS EGSLFAQVGQ PPNEQLVNNN LEDGVNNFES SRSTLRSNST TSLEQKHFQS DMDLIERDKF VNYVGGASLQ RLGFSNLVEG ERGKMQGLKG
1401: TSGTQSAMET QESGVMQFEG GGHEEQHIDK PSRHDSSGKA GGGLVFYNYE TGLDSANLEE TNNMISGDLP KGTDKLFSKH AYDLPATSPA TVSDLISSRP
1501: PERRNPITSG SSKGNAIPKS AGNPASQSIE TSISNKKDLR FCQTSSGNNA DVIEPSFSEM LKSTKKLMPE LVETLEAGSI GKSAKKRGKK GRQIDPSLLG
1601: FKVHSNRILM GEIQRPDD
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.