CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010951.1-P	Field mustard	cytosol	76.55	52.41
CDY11819	Canola	cytosol	66.9	42.25
CDY11817	Canola	cytosol	65.66	41.68
AT1G24300.1	Thale cress	cytosol	56.14	27.22
AT1G27430.1	Thale cress	cytosol	54.76	26.61
VIT_01s0146g00140.t01	Wine grape	nucleus	30.48	23.36
PGSC0003DMT400006082	Potato	cytosol	16.41	16.3
PGSC0003DMT400028024	Potato	nucleus	32.28	15.16
Solyc05g015920.2.1	Tomato	nucleus	32.55	15.12
Solyc05g015930.2.1	Tomato	cytosol	31.86	14.96
VIT_14s0068g01650.t01	Wine grape	nucleus	32.69	14.23
TraesCS3D01G428900.1	Wheat	cytosol	29.24	14.08
KRH06906	Soybean	cytosol	31.17	13.99
KRG94582	Soybean	cytosol	31.17	13.99
TraesCS3A01G436500.1	Wheat	endoplasmic reticulum, plasma membrane	29.24	13.78
TraesCS3B01G470800.2	Wheat	cytosol	29.24	13.72
KXG34019	Sorghum	cytosol	28.55	13.49
HORVU3Hr1G095420.3	Barley	cytosol, nucleus	28.83	13.48
GSMUA_Achr7P02660_001	Banana	cytosol	28.83	13.38
Zm00001d011983_P003	Maize	cytosol	27.72	13.09
GSMUA_Achr4P15970_001	Banana	cytosol	29.1	13.04
GSMUA_AchrUn_...	Banana	cytosol	28.0	12.74
Zm00001d011981_P007	Maize	cytosol	27.03	12.67
CDY32971	Canola	nucleus	21.24	7.5
CDY71257	Canola	cytosol, nucleus	4.0	5.42
CDY66147	Canola	nucleus	0.69	2.96
Os01t0924600-01	Rice	plasma membrane	0.69	1.1

Protein Annotations

EnsemblPlants:CDY66146	EnsemblPlantsGene:GSBRNA2T00052168001	Gene3D:3.30.1490.40	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GYF	InterPro:GYF-like_dom_sf	InterPro:IPR003169	InterPro:IPR035445	ncoils:Coil	PANTHER:PTHR14445
PANTHER:PTHR14445:SF41	PFAM:PF02213	PFscan:PS50829	ProteinID:CDY66146	ProteinID:CDY66146.1	SEG:seg
SMART:SM00444	SUPFAM:SSF55277	UniParc:UPI0004EE0920	UniProt:A0A078JJZ7	MapMan:35.2	:

Description

BnaAnng21680DBnaAnng21680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJZ7]

Coordinates

chrLK035108:+:1890..5729

Molecular Weight (calculated)

81055.4 Da

IEP (calculated)

5.148

GRAVY (calculated)

-0.771

Length

725 amino acids

Sequence
(BLAST)

001: MFESREDVRS PAPVPVGSRR RDNKWSSRWG PDDKEKEKET KVDYNNKDNK EEAQSETQSV IGSLRESETR DKWRPRHRME QVQSGGPASY RAAPGFGLDK
101: GRSEGRSEGP NIGFTVGRGR ARGTWSAFFG AGGFLRNESV PGKPAPTCRY VRGKLLDLYR NQKPDRMPID MEEVDSVTQV ALIEPLAFIA PGVEEEESLK
201: GIWKGRITSS EAHTSPGEES LAEESMGETK VDGALLGVMS GDSVSMHNSN SGIVLLYILT HIQTTVAVGV LGSHNGGLWG ASESDQVSRG SPEAVRSAFD
301: KSSVLDADEP IVTGKLQQPD IEVNHSEGTL PPEEFMFSYI DPQGVIQGPF IGSDIISWFE QGFFGTDLQV RLATAPEGTP FQDLGSVMSY LKTESMQAHI
401: NDQIIELEQT SRKANSEIGL SFAPVQESNG SALGHDNVQI QSKSEAYVKP PHVDDRSFLD FSAQDEEIVF PGRARVSGYG SAKSSTSMHD ALMGVSGHPA
501: IPVESAKVAT QNQNENKLHP FGVLWSELES SSTPVDLLPN RSYDDQKYLD QAQDLDHLTL QLQQQQQQKI QLQHQQQQKI QLQQQQKIQL QQRQLEQEYQ
601: LQQKLLQEQQ QSHARNLHFQ QILQGQTPDS RLGQSHDFHR LNNVDQMLLE QQLMDELQSS GHRSQNFTPY MEQLAAGNFG QLHHEGHQKE LLEQLLSEQM
701: QSQYRQMHSQ HGHMQSEPIR SLDTK

Best Arabidopsis Sequence Match ( AT1G24300.1 )
(BLAST)

0001: MAEGKFDLPD DLILSKSSDQ LKELASDNSI PLSPQWLYTK SSESKMDVRS PTPMPMGNPS DPNLKDAWRL DAPEDKKDWK KIVSENETNR RWREEERETG
0101: LLGARKVDRR KTERRIDNVS SRETGEVKTT AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVEINKDKEE PQSESQSVVS NVRATSERDS
0201: DPRDKWRPRH RMESQSGVPT SYRTAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSASAPV FRYPRGKLLD MYRKQKPDPS LGRIPTEMDE
0301: VASITQVALI EPLAFIAPDT EEEASINGIW KGRIISSEVY TSSGEESLGE NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSFGAGY QVSHGSPEAV RSVFTKSPVL DGSESVVGSF EQDYMGKLQQ PDVEVDQSEA AMPPEDFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLANAPEG TPFQDLGRVM SYLKTESAHA HISNQESELE ETRLKANSDT GLSIAPVAES NDSSSMNGTS RSFSVYNNPS AQDNFQRKSE
0601: SEFYATPPHT EDRSFLDFST QDEEIVFPGR AGVSGYASVK SSTSMHDAFM EVSGQSAIPV ESTKAATQKQ HENKLHPFGV LWSELESSNV PVNLLPNRSY
0701: DAMGEPTGAI DNRPIDSRRN TQVDPNMSLD GLASNRMSQF EHLSNRFNLG DQLSSNQHNQ QQFQNRDMLS HSHIGDQAQD LDYLITLQLQ QQQKIQLQQQ
0801: QKIQLQQQQK IQLQQQQKMQ LQQHQLEQEH QLHQKLLQEQ QQSHARQLHY QQILQGQTPD SRFGQSHDFP RSNNVDQMLL EHQLMNELQK SSGHPSQNFA
0901: PYIEQLAAGN FGQLPHEGHQ RELLEQLLST KMQSQYGPMQ SPYGQLQSEP TRSLEYQLLQ QEQLMQLANG VRHNTLLEEQ RHIDPLWPSD HNDQLLRSHP
1001: GIQRSRSSTG FRQLDFHQQQ QRPPFEDQFG QLERNLLYQQ QLRQELFEQG LPFERSASLP VSVSGMNLDP VNGLGLSQGL ELRDATTHMQ IGNSTLGFNH
1101: QNPRIPIGEP HFSQLESMEG RWSGADTQVV GDWAESQLHR SNIDAEHHKM RSESRRMGED SNSWMLGGTT EDRSKQLFME LLHQRPGHQS AESPSMNRGQ
1201: SFDRMAPSGL TPGIQTLGGY SDHGGSHNAP STFGARAFSD EQINRSSGDR NNMGSLHRNN SLLSGIIDGG RSTQNETQAF SNMYAMNKDA NDIKTWNNVP
1301: PKNEGMGRMM SFEAQDRMGK QAVLDSLVHG ELPVVTPGQQ SSLNISDQYS DNLVGEDRRK DRLVVPSHGQ NSVLLKRPPS SHSSSSHEGL IERISDTASR
1401: TAASSYSGIE GGVRRESGAA GNKGSTSEAT SFSEMLKKSN SMKKVAAESN DVTEGSKGGG GKKKGKKGRQ IDPALLGFKV TSNRIMGEIH RADDF

Arabidopsis Description

GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I983]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.