Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028024 | Potato | nucleus | 91.84 | 91.84 |
| Solyc05g015920.2.1 | Tomato | nucleus | 85.56 | 84.63 |
| VIT_01s0146g00140.t01 | Wine grape | nucleus | 23.25 | 37.95 |
| CDY66147 | Canola | nucleus | 4.02 | 36.69 |
| AT1G27430.1 | Thale cress | cytosol | 34.26 | 35.46 |
| AT1G24300.1 | Thale cress | cytosol | 34.33 | 35.45 |
| KRH06906 | Soybean | cytosol | 34.59 | 33.04 |
| KRG94582 | Soybean | cytosol | 33.74 | 32.24 |
| CDY66146 | Canola | cytosol | 14.96 | 31.86 |
| CDY11817 | Canola | cytosol | 23.32 | 31.52 |
| CDY11819 | Canola | cytosol | 23.12 | 31.1 |
| Bra010950.1-P | Field mustard | cytosol | 25.0 | 30.49 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 30.63 | 30.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.7 | 29.76 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 31.02 | 29.6 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 28.82 | 29.55 |
| KXG34019 | Sorghum | cytosol | 29.34 | 29.53 |
| Zm00001d011983_P003 | Maize | cytosol | 29.15 | 29.3 |
| Zm00001d011981_P007 | Maize | cytosol | 29.15 | 29.09 |
| Bra010951.1-P | Field mustard | cytosol | 19.95 | 29.08 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 29.02 | 29.0 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 28.56 | 28.66 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 28.69 | 28.58 |
| Os01t0924600-01 | Rice | plasma membrane | 8.03 | 27.19 |
| Solyc04g080240.2.1 | Tomato | cytosol | 17.42 | 15.55 |
Protein Annotations
| EnsemblPlants:Solyc05g015930.2.1 | EnsemblPlantsGene:Solyc05g015930.2 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF41 | PFAM:PF02213 | PFscan:PS50829 | SEG:seg | SMART:SM00444 | SUPFAM:SSF55277 |
| UniParc:UPI0002766C78 | UniProt:K4BYV9 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:+:13046102..13054405
Molecular Weight (calculated)
171415.0 Da
IEP (calculated)
5.583
GRAVY (calculated)
-0.808
Length
1544 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEGNLDLPD DLLSSKTSDH SKGNDDNKPF MGQLDISKDQ PMVDSSIPLS PQWLYVKPSD TKMEPRPPSS LSLGSSVDSS QKDAWRTDVP EDKKDWRRTT
0101: METESSRRWR EEERETGLLG RRERRKTDRR AEHDVNNRNS GVDTRRDNKW SSRWGPDDKE KENRTEKRID VDKEDVHNDG QTFVANHTVS ERESDSRDKW
0201: RPRYKMEGNS AAPSSYRAAP GFGQERGKVE GSNVGFNLGR GRSTGTIIRT SSGGAIGASP FENSVPGKSG ISTGIFSYPR GKALDIYRRQ KLGSSLCSMP
0301: ENMEEAPPVT QVIAIEPLAF VVPDAEEEAV LNDIWKGKIT GGGVSNNSFR KGQSMDNVTE TGDTEPNNTK IGAPSADVTE ETVDGLLKTS IRVEAYSFVY
0401: ENGVRVKFDG GDNHEGQKDN HSEAIAADGS LLTRERADNS DCFKYISGSQ FDISMQSLPD SGATKTPIFE NNQHVAFDGS LKVSDDSNSA FVKSSSEIYW
0501: NNLLGRGIPP EELSLYYRDP QGEIQGPFLG ADIISWFDQG FFGMDLLVRL EDAPEDSPFF ELCDVMPHLK FEHEHVGNTN LSQAEPSAVL EGKLDPDLRS
0601: SASVPEMVGY SAFDGSSWPP SDFDGIGGHR VQSIPDHPAR QFKPAYLHSE DFNNFVVQDE EIVFPGRPGS GGNAIGKTST GLTDPSKIHR ATPSAICEGG
0701: VPDHEGTLHP LGLLWSELEG TEGKNGPIFD VPFRGSGQDQ VLNSGAARVG PFGAKTDSTS ALETWTDAYR RNAGSELNIY HDAMDASRLL HQDHELNRFE
0801: LADKMFPQQL QQQRPHNLIS SHNSHLNEAM MERGKNHNSI HQPQLASQTG QDLEHFMALQ LQQQRQLLQL QQLQQQQQFH QQQMLMKEQE SHARQLVLEQ
0901: LLQRQVHDPS HTQSRLDAIR HSSALEQVLI EQQILSELQQ RPHLPPRHAE PSIEHLIQAK FGQIPHQGPQ NDLMELLSRA KHGQLHPLEH QALQQEQAHE
1001: RLRQRLEMEE DRQIGAVWPA DETGQYLRNS GVARRANSGF GSLDIYQQQQ MPPAEEHVSH LQRNLSMQDR IQRGLYDTGF LPLERTMSVP GGGPGVNLDA
1101: INPLVRAQGL EMQDPNSRMH SAGHMPGFSS GIHLQSPHRP LFSSQFHAPN VDTIENHWSE RNGQLPADWM ETRLQQLHLN GERHRRDFDV KRASEDQSMW
1201: MSAGANDDSS KRLLMELLQQ KSGQQSTEQA EITRGILFER GFQSGHFSTT NASNRSFNPL LDQDTSLNQA FSVGSYGSNS GFPPQRDHVN EIAGSLDACE
1301: RLPFQSHSGA FAEPEPVFSS INDASQVHLE ARESIVRQAG VATVEGEMPI NLLSRHTSLG TGGGSLDSYN DKNDRRDSAA EEIPKERVVV TSKRSDNILP
1401: KYPPVLRVSS TQEGLSEIAS DGLVRGKNSS DAMASEGGRR EVGGNAANQV PSAMTSEKKD GRFRRTASCS DADVSETSFS DMLKSNVKKA TAQEAHASEA
1501: LDATQYARSG KKKGKKGRQI DPALLGFKVT SNRIMMGEIQ RIED
0101: METESSRRWR EEERETGLLG RRERRKTDRR AEHDVNNRNS GVDTRRDNKW SSRWGPDDKE KENRTEKRID VDKEDVHNDG QTFVANHTVS ERESDSRDKW
0201: RPRYKMEGNS AAPSSYRAAP GFGQERGKVE GSNVGFNLGR GRSTGTIIRT SSGGAIGASP FENSVPGKSG ISTGIFSYPR GKALDIYRRQ KLGSSLCSMP
0301: ENMEEAPPVT QVIAIEPLAF VVPDAEEEAV LNDIWKGKIT GGGVSNNSFR KGQSMDNVTE TGDTEPNNTK IGAPSADVTE ETVDGLLKTS IRVEAYSFVY
0401: ENGVRVKFDG GDNHEGQKDN HSEAIAADGS LLTRERADNS DCFKYISGSQ FDISMQSLPD SGATKTPIFE NNQHVAFDGS LKVSDDSNSA FVKSSSEIYW
0501: NNLLGRGIPP EELSLYYRDP QGEIQGPFLG ADIISWFDQG FFGMDLLVRL EDAPEDSPFF ELCDVMPHLK FEHEHVGNTN LSQAEPSAVL EGKLDPDLRS
0601: SASVPEMVGY SAFDGSSWPP SDFDGIGGHR VQSIPDHPAR QFKPAYLHSE DFNNFVVQDE EIVFPGRPGS GGNAIGKTST GLTDPSKIHR ATPSAICEGG
0701: VPDHEGTLHP LGLLWSELEG TEGKNGPIFD VPFRGSGQDQ VLNSGAARVG PFGAKTDSTS ALETWTDAYR RNAGSELNIY HDAMDASRLL HQDHELNRFE
0801: LADKMFPQQL QQQRPHNLIS SHNSHLNEAM MERGKNHNSI HQPQLASQTG QDLEHFMALQ LQQQRQLLQL QQLQQQQQFH QQQMLMKEQE SHARQLVLEQ
0901: LLQRQVHDPS HTQSRLDAIR HSSALEQVLI EQQILSELQQ RPHLPPRHAE PSIEHLIQAK FGQIPHQGPQ NDLMELLSRA KHGQLHPLEH QALQQEQAHE
1001: RLRQRLEMEE DRQIGAVWPA DETGQYLRNS GVARRANSGF GSLDIYQQQQ MPPAEEHVSH LQRNLSMQDR IQRGLYDTGF LPLERTMSVP GGGPGVNLDA
1101: INPLVRAQGL EMQDPNSRMH SAGHMPGFSS GIHLQSPHRP LFSSQFHAPN VDTIENHWSE RNGQLPADWM ETRLQQLHLN GERHRRDFDV KRASEDQSMW
1201: MSAGANDDSS KRLLMELLQQ KSGQQSTEQA EITRGILFER GFQSGHFSTT NASNRSFNPL LDQDTSLNQA FSVGSYGSNS GFPPQRDHVN EIAGSLDACE
1301: RLPFQSHSGA FAEPEPVFSS INDASQVHLE ARESIVRQAG VATVEGEMPI NLLSRHTSLG TGGGSLDSYN DKNDRRDSAA EEIPKERVVV TSKRSDNILP
1401: KYPPVLRVSS TQEGLSEIAS DGLVRGKNSS DAMASEGGRR EVGGNAANQV PSAMTSEKKD GRFRRTASCS DADVSETSFS DMLKSNVKKA TAQEAHASEA
1501: LDATQYARSG KKKGKKGRQI DPALLGFKVT SNRIMMGEIQ RIED
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.