Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G470800.2 | Wheat | cytosol | 96.17 | 95.79 |
TraesCS3D01G428900.1 | Wheat | cytosol | 92.2 | 94.22 |
HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 93.11 | 92.45 |
Os01t0924600-01 | Rice | plasma membrane | 21.57 | 72.81 |
KXG34019 | Sorghum | cytosol | 63.42 | 63.62 |
Zm00001d011983_P003 | Maize | cytosol | 62.05 | 62.17 |
Zm00001d011981_P007 | Maize | cytosol | 59.0 | 58.69 |
GSMUA_AchrUn_... | Banana | cytosol | 34.76 | 33.58 |
GSMUA_Achr7P02660_001 | Banana | cytosol | 33.98 | 33.48 |
CDY66147 | Canola | nucleus | 3.64 | 33.14 |
GSMUA_Achr4P15970_001 | Banana | cytosol | 34.11 | 32.45 |
CDY66146 | Canola | cytosol | 13.78 | 29.24 |
Solyc05g015920.2.1 | Tomato | nucleus | 29.5 | 29.08 |
PGSC0003DMT400028024 | Potato | nucleus | 29.11 | 29.02 |
Solyc05g015930.2.1 | Tomato | cytosol | 28.66 | 28.56 |
VIT_14s0068g01650.t01 | Wine grape | nucleus | 30.6 | 28.29 |
KRG94582 | Soybean | cytosol | 29.69 | 28.28 |
KRH06906 | Soybean | cytosol | 29.43 | 28.03 |
AT1G27430.1 | Thale cress | cytosol | 26.77 | 27.61 |
AT1G24300.1 | Thale cress | cytosol | 26.58 | 27.36 |
CDY11817 | Canola | cytosol | 18.84 | 25.39 |
CDY11819 | Canola | cytosol | 18.91 | 25.35 |
PGSC0003DMT400006082 | Potato | cytosol | 12.02 | 25.34 |
Bra010950.1-P | Field mustard | cytosol | 20.21 | 24.57 |
Bra010951.1-P | Field mustard | cytosol | 16.18 | 23.51 |
TraesCS2A01G255000.2 | Wheat | nucleus | 15.53 | 14.05 |
Protein Annotations
EnsemblPlants:TraesCS3A01G436500.1 | EnsemblPlantsGene:TraesCS3A01G436500 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil | PANTHER:PTHR14445 |
PANTHER:PTHR14445:SF41 | PFAM:PF02213 | PFscan:PS50829 | SEG:seg | SMART:SM00444 | SUPFAM:SSF55277 |
TIGR:cd00072 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:680353058..680358913
Molecular Weight (calculated)
170404.0 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.888
Length
1539 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGNGMVADSV FACVHVWTCV FVRATVCLLV CLLGGSLNQQ HLENSIPLSP QWLYAKPSDA KISAPHGSLL EPSEKDVRML EGSGAKKERR RNAFDAGWLD
0101: EERETSLLGR RDHKKEVDRE VENRKNDRRS DNVSARDNND SRAAPTSGRW DDGSTRNSGN EGRRDGKWSL RWGPDDKEKD SKPEKKMDAE KDEPHGEKQT
0201: LPVRLLPESD SRDKWRPRHR QETQTSGTAT YRAAPGFGLE KGRVKESNVG FAPGRGRANP NSVPSFSRPS SAGPIGAPPV YGRRAATAGA FRYPRGKLLD
0301: IYRQQKVVQS FEDGRRMLEE VPPITLSTSV KPLAFVTPDN NEEVVLEDIR KGRVTSSEAT NTTALQKERN KDLEAFGIDA NKDKSAEAFS GLSHEGSAAL
0401: ISEKDAFYNE GMFAGGITGP PKKPTEENAP SHPHGLSGIR EETKFNEVKP SADIDPSTKL PDDSNAQLNV NVDYPTGQAS YTETKAGGQD SYPEELTLYY
0501: LDPQGGVQGP FMGTDIVSWY EDGYFGLELP VRLAQAPDDA PFRPLSDLMP YLGHKPQSLP PVSHGGSAES PDSVHNNFED ALPTSGSFGK SDQTSKADSG
0601: NYAANPTRGD QEALVQSRTG WFPSVEAQKT EANPDIRQQR IPETVSQDAE EVLYTGRPTS GMGQSRPDFD NDRADFQLTS LDSRSGVGEA NLPKQDAPRE
0701: NELSPLGLLW SELEGMHPKQ PLSSNVLGVN ERRNPKPTAP KDIPPANIRH GPLSRMNEAP VVRDEWPVNL GRLDSINDAN MSGLISQVEP ELGHLNYEEQ
0801: MLLTQIRREQ LQQEQMMGRN NLEFPGQFAG QVFDSLHQHR QSINPPAPEV EHLLRVQFEL EHQQRRQQLQ QEQHRQQLQQ EQHQRQLQQE QHQRQLQQRQ
0901: AQLLQQQQQQ QQQLILEQML QQQLQSSNFG QANMVDQVLL REQLLNDLHH QPHHFQRQHD AAIEQLIQAK FGHGHHREQH NDMLDVLSRS NQRQALPLEQ
1001: QILLGLHHDQ LQTQQLANAI RQHAGREEER HLSGGWPMDD PSQFIRTGTS PNQSHASRLG QFDLLQSLQR SSSVEHHDHL DRSLSMHERL HRGGQGIHSL
1101: ERSGSLPGGA PLPNPDVVNA LARHHGLGQM ETHGDLYSAG QMPMHASGVH PQQHRLQEQL SGSHMGRLER NWSDANGQLQ NSLMEASRIN QLQIEAEKQR
1201: RNVEMNLPID NPHAWASLMN NERNPEAELS DMIHQKLVLQ AQQSRGFPDV PAPVSFGRKD PSSLFAQPAA DNPLRSSVDR LSFDDPLAER SHFSKMGHLG
1301: QDGPTTLDIL PNNIEMNRKL GLRSSSATML DMQRGEFPDV MGGSASTNQL VGNANDVARR KRQGSSANLA VEDTDFSEAV SNWVDTGIPK GSSHSLLKRT
1401: ANPHAATSQA ASTDLSSAIR SKKAGHASSA SSDEHKMESG VTSAAHAVEA TASANKEAGS FGIPPSSNQD ASGPSFSEML KSTKKPPLQY DASESADGGP
1501: GGKGTKKKAK KGKQIDPSLL GFKVHSNRIL MGEIHRPDD
0101: EERETSLLGR RDHKKEVDRE VENRKNDRRS DNVSARDNND SRAAPTSGRW DDGSTRNSGN EGRRDGKWSL RWGPDDKEKD SKPEKKMDAE KDEPHGEKQT
0201: LPVRLLPESD SRDKWRPRHR QETQTSGTAT YRAAPGFGLE KGRVKESNVG FAPGRGRANP NSVPSFSRPS SAGPIGAPPV YGRRAATAGA FRYPRGKLLD
0301: IYRQQKVVQS FEDGRRMLEE VPPITLSTSV KPLAFVTPDN NEEVVLEDIR KGRVTSSEAT NTTALQKERN KDLEAFGIDA NKDKSAEAFS GLSHEGSAAL
0401: ISEKDAFYNE GMFAGGITGP PKKPTEENAP SHPHGLSGIR EETKFNEVKP SADIDPSTKL PDDSNAQLNV NVDYPTGQAS YTETKAGGQD SYPEELTLYY
0501: LDPQGGVQGP FMGTDIVSWY EDGYFGLELP VRLAQAPDDA PFRPLSDLMP YLGHKPQSLP PVSHGGSAES PDSVHNNFED ALPTSGSFGK SDQTSKADSG
0601: NYAANPTRGD QEALVQSRTG WFPSVEAQKT EANPDIRQQR IPETVSQDAE EVLYTGRPTS GMGQSRPDFD NDRADFQLTS LDSRSGVGEA NLPKQDAPRE
0701: NELSPLGLLW SELEGMHPKQ PLSSNVLGVN ERRNPKPTAP KDIPPANIRH GPLSRMNEAP VVRDEWPVNL GRLDSINDAN MSGLISQVEP ELGHLNYEEQ
0801: MLLTQIRREQ LQQEQMMGRN NLEFPGQFAG QVFDSLHQHR QSINPPAPEV EHLLRVQFEL EHQQRRQQLQ QEQHRQQLQQ EQHQRQLQQE QHQRQLQQRQ
0901: AQLLQQQQQQ QQQLILEQML QQQLQSSNFG QANMVDQVLL REQLLNDLHH QPHHFQRQHD AAIEQLIQAK FGHGHHREQH NDMLDVLSRS NQRQALPLEQ
1001: QILLGLHHDQ LQTQQLANAI RQHAGREEER HLSGGWPMDD PSQFIRTGTS PNQSHASRLG QFDLLQSLQR SSSVEHHDHL DRSLSMHERL HRGGQGIHSL
1101: ERSGSLPGGA PLPNPDVVNA LARHHGLGQM ETHGDLYSAG QMPMHASGVH PQQHRLQEQL SGSHMGRLER NWSDANGQLQ NSLMEASRIN QLQIEAEKQR
1201: RNVEMNLPID NPHAWASLMN NERNPEAELS DMIHQKLVLQ AQQSRGFPDV PAPVSFGRKD PSSLFAQPAA DNPLRSSVDR LSFDDPLAER SHFSKMGHLG
1301: QDGPTTLDIL PNNIEMNRKL GLRSSSATML DMQRGEFPDV MGGSASTNQL VGNANDVARR KRQGSSANLA VEDTDFSEAV SNWVDTGIPK GSSHSLLKRT
1401: ANPHAATSQA ASTDLSSAIR SKKAGHASSA SSDEHKMESG VTSAAHAVEA TASANKEAGS FGIPPSSNQD ASGPSFSEML KSTKKPPLQY DASESADGGP
1501: GGKGTKKKAK KGKQIDPSLL GFKVHSNRIL MGEIHRPDD
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.