Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66147 | Canola | nucleus | 10.75 | 28.99 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 72.81 | 21.57 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 72.15 | 21.29 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 72.15 | 21.23 |
| KXG34019 | Sorghum | cytosol | 66.45 | 19.75 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 63.82 | 19.32 |
| Zm00001d011983_P003 | Maize | cytosol | 64.25 | 19.08 |
| Zm00001d011981_P007 | Maize | cytosol | 57.89 | 17.07 |
| PGSC0003DMT400006082 | Potato | cytosol | 15.35 | 9.59 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 31.58 | 9.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.36 | 8.98 |
| CDY11817 | Canola | cytosol | 21.27 | 8.49 |
| CDY11819 | Canola | cytosol | 21.05 | 8.36 |
| PGSC0003DMT400028024 | Potato | nucleus | 27.85 | 8.23 |
| Solyc05g015920.2.1 | Tomato | nucleus | 27.85 | 8.14 |
| Solyc05g015930.2.1 | Tomato | cytosol | 27.19 | 8.03 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 27.41 | 7.73 |
| AT1G24300.1 | Thale cress | cytosol | 23.68 | 7.22 |
| AT1G27430.1 | Thale cress | cytosol | 22.37 | 6.84 |
| Bra010950.1-P | Field mustard | cytosol | 18.86 | 6.79 |
| KRG94582 | Soybean | cytosol | 23.68 | 6.68 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 24.34 | 6.67 |
| KRH06906 | Soybean | cytosol | 22.15 | 6.25 |
| Bra010951.1-P | Field mustard | cytosol | 11.62 | 5.0 |
| Os07t0137900-01 | Rice | cytosol | 4.39 | 1.78 |
| CDY66146 | Canola | cytosol | 1.1 | 0.69 |
Protein Annotations
| EnsemblPlants:Os01t0924600-01 | EnsemblPlantsGene:Os01g0924600 | ncoils:Coil | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF41 | ProteinID:BAF07162.1 |
| ProteinID:BAS75974.1 | SEG:seg | UniParc:UPI0000DD8E8C | UniProt:Q0JGG6 | MapMan:35.2 | : |
Description
Conserved hypothetical protein. (Os01t0924600-01)
Coordinates
chr1:-:40483306..40485494
Molecular Weight (calculated)
48696.9 Da
IEP (calculated)
8.169
GRAVY (calculated)
-0.704
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: LERSLSLHER LHRGGQGIHS LERSGSLPGG APLPNLDVVN SLARHHGIGQ LETHGDLYSL GQMPMVPSGV HPQQHRLQEQ LSGNLARLDR HWSDANGQLQ
101: NTLMEPSRIS QMQMEAQKQR RNVEMNLAVD NSHAWASLRN NERSTEQDLS DLFHQKLVQS QQSRGYPDVP VPASFGRKDP SSLFAQPAAD NPLRSPADRL
201: SFDDPLAERS LFAKAGQAGQ EGAANLESLT SSIENSGKLG LRSSSGSMLD MQRGDFSGIM GGGASGNQLV GLANEVPRGK RQGSSASLVG DDTNFAEEAG
301: SNWPEATMPK GGTHSLLKRP PSQHGSATQA LSTDISSTIR LKKAGHASSD DHKLESGGVT SAAQPVDIPV STNKEAGSFI SPSGTSVDGP SFREMVKSTK
401: KPALQQYDAS ESADGGPGGK GAKKKTKKGK QIDPSLLGFK VHSNRIMMGE IHRLDD
101: NTLMEPSRIS QMQMEAQKQR RNVEMNLAVD NSHAWASLRN NERSTEQDLS DLFHQKLVQS QQSRGYPDVP VPASFGRKDP SSLFAQPAAD NPLRSPADRL
201: SFDDPLAERS LFAKAGQAGQ EGAANLESLT SSIENSGKLG LRSSSGSMLD MQRGDFSGIM GGGASGNQLV GLANEVPRGK RQGSSASLVG DDTNFAEEAG
301: SNWPEATMPK GGTHSLLKRP PSQHGSATQA LSTDISSTIR LKKAGHASSD DHKLESGGVT SAAQPVDIPV STNKEAGSFI SPSGTSVDGP SFREMVKSTK
401: KPALQQYDAS ESADGGPGGK GAKKKTKKGK QIDPSLLGFK VHSNRIMMGE IHRLDD
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.