Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010951.1-P | Field mustard | cytosol | 74.09 | 88.57 |
| CDY11817 | Canola | cytosol | 77.49 | 85.9 |
| CDY11819 | Canola | cytosol | 73.54 | 81.1 |
| AT1G27430.1 | Thale cress | cytosol | 58.85 | 49.93 |
| AT1G24300.1 | Thale cress | cytosol | 58.45 | 49.5 |
| VIT_01s0146g00140.t01 | Wine grape | nucleus | 18.8 | 25.16 |
| Solyc05g015930.2.1 | Tomato | cytosol | 30.49 | 25.0 |
| PGSC0003DMT400028024 | Potato | nucleus | 30.41 | 24.94 |
| Solyc05g015920.2.1 | Tomato | nucleus | 30.25 | 24.54 |
| PGSC0003DMT400006082 | Potato | cytosol | 13.43 | 23.29 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 28.12 | 21.38 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 24.33 | 20.45 |
| KRG94582 | Soybean | cytosol | 25.91 | 20.3 |
| KRH06906 | Soybean | cytosol | 25.91 | 20.3 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 24.57 | 20.21 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 24.57 | 20.13 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 24.57 | 20.06 |
| KXG34019 | Sorghum | cytosol | 24.17 | 19.95 |
| Zm00001d011983_P003 | Maize | cytosol | 23.54 | 19.4 |
| Zm00001d011981_P007 | Maize | cytosol | 23.7 | 19.39 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 23.78 | 19.27 |
| Os01t0924600-01 | Rice | plasma membrane | 6.79 | 18.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.22 | 18.46 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 22.67 | 17.74 |
| Bra027468.1-P | Field mustard | nucleus | 16.43 | 12.43 |
Protein Annotations
| Gene3D:3.30.1490.40 | MapMan:35.2 | EnsemblPlantsGene:Bra010950 | EnsemblPlants:Bra010950.1 | EnsemblPlants:Bra010950.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 |
| InterPro:IPR035445 | UniProt:M4D396 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF41 |
| SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI0002545A69 | SEG:seg | : | : |
Description
AT1G24300 (E=1e-167) | LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G27430.1); Has 21766 Blast hits to 10819 proteins in 514 species: Archae - 0; Bacteria - 738; Metazoa - 8216; Fungi - 1952; Plants - 1070; Viruses - 89; Other Eukaryotes - 9701 (source: NCBI BLink).
Coordinates
chrA08:+:17241468..17246676
Molecular Weight (calculated)
140987.0 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.869
Length
1266 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFESREDVRS PAPVPIGSRR RDNKWSSRWG PDDKEKDAKV DKEEPETQSV LGSSLRATDS DARDKWRPRH RMEQLQSGGP NSYRAAPGFG LDKGRSEGPN
0101: LGFAVGRGRA RGTWSTFFGA GGFLRNERVP GKPAPMCRYV RGKLLDLYRN QKPDRMPIDM EDVDSVTQVD LIEPLAFIAP DAEEEESLKG IWKGRITGSE
0201: AHISPGEESL AEKSLGETKV DGGLLGVVSG DSVSMHNSNS GLLGSHGGGL WGASESDQVS HGSPEAVRSG FTKSSVLNAG EPLVEQDYTG KLQQPEIEVN
0301: HSEGTLPPEE FMFTYIDPQG VIQGPFIGSD IISWFEQGFF GTDLQVRLAT APEGTPFQDL GSVMSYLKTE SMQAHINDQI IELEQTSRKA NSEIGLSFAP
0401: VEDSNGSALG HDNVQMKSKS EAYVKPPHLD DRSFLDYSAQ DEEIVFPGRA GVSGYGSAKS STSMHDALMG VSGHSAVPVE SAKVATQNQN ENKLHPFGVL
0501: WSELESSSTP VDLLPNRSYD TGHDQKYLDQ ARDLDHLLTL KSQQQQQQQK IQLQQQQKIQ LQQRQLEQEY QLQQKLLREQ QQSHARNLHF QQILQGQTPD
0601: SRLGQSHDFH RLNNVDQMIL EQQLMDELQS SGHRSQNFTP YMEQLAAGNF GQLPHEGHQK ELLEQLLSEQ MQSQYRQMHS QHGHMQSEPI RSLEYQLLQQ
0701: DQLMRLANGG RQNTLLEELR HIDPQHGQLQ SEPIRSLEYQ WMQQEQLMQL ANRARNNTLL EEHRHIDPLW PSNRNDQLLG AHPGIHRSHS SAGFRPVDFH
0801: QQQQGPPFED HFSHLERNLS YQQQLNQELF EQGLPFERST SGLNLDAVKG LNFSELRDAQ MQSSGRLGNS TPGFSHQNPH IQLGEPHFSE MEPRKERWHG
0901: ADTQLAGGWA ETQFHRPNTE ADHHKMRSEM RRAGEDSNSW MVDGHTDEKS KQLFMELLHQ RPGHQPLESP SMNRGEPYDR MAASGFGFAD HGGRQNASSS
1001: FGSHTSSDEH VNGLPGDRNY MGSLQRDNSL LSGSTDGGRK NETKDFSNML GMSKDVNDIR TWNNAPPKKE GAGLMSFEAQ DRMGKQAVMD SLVQGEVPVA
1101: TLGRQSSSSI SESYSDNLVG EVRKDRLVVP SHGQVSVLLK RPPSSHEGLL EQMSDATNRT AVGNKGSKAS FSEMLKNSSS NSSMKKVAAE PSSDPNEGNK
1201: GGGGKKKGKK GRQLDPALLG FKKTYKADSQ TGKWRSLTTF IKRGFVPETT TSLFQIMRTA ASGDTA
0101: LGFAVGRGRA RGTWSTFFGA GGFLRNERVP GKPAPMCRYV RGKLLDLYRN QKPDRMPIDM EDVDSVTQVD LIEPLAFIAP DAEEEESLKG IWKGRITGSE
0201: AHISPGEESL AEKSLGETKV DGGLLGVVSG DSVSMHNSNS GLLGSHGGGL WGASESDQVS HGSPEAVRSG FTKSSVLNAG EPLVEQDYTG KLQQPEIEVN
0301: HSEGTLPPEE FMFTYIDPQG VIQGPFIGSD IISWFEQGFF GTDLQVRLAT APEGTPFQDL GSVMSYLKTE SMQAHINDQI IELEQTSRKA NSEIGLSFAP
0401: VEDSNGSALG HDNVQMKSKS EAYVKPPHLD DRSFLDYSAQ DEEIVFPGRA GVSGYGSAKS STSMHDALMG VSGHSAVPVE SAKVATQNQN ENKLHPFGVL
0501: WSELESSSTP VDLLPNRSYD TGHDQKYLDQ ARDLDHLLTL KSQQQQQQQK IQLQQQQKIQ LQQRQLEQEY QLQQKLLREQ QQSHARNLHF QQILQGQTPD
0601: SRLGQSHDFH RLNNVDQMIL EQQLMDELQS SGHRSQNFTP YMEQLAAGNF GQLPHEGHQK ELLEQLLSEQ MQSQYRQMHS QHGHMQSEPI RSLEYQLLQQ
0701: DQLMRLANGG RQNTLLEELR HIDPQHGQLQ SEPIRSLEYQ WMQQEQLMQL ANRARNNTLL EEHRHIDPLW PSNRNDQLLG AHPGIHRSHS SAGFRPVDFH
0801: QQQQGPPFED HFSHLERNLS YQQQLNQELF EQGLPFERST SGLNLDAVKG LNFSELRDAQ MQSSGRLGNS TPGFSHQNPH IQLGEPHFSE MEPRKERWHG
0901: ADTQLAGGWA ETQFHRPNTE ADHHKMRSEM RRAGEDSNSW MVDGHTDEKS KQLFMELLHQ RPGHQPLESP SMNRGEPYDR MAASGFGFAD HGGRQNASSS
1001: FGSHTSSDEH VNGLPGDRNY MGSLQRDNSL LSGSTDGGRK NETKDFSNML GMSKDVNDIR TWNNAPPKKE GAGLMSFEAQ DRMGKQAVMD SLVQGEVPVA
1101: TLGRQSSSSI SESYSDNLVG EVRKDRLVVP SHGQVSVLLK RPPSSHEGLL EQMSDATNRT AVGNKGSKAS FSEMLKNSSS NSSMKKVAAE PSSDPNEGNK
1201: GGGGKKKGKK GRQLDPALLG FKKTYKADSQ TGKWRSLTTF IKRGFVPETT TSLFQIMRTA ASGDTA
0001: MAEGKFDLPD DLILSKSSDQ LKELASDNSI PLSPQWLYTK SSESKMDVRS PTPMPMGNPS DPNLKDAWRL DAPEDKKDWK KIVSENETNR RWREEERETG
0101: LLGARKVDRR KTERRIDNVS SRETGEVKTT AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVEINKDKEE PQSESQSVVS NVRATSERDS
0201: DPRDKWRPRH RMESQSGVPT SYRTAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSASAPV FRYPRGKLLD MYRKQKPDPS LGRIPTEMDE
0301: VASITQVALI EPLAFIAPDT EEEASINGIW KGRIISSEVY TSSGEESLGE NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSFGAGY QVSHGSPEAV RSVFTKSPVL DGSESVVGSF EQDYMGKLQQ PDVEVDQSEA AMPPEDFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLANAPEG TPFQDLGRVM SYLKTESAHA HISNQESELE ETRLKANSDT GLSIAPVAES NDSSSMNGTS RSFSVYNNPS AQDNFQRKSE
0601: SEFYATPPHT EDRSFLDFST QDEEIVFPGR AGVSGYASVK SSTSMHDAFM EVSGQSAIPV ESTKAATQKQ HENKLHPFGV LWSELESSNV PVNLLPNRSY
0701: DAMGEPTGAI DNRPIDSRRN TQVDPNMSLD GLASNRMSQF EHLSNRFNLG DQLSSNQHNQ QQFQNRDMLS HSHIGDQAQD LDYLITLQLQ QQQKIQLQQQ
0801: QKIQLQQQQK IQLQQQQKMQ LQQHQLEQEH QLHQKLLQEQ QQSHARQLHY QQILQGQTPD SRFGQSHDFP RSNNVDQMLL EHQLMNELQK SSGHPSQNFA
0901: PYIEQLAAGN FGQLPHEGHQ RELLEQLLST KMQSQYGPMQ SPYGQLQSEP TRSLEYQLLQ QEQLMQLANG VRHNTLLEEQ RHIDPLWPSD HNDQLLRSHP
1001: GIQRSRSSTG FRQLDFHQQQ QRPPFEDQFG QLERNLLYQQ QLRQELFEQG LPFERSASLP VSVSGMNLDP VNGLGLSQGL ELRDATTHMQ IGNSTLGFNH
1101: QNPRIPIGEP HFSQLESMEG RWSGADTQVV GDWAESQLHR SNIDAEHHKM RSESRRMGED SNSWMLGGTT EDRSKQLFME LLHQRPGHQS AESPSMNRGQ
1201: SFDRMAPSGL TPGIQTLGGY SDHGGSHNAP STFGARAFSD EQINRSSGDR NNMGSLHRNN SLLSGIIDGG RSTQNETQAF SNMYAMNKDA NDIKTWNNVP
1301: PKNEGMGRMM SFEAQDRMGK QAVLDSLVHG ELPVVTPGQQ SSLNISDQYS DNLVGEDRRK DRLVVPSHGQ NSVLLKRPPS SHSSSSHEGL IERISDTASR
1401: TAASSYSGIE GGVRRESGAA GNKGSTSEAT SFSEMLKKSN SMKKVAAESN DVTEGSKGGG GKKKGKKGRQ IDPALLGFKV TSNRIMGEIH RADDF
0101: LLGARKVDRR KTERRIDNVS SRETGEVKTT AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVEINKDKEE PQSESQSVVS NVRATSERDS
0201: DPRDKWRPRH RMESQSGVPT SYRTAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSASAPV FRYPRGKLLD MYRKQKPDPS LGRIPTEMDE
0301: VASITQVALI EPLAFIAPDT EEEASINGIW KGRIISSEVY TSSGEESLGE NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSFGAGY QVSHGSPEAV RSVFTKSPVL DGSESVVGSF EQDYMGKLQQ PDVEVDQSEA AMPPEDFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLANAPEG TPFQDLGRVM SYLKTESAHA HISNQESELE ETRLKANSDT GLSIAPVAES NDSSSMNGTS RSFSVYNNPS AQDNFQRKSE
0601: SEFYATPPHT EDRSFLDFST QDEEIVFPGR AGVSGYASVK SSTSMHDAFM EVSGQSAIPV ESTKAATQKQ HENKLHPFGV LWSELESSNV PVNLLPNRSY
0701: DAMGEPTGAI DNRPIDSRRN TQVDPNMSLD GLASNRMSQF EHLSNRFNLG DQLSSNQHNQ QQFQNRDMLS HSHIGDQAQD LDYLITLQLQ QQQKIQLQQQ
0801: QKIQLQQQQK IQLQQQQKMQ LQQHQLEQEH QLHQKLLQEQ QQSHARQLHY QQILQGQTPD SRFGQSHDFP RSNNVDQMLL EHQLMNELQK SSGHPSQNFA
0901: PYIEQLAAGN FGQLPHEGHQ RELLEQLLST KMQSQYGPMQ SPYGQLQSEP TRSLEYQLLQ QEQLMQLANG VRHNTLLEEQ RHIDPLWPSD HNDQLLRSHP
1001: GIQRSRSSTG FRQLDFHQQQ QRPPFEDQFG QLERNLLYQQ QLRQELFEQG LPFERSASLP VSVSGMNLDP VNGLGLSQGL ELRDATTHMQ IGNSTLGFNH
1101: QNPRIPIGEP HFSQLESMEG RWSGADTQVV GDWAESQLHR SNIDAEHHKM RSESRRMGED SNSWMLGGTT EDRSKQLFME LLHQRPGHQS AESPSMNRGQ
1201: SFDRMAPSGL TPGIQTLGGY SDHGGSHNAP STFGARAFSD EQINRSSGDR NNMGSLHRNN SLLSGIIDGG RSTQNETQAF SNMYAMNKDA NDIKTWNNVP
1301: PKNEGMGRMM SFEAQDRMGK QAVLDSLVHG ELPVVTPGQQ SSLNISDQYS DNLVGEDRRK DRLVVPSHGQ NSVLLKRPPS SHSSSSHEGL IERISDTASR
1401: TAASSYSGIE GGVRRESGAA GNKGSTSEAT SFSEMLKKSN SMKKVAAESN DVTEGSKGGG GKKKGKKGRQ IDPALLGFKV TSNRIMGEIH RADDF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I983]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.