Factsheet for Bra010951.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66146	Canola	cytosol	52.41	76.55
Bra010950.1-P	Field mustard	cytosol	88.57	74.09
AT1G27430.1	Thale cress	cytosol	59.02	41.89
AT1G24300.1	Thale cress	cytosol	58.36	41.34
PGSC0003DMT400028024	Potato	nucleus	29.37	20.14
Solyc05g015930.2.1	Tomato	cytosol	29.08	19.95
VIT_01s0146g00140.t01	Wine grape	nucleus	17.66	19.77
Solyc05g015920.2.1	Tomato	nucleus	28.61	19.41
VIT_14s0068g01650.t01	Wine grape	nucleus	27.38	17.42
PGSC0003DMT400006082	Potato	cytosol	11.71	16.99
TraesCS3D01G428900.1	Wheat	cytosol	23.32	16.4
KRG94582	Soybean	cytosol	25.02	16.4
KRH06906	Soybean	cytosol	24.83	16.27
TraesCS3A01G436500.1	Wheat	endoplasmic reticulum, plasma membrane	23.51	16.18
TraesCS3B01G470800.2	Wheat	cytosol	23.51	16.12
HORVU3Hr1G095420.3	Barley	cytosol, nucleus	23.32	15.94
KXG34019	Sorghum	cytosol	22.85	15.78
GSMUA_Achr7P02660_001	Banana	cytosol	22.38	15.17
Zm00001d011981_P007	Maize	cytosol	22.1	15.13
Zm00001d011983_P003	Maize	cytosol	21.91	15.1
GSMUA_Achr4P15970_001	Banana	cytosol	22.57	14.77
GSMUA_AchrUn_...	Banana	cytosol	21.62	14.38
Os01t0924600-01	Rice	plasma membrane	5.0	11.62
Bra027468.1-P	Field mustard	nucleus	14.92	9.44

Protein Annotations

EnsemblPlants:Bra010951.1	EnsemblPlants:Bra010951.1-P	EnsemblPlantsGene:Bra010951	Gene3D:3.30.1490.40	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GYF	InterPro:GYF-like_dom_sf	InterPro:IPR003169	InterPro:IPR035445	ncoils:Coil
PANTHER:PTHR14445	PANTHER:PTHR14445:SF41	PFAM:PF02213	PFscan:PS50829	SEG:seg	SMART:SM00444
SUPFAM:SSF55277	UniParc:UPI0002545A6A	UniProt:M4D397	MapMan:35.2	:	:

Description

AT1G27430 (E=3e-158) | GYF domain-containing protein

Coordinates

chrA08:+:17247878..17251474

Molecular Weight (calculated)

118488.0 Da

IEP (calculated)

5.512

GRAVY (calculated)

-0.807

Length

1059 amino acids

Sequence
(BLAST)

0001: MEQVQSGGPA SYRAAPGFGL DKGRSEGPNI GFTVGRGRAR GTWSAFFGAG GFLRNESVPG KPAPTCRYVR GKLLDLYRNQ KPDRMPIDME EVDSVTQVAL
0101: IEPLAFIAPG VEEEESLKGI WKGRITSSEA HTSPGEESLA EESMGETKVD GALLGVMSGD SVSMHNSNSG VLGSHNGGLW GASESDQVSR GSPEAVRSAF
0201: DKSSVLDADE PIVTGKLQQP DIEVNHSEGT LPPEEFMFSY IDPQGVIQGP FIGSDIISWF EQGFFGTDLQ VRLATAPEGT PFQDLGSVMS YLKTESMQAH
0301: INDQIIELEQ TSRKANSEIG LSFAPVQESN GSALGHDNVQ IQSKSEAYVK PPHVDDRSFL DFSAQDEEIV FPGRARVSGY GSAKSSTSMH DALMGVSGHP
0401: AIPVESAKVA TQNQNENKLH PFGVLWSELE SSSTPVDLLP NRSYDDQKYL DQAQDLDHLT LQLQQQQQQK IQLQHQQQQK IQLQQQQKIQ LQQRQLEQEY
0501: QLQQKLLQEQ QQSHARNLHF QQILQGQTPD SRLGQSHDFH RLNNVDQMLL EQQLMDELQS SGHRSQNFTP YMEQLAAGNF GQLHHEGHQK ELLEQLLSEQ
0601: MQSQYRQMHS QHGHMQSEPI RSLEYQLLQQ EQLMRLANGG RQNTLLEELR HIDPQHGQMQ SEPIRSLEYQ IMQQEQLMQL ADRARHNTLL EEHRHIDPLW
0701: PSNRNDQLLG AHPGIHRSHS SAGFRPVDFH QQQQRPPFED HFSHLERNLS YQQQLNQELF EQGLPFERST SLPRNTSGLN LDAVKGLNLS ELRDAQMQSS
0801: GRLGNSTPGF SHQNPHIQLG EPHFSEMEPR KERWHGADTQ LAGGWPETQF HRSNTEADHH KMRSEMSRVG EDSNSWMVDG HTDEKSKQLF MELLHQRPGH
0901: QPLESPSMNR GEPYDRMAAS GFGFADHGGR QNASSSFGSH ASSDEHVNGL PGDGNYMGSL QRDNSLLSGS TDGGRKNETK DFSNMLGMSK DVNDIRTWNN
1001: APPKKEGAGL MSFEAQDRMG KQAVMDSLVQ GEVPVATLGR QSSSSISGMY LPEFRFRFP

Best Arabidopsis Sequence Match ( AT1G27430.1 )
(BLAST)

0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF

Arabidopsis Description

GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.