Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G470800.2 | Wheat | cytosol | 93.61 | 93.92 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 90.65 | 93.29 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 92.45 | 93.11 |
| Os01t0924600-01 | Rice | plasma membrane | 21.23 | 72.15 |
| KXG34019 | Sorghum | cytosol | 63.81 | 64.47 |
| Zm00001d011983_P003 | Maize | cytosol | 62.06 | 62.63 |
| Zm00001d011981_P007 | Maize | cytosol | 59.03 | 59.15 |
| CDY66147 | Canola | nucleus | 3.74 | 34.32 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 33.74 | 33.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.39 | 33.46 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 33.23 | 31.83 |
| Solyc05g015920.2.1 | Tomato | nucleus | 29.48 | 29.28 |
| PGSC0003DMT400028024 | Potato | nucleus | 29.1 | 29.21 |
| CDY66146 | Canola | cytosol | 13.48 | 28.83 |
| Solyc05g015930.2.1 | Tomato | cytosol | 28.58 | 28.69 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 30.52 | 28.41 |
| KRG94582 | Soybean | cytosol | 29.35 | 28.16 |
| KRH06906 | Soybean | cytosol | 29.23 | 28.03 |
| AT1G27430.1 | Thale cress | cytosol | 26.39 | 27.41 |
| AT1G24300.1 | Thale cress | cytosol | 26.26 | 27.22 |
| PGSC0003DMT400006082 | Potato | cytosol | 12.06 | 25.62 |
| CDY11819 | Canola | cytosol | 18.65 | 25.17 |
| CDY11817 | Canola | cytosol | 18.52 | 25.13 |
| Bra010950.1-P | Field mustard | cytosol | 20.06 | 24.57 |
| Bra010951.1-P | Field mustard | cytosol | 15.94 | 23.32 |
Protein Annotations
| Gene3D:3.30.1490.40 | MapMan:35.2 | UniProt:A0A287MDQ3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | EnsemblPlantsGene:HORVU3Hr1G095420 | EnsemblPlants:HORVU3Hr1G095420.3 | InterPro:IPR003169 |
| InterPro:IPR035445 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF41 | SMART:SM00444 |
| SUPFAM:SSF55277 | UniParc:UPI000B46DCE9 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:650047115..650053911
Molecular Weight (calculated)
171808.0 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.971
Length
1550 amino acids
Sequence
(BLAST)
(BLAST)
0001: PARIRHGREE AGSIRRPRER DALSLGIDED RSTAAAMGFV DDPKDQQHLE NSIPLSPQWL YAKPSDAKIS APHGSLLEPS EKDVRMLEGS GAKKERRRNA
0101: FDAGWLDEER ETSLLGRRDH KKEVDREVEN RKNDRRSDNV SARDNNDSRP APTSGRWDDG STRNSGNEGR RDGKWSLRWG PDDKEKDSKP EKKMDAEKDE
0201: PHGEKHTLPV RLLPESDSRD KWRPRHRQEP QTGGTATYRV APGFGLEKGR VKESNVGFAP GRGRANPNSV PSFSRPSSAG PIGAPPVYGR RAASAGAFRY
0301: PRGKLLDIYR QQKVVQSFED GRRMLEEVPP ITLSSSVKPL AFVTPDNNEE AVLEDIRKGR VTSSEATNST ASQKERNKDL EAFGIDANKD KSAEAFSGLS
0401: QEGSAALISE KDAFYNDGML TGGITGPPKK PADENAPSHP HGLSGMRDDT QFNEVKSSAD IDPSTKLPDD SNAQFNVNVE YPTGQASYTE TKAGGQESYP
0501: EELTLYYLDP QGGVQGPFMG TDIVSWYEDG YFGLELPVRL AQAPDDAPFR PLSDLMPYLG HKPQSLPPVS RGGSAESPDS VHNNFEDALP TSGSFGKSDQ
0601: TTKADSGNYA ANPTRGDQEA PLQSHTSWFP SVEAQKTEAN PDIRQQRIPE TVSHDAEEVL YTGRPTSGMG QSRPDFDNDR ADFQLASVDS RSGVREANLP
0701: KQDAPRENEL SPLGLLWSEL EGMHPKQPLS SNVLGVNERR NPKQTAPKDI PPANIRHGPL SRMNEAPAVR DEWSANLGRL DSINDANMSG LISQVEPELG
0801: HLNYEEQMLL TQIRREQLQQ EQMMGRNNLE FPGQFAGQVF DSLHQHRQSI NPPAPEVEHL LRVQFELEHQ QRRQQLQQEQ HRQQLQQEQH QRQLQQEQHQ
0901: RQLQQRQAQL LQQQQQQQQQ QLIIEQMLQQ QLQSSNFGQA NMVDQVLLRE QLLNDLHHQP HHFQRQHDAA IEQLIQAKFG HGHHREQHND MLDVLSRSNQ
1001: RQALPLEQQI LLGLHHDQLQ TQQLANAIRQ HAGREEERHL GGGWPMDDPS QFIRTGTSPN QSHTSRLGQF DLLQSLQRSS SVEHHDHLDR SLSMHERLHR
1101: GGQGIHSLER SGSLPGGAPL PNPDVVNALA RHHGLGQMET HGDLYSAGQM PMHASGGVHP QQHRLQEQLS GSHMGRLERN WSDANGQLQN SLMEASRINQ
1201: MQIEAEKQRR NVEMNLPIDN PHAWASLMNN ERNPEAELSD MIHQKLVLQA QQSRGFPDVP PTASFGRKDP SSLFAQPAAD NPLRSSVDRL SFDDPLAERS
1301: HFSKMGHLGQ DGPTSLDILP NNIEMNRKLG VRSSSATMLD MQRGEFPDVM GGSVSTNQLV GNANDVARRK RQGSSANLAV EDTDFSEAVS NWVDTGISKG
1401: SSHSLLKRTA NPHTATSQAQ AASTDLSSTI RSKKAGHASS ASSDEHKMES GVTSAAHGVE AAASANKEAG TFGIPPSSNQ DASGPSFSEM LKSTKKPPLQ
1501: YDASESADGG PGGKGTKKKA KKGKQIDPSL LGFKVHSNRI LMGEIHRPDD
0101: FDAGWLDEER ETSLLGRRDH KKEVDREVEN RKNDRRSDNV SARDNNDSRP APTSGRWDDG STRNSGNEGR RDGKWSLRWG PDDKEKDSKP EKKMDAEKDE
0201: PHGEKHTLPV RLLPESDSRD KWRPRHRQEP QTGGTATYRV APGFGLEKGR VKESNVGFAP GRGRANPNSV PSFSRPSSAG PIGAPPVYGR RAASAGAFRY
0301: PRGKLLDIYR QQKVVQSFED GRRMLEEVPP ITLSSSVKPL AFVTPDNNEE AVLEDIRKGR VTSSEATNST ASQKERNKDL EAFGIDANKD KSAEAFSGLS
0401: QEGSAALISE KDAFYNDGML TGGITGPPKK PADENAPSHP HGLSGMRDDT QFNEVKSSAD IDPSTKLPDD SNAQFNVNVE YPTGQASYTE TKAGGQESYP
0501: EELTLYYLDP QGGVQGPFMG TDIVSWYEDG YFGLELPVRL AQAPDDAPFR PLSDLMPYLG HKPQSLPPVS RGGSAESPDS VHNNFEDALP TSGSFGKSDQ
0601: TTKADSGNYA ANPTRGDQEA PLQSHTSWFP SVEAQKTEAN PDIRQQRIPE TVSHDAEEVL YTGRPTSGMG QSRPDFDNDR ADFQLASVDS RSGVREANLP
0701: KQDAPRENEL SPLGLLWSEL EGMHPKQPLS SNVLGVNERR NPKQTAPKDI PPANIRHGPL SRMNEAPAVR DEWSANLGRL DSINDANMSG LISQVEPELG
0801: HLNYEEQMLL TQIRREQLQQ EQMMGRNNLE FPGQFAGQVF DSLHQHRQSI NPPAPEVEHL LRVQFELEHQ QRRQQLQQEQ HRQQLQQEQH QRQLQQEQHQ
0901: RQLQQRQAQL LQQQQQQQQQ QLIIEQMLQQ QLQSSNFGQA NMVDQVLLRE QLLNDLHHQP HHFQRQHDAA IEQLIQAKFG HGHHREQHND MLDVLSRSNQ
1001: RQALPLEQQI LLGLHHDQLQ TQQLANAIRQ HAGREEERHL GGGWPMDDPS QFIRTGTSPN QSHTSRLGQF DLLQSLQRSS SVEHHDHLDR SLSMHERLHR
1101: GGQGIHSLER SGSLPGGAPL PNPDVVNALA RHHGLGQMET HGDLYSAGQM PMHASGGVHP QQHRLQEQLS GSHMGRLERN WSDANGQLQN SLMEASRINQ
1201: MQIEAEKQRR NVEMNLPIDN PHAWASLMNN ERNPEAELSD MIHQKLVLQA QQSRGFPDVP PTASFGRKDP SSLFAQPAAD NPLRSSVDRL SFDDPLAERS
1301: HFSKMGHLGQ DGPTSLDILP NNIEMNRKLG VRSSSATMLD MQRGEFPDVM GGSVSTNQLV GNANDVARRK RQGSSANLAV EDTDFSEAVS NWVDTGISKG
1401: SSHSLLKRTA NPHTATSQAQ AASTDLSSTI RSKKAGHASS ASSDEHKMES GVTSAAHGVE AAASANKEAG TFGIPPSSNQ DASGPSFSEM LKSTKKPPLQ
1501: YDASESADGG PGGKGTKKKA KKGKQIDPSL LGFKVHSNRI LMGEIHRPDD
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.