Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G470800.2 | Wheat | cytosol | 96.08 | 93.66 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 94.22 | 92.2 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 93.29 | 90.65 |
| Os01t0924600-01 | Rice | plasma membrane | 19.32 | 63.82 |
| KXG34019 | Sorghum | cytosol | 64.87 | 63.69 |
| Zm00001d011983_P003 | Maize | cytosol | 62.82 | 61.59 |
| Zm00001d011981_P007 | Maize | cytosol | 60.82 | 59.21 |
| CDY66147 | Canola | nucleus | 3.78 | 33.73 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 34.86 | 33.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.46 | 32.58 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 33.67 | 31.34 |
| PGSC0003DMT400028024 | Potato | nucleus | 30.01 | 29.27 |
| CDY66146 | Canola | cytosol | 14.08 | 29.24 |
| Solyc05g015920.2.1 | Tomato | nucleus | 30.28 | 29.21 |
| Solyc05g015930.2.1 | Tomato | cytosol | 29.55 | 28.82 |
| VIT_14s0068g01650.t01 | Wine grape | nucleus | 31.08 | 28.11 |
| KRG94582 | Soybean | cytosol | 29.95 | 27.91 |
| KRH06906 | Soybean | cytosol | 29.61 | 27.6 |
| AT1G27430.1 | Thale cress | cytosol | 26.89 | 27.14 |
| AT1G24300.1 | Thale cress | cytosol | 26.49 | 26.69 |
| PGSC0003DMT400006082 | Potato | cytosol | 12.15 | 25.07 |
| CDY11819 | Canola | cytosol | 18.92 | 24.83 |
| CDY11817 | Canola | cytosol | 18.79 | 24.78 |
| Bra010950.1-P | Field mustard | cytosol | 20.45 | 24.33 |
| Bra010951.1-P | Field mustard | cytosol | 16.4 | 23.32 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 15.47 | 13.7 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G428900.1 | EnsemblPlantsGene:TraesCS3D01G428900 | Gene3D:3.30.1490.40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | ncoils:Coil | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF41 | PFAM:PF02213 | PFscan:PS50829 | SEG:seg | SMART:SM00444 | SUPFAM:SSF55277 |
| TIGR:cd00072 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:543502874..543509376
Molecular Weight (calculated)
166748.0 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.942
Length
1506 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAERKLDRFA ALGKDALSLG IEEDRSTAAA MGFVDDPKDQ QHLENSIPLS PQWLYAKPSD AKISAAHGSL LEPSEKDVRM LEGSGAKKER RRNAFDAGWL
0101: DEERETSLLG RRDHKKEVDR EVENRKNDRR SDNVSARDNN DSRAAPTSGR WDDGSTRNSG NEGRRDGKWS LRWGPDDKEK DSKPEKKMDA EKDEPHGEKQ
0201: TLPVRLLPES DSRDKWRPRH RQETQTSGTA TYRAAPGFGL EKGRVKESNV GFAPGRGRAN PNSVPSFSRP SSAGPIGAPP VYGRRAATAG AFRYPRGKLL
0301: DIYRQQKAVQ SFEDGRRMLE EVPPITLSTS VKPLAFVTPD NNEEAVLEDI RKGRVTSSEA TNTTALQKER NKDLEAFGID ANKDKSAEAF SGLSHEGSAA
0401: LISEKDAFYN EGMFAGGITG PPKKPTEENA PSHPHGLSGI REDTKFNEVK PSADIDPSTK LPDDSNAQFN VNVDYPTGQA SYTETKAGGQ DSYPEELTLY
0501: YLDPQGGVQG PFMGTDIVSW YEDGYFGLEL PVRLAQAPDD APFRPLSDLM PYLGHKPQSL PPVSRGGSAE SPDSVHNNFE DALPTSGSFG KNDQTSKADS
0601: GNYAANPTRG DQEAPVQSRT GWFPSVEAQK TEANPDIRQQ RIPETVSQDA EEVLYTGRPT SGMGQSRPDF DNDRADFQLT SLDSRSGVGE ANLPKQDAPR
0701: ENELSPLGLL WSELEGMHPK QPLSSNVLGV NERRNPKPSA PKDIPPANIR HGPLSRMNEA PVVRDEWPAN LGRLDSINDA NMSGLISQVE PELGHLNYEE
0801: QMLLTQIRRE QLQQEQMMGR NNLEFPGQFA GQVFDSLHQH RQSINPPAPE VEHLLRVQFE LEHQQRRQQL QQEQHRQQLQ QEQHQRQLQQ EQHQRQLQQR
0901: QAQLLQQQQQ QLILEQMLQQ QLQSSNFGQA NMVDQVLLRE QLLNDLHHQP HHFQRQHDAA IEQLIQAKFG HGHHREQHND MLDVLSRSNQ RQALPLEQQI
1001: LLGLHHDQLQ TQQLANAIRQ HAGREEERHL SGGWPMDDPS QFIRTGTSPN QSHASRLGQF DLLQSLQRSS SVEHHDHLDR SLSMHERLHR GGQGIHSLDR
1101: SGSLPGGAPL PNPDVVNALA RHHGLGQMET HGDLYSAGQM PMHASGVHPQ QHRLQEQLSG SHMGRLERNW SDANGQLQNS LMEASRINQL QIEAEKQRRN
1201: VEMNLPIDNP HAWASLMNNE RNPEAELSDM IHQKLVLQAQ QSRGFPDVPA TASFGQRSHF SKMGHLGQDG PTTIDILPNN IEMNRKLGLR SSSATMLDMQ
1301: RGEFPDVMGG SASTNQLVGS ASDVARRKRQ GSSANLAVED TDFSEAVSNW VDTGIPKGSS HSLLKRTANP HATTSQAAST DLSSAIRSKK AGHASSASSD
1401: EHKMEPGVTS AAHAVEATAS ANKEAGSFGI PPSSNQDASG PSFSEMLKST KKPPLQYDAS ESADGGPGGK GTKKKAKKGK QIDPSLLGFK VHSNRILMGE
1501: IHRPDD
0101: DEERETSLLG RRDHKKEVDR EVENRKNDRR SDNVSARDNN DSRAAPTSGR WDDGSTRNSG NEGRRDGKWS LRWGPDDKEK DSKPEKKMDA EKDEPHGEKQ
0201: TLPVRLLPES DSRDKWRPRH RQETQTSGTA TYRAAPGFGL EKGRVKESNV GFAPGRGRAN PNSVPSFSRP SSAGPIGAPP VYGRRAATAG AFRYPRGKLL
0301: DIYRQQKAVQ SFEDGRRMLE EVPPITLSTS VKPLAFVTPD NNEEAVLEDI RKGRVTSSEA TNTTALQKER NKDLEAFGID ANKDKSAEAF SGLSHEGSAA
0401: LISEKDAFYN EGMFAGGITG PPKKPTEENA PSHPHGLSGI REDTKFNEVK PSADIDPSTK LPDDSNAQFN VNVDYPTGQA SYTETKAGGQ DSYPEELTLY
0501: YLDPQGGVQG PFMGTDIVSW YEDGYFGLEL PVRLAQAPDD APFRPLSDLM PYLGHKPQSL PPVSRGGSAE SPDSVHNNFE DALPTSGSFG KNDQTSKADS
0601: GNYAANPTRG DQEAPVQSRT GWFPSVEAQK TEANPDIRQQ RIPETVSQDA EEVLYTGRPT SGMGQSRPDF DNDRADFQLT SLDSRSGVGE ANLPKQDAPR
0701: ENELSPLGLL WSELEGMHPK QPLSSNVLGV NERRNPKPSA PKDIPPANIR HGPLSRMNEA PVVRDEWPAN LGRLDSINDA NMSGLISQVE PELGHLNYEE
0801: QMLLTQIRRE QLQQEQMMGR NNLEFPGQFA GQVFDSLHQH RQSINPPAPE VEHLLRVQFE LEHQQRRQQL QQEQHRQQLQ QEQHQRQLQQ EQHQRQLQQR
0901: QAQLLQQQQQ QLILEQMLQQ QLQSSNFGQA NMVDQVLLRE QLLNDLHHQP HHFQRQHDAA IEQLIQAKFG HGHHREQHND MLDVLSRSNQ RQALPLEQQI
1001: LLGLHHDQLQ TQQLANAIRQ HAGREEERHL SGGWPMDDPS QFIRTGTSPN QSHASRLGQF DLLQSLQRSS SVEHHDHLDR SLSMHERLHR GGQGIHSLDR
1101: SGSLPGGAPL PNPDVVNALA RHHGLGQMET HGDLYSAGQM PMHASGVHPQ QHRLQEQLSG SHMGRLERNW SDANGQLQNS LMEASRINQL QIEAEKQRRN
1201: VEMNLPIDNP HAWASLMNNE RNPEAELSDM IHQKLVLQAQ QSRGFPDVPA TASFGQRSHF SKMGHLGQDG PTTIDILPNN IEMNRKLGLR SSSATMLDMQ
1301: RGEFPDVMGG SASTNQLVGS ASDVARRKRQ GSSANLAVED TDFSEAVSNW VDTGIPKGSS HSLLKRTANP HATTSQAAST DLSSAIRSKK AGHASSASSD
1401: EHKMEPGVTS AAHAVEATAS ANKEAGSFGI PPSSNQDASG PSFSEMLKST KKPPLQYDAS ESADGGPGGK GTKKKAKKGK QIDPSLLGFK VHSNRILMGE
1501: IHRPDD
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISGLS
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISGLS
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.