Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G267200.2 | Wheat | nucleus | 96.24 | 96.07 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 95.88 | 95.88 |
| EER95850 | Sorghum | cytosol | 59.26 | 61.16 |
| Os07t0137900-01 | Rice | cytosol | 36.8 | 55.64 |
| Zm00001d018770_P003 | Maize | cytosol | 56.03 | 55.44 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 35.21 | 37.82 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 37.04 | 37.08 |
| PGSC0003DMT400013161 | Potato | cytosol | 32.75 | 32.48 |
| Solyc04g080240.2.1 | Tomato | cytosol | 32.92 | 32.37 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 34.92 | 32.35 |
| KRH05805 | Soybean | endoplasmic reticulum | 33.63 | 32.08 |
| KRH15224 | Soybean | endoplasmic reticulum | 34.27 | 30.98 |
| KRH61182 | Soybean | cytosol | 31.92 | 30.4 |
| AT5G42950.1 | Thale cress | cytosol | 30.57 | 30.34 |
| Bra027468.1-P | Field mustard | nucleus | 29.63 | 30.13 |
| KRH51860 | Soybean | cytosol | 30.57 | 28.99 |
| CDY71257 | Canola | cytosol, nucleus | 8.05 | 25.61 |
| CDY32971 | Canola | nucleus | 28.98 | 24.03 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 13.7 | 15.47 |
Protein Annotations
| MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0051607 | InterPro:GYF | InterPro:GYF-like_dom_sf |
| InterPro:IPR003169 | InterPro:IPR035445 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 |
| SMART:SM00444 | SUPFAM:SSF55277 | EnsemblPlantsGene:TraesCS2D01G255400 | EnsemblPlants:TraesCS2D01G255400.2 | TIGR:cd00072 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:308024625..308033560
Molecular Weight (calculated)
185183.0 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.815
Length
1701 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAASPDRAND DLRRRLAVDT PPPPQIAKEK QGLDTGMPLS PQWLMKEPSS QGSRSDATKT SGNGEDMDSS AKKKDVFRAS VLDGETARRD RWRDDEREPN
0101: SGPRWARWRE TDKEQADSRK VEKWSDDLSK FSVDGRRAPQ ERWGDSSNKE GNYDQRREGK WITRWGSSDK ESENWRDRWG DSGKEGDASR EKVFSQFVAH
0201: GKDGNIHDKD TERDDNISRS WKSSHPVGRG RGDSSYHPSQ ISQKPPSLYG YGRGKPDNEI TGFPGSRGKF TPSSGSTNAG STGSSRPFHL GLLSDRPGGA
0301: SGDRTAFRYS RMKLLDIYRT TSHVTDFKMP FDVCEEGSAF MQEEMLEPLA LFAPTTDEAV ILKAIDKGEI INSGVHQVSK DGSVGKSNPD VVPSKQPKLG
0401: GRDDQPGSAD DLKGETAGSL RGVPGNVDSL RTETPSYVVP QRSRFIGDHR LGPTDFPQQM PNVFDQESKV VGMTGVDELT SPIQPYPNPE NLSLYYKDPQ
0501: GRIQGPFSGA DIIGWFEASY FGIDLLVRVA NAPPDAPFLM LGDVMPHLRA KARPPPGFST TKSSDMLMPE TPPTGKFVSS SSSHSGSAGV GVFNSGPSRN
0601: GGAVEAQNRF LESLMSNGMQ GPSAAMTGGL NEYNSSSFGN IAMAGGEMGN SMNYLLAQQR LLERQKSSQN AVPYWSADGI PAAQAQNKDT ASEVSTLHSK
0701: VPSSMADPSR QASQSQNVDL LAMLHSAEKP KAPVGLPPWS NYPESRNVNP NLHVDLTQGP LNMHQNLQNS QQMATAVQQQ NFMPQNQPPL SHLPSEKLLA
0801: EISQDPQLLH MFQQQYLLSQ LQLQSQPPVA PQPQPQLSML DKMILLQQQQ QQQQQQQQLQ QRLQLEQQQL LLQQQHLVSH VAPHGHPNQQ LDDPYGSKHT
0901: TLPAGDSMNL GVRTIQEVLE ADRILTNHGT SQVSSQAFMS MRGMEGVGTS QSSVPTVPLP HEFFMGAPSK ERFPHTQKLG NSASDNTQLS ASMVNTMQTE
1001: VAERYEEASG NYQQVGIGKV ESKPANILSL RSTEASSSAL SEAKGFPETP LNQISEIMSP HNRVQEITNT LDAVELTMAT DAKTPDTQET KKAEKKKKQK
1101: KKQTAVDVGK GAPNTISQHP TLEAEVDASN QAVTKHGLPD DTDELFWGST ARVESSSRAV GPPLGFEPYV NLPPKSLPEG YAINRAEWEP SALSELHAAA
1201: TQKGWKPTQG PRPKSLLEIQ AEEQLRAQRV AADSAKITMP APPVPSGPWN TMSASSEQQF GGAGKSLGGQ ESAGDSRNKR SQLHDLLAEE VLARSSNADN
1301: ENTGNANDVL FPLSPAVVQS DAPAFDDDDF IEAKDSKKNK KKGTKSKGSA AKAPLPVSSI DSSAMSIPAE KGKSSKQAKQ EKEILPAPPS GPSFGDFVPW
1401: KTDQTNFAPA PAWSNDSTKV HKPLSLRDIQ REEERRSGVV QQQPPSPTPA KVSVNQRNHG NASSKQASGS SPSKAVAPVQ MSSNPSNRSK SNAEDDLFWG
1501: PSDHSKQDKK QSEFPSLASQ SKSSMTKDQS SVNRHKSQAS KLPLSTAPSA NLVGKGKAEA ANKQTEAMDF RDWCDSEWSR LTGTNDTSFL EFCIKQSTAE
1601: AEMLLRENVG SLDRNGQFID RFLNYKAFLS TDVIEMAFRA PSNRVPRLNP SSAAKGGPSA EAEQDTGGKK KGKKGKKVSA AVLGFNVVSN RIMMGEIQNV
1701: D
0101: SGPRWARWRE TDKEQADSRK VEKWSDDLSK FSVDGRRAPQ ERWGDSSNKE GNYDQRREGK WITRWGSSDK ESENWRDRWG DSGKEGDASR EKVFSQFVAH
0201: GKDGNIHDKD TERDDNISRS WKSSHPVGRG RGDSSYHPSQ ISQKPPSLYG YGRGKPDNEI TGFPGSRGKF TPSSGSTNAG STGSSRPFHL GLLSDRPGGA
0301: SGDRTAFRYS RMKLLDIYRT TSHVTDFKMP FDVCEEGSAF MQEEMLEPLA LFAPTTDEAV ILKAIDKGEI INSGVHQVSK DGSVGKSNPD VVPSKQPKLG
0401: GRDDQPGSAD DLKGETAGSL RGVPGNVDSL RTETPSYVVP QRSRFIGDHR LGPTDFPQQM PNVFDQESKV VGMTGVDELT SPIQPYPNPE NLSLYYKDPQ
0501: GRIQGPFSGA DIIGWFEASY FGIDLLVRVA NAPPDAPFLM LGDVMPHLRA KARPPPGFST TKSSDMLMPE TPPTGKFVSS SSSHSGSAGV GVFNSGPSRN
0601: GGAVEAQNRF LESLMSNGMQ GPSAAMTGGL NEYNSSSFGN IAMAGGEMGN SMNYLLAQQR LLERQKSSQN AVPYWSADGI PAAQAQNKDT ASEVSTLHSK
0701: VPSSMADPSR QASQSQNVDL LAMLHSAEKP KAPVGLPPWS NYPESRNVNP NLHVDLTQGP LNMHQNLQNS QQMATAVQQQ NFMPQNQPPL SHLPSEKLLA
0801: EISQDPQLLH MFQQQYLLSQ LQLQSQPPVA PQPQPQLSML DKMILLQQQQ QQQQQQQQLQ QRLQLEQQQL LLQQQHLVSH VAPHGHPNQQ LDDPYGSKHT
0901: TLPAGDSMNL GVRTIQEVLE ADRILTNHGT SQVSSQAFMS MRGMEGVGTS QSSVPTVPLP HEFFMGAPSK ERFPHTQKLG NSASDNTQLS ASMVNTMQTE
1001: VAERYEEASG NYQQVGIGKV ESKPANILSL RSTEASSSAL SEAKGFPETP LNQISEIMSP HNRVQEITNT LDAVELTMAT DAKTPDTQET KKAEKKKKQK
1101: KKQTAVDVGK GAPNTISQHP TLEAEVDASN QAVTKHGLPD DTDELFWGST ARVESSSRAV GPPLGFEPYV NLPPKSLPEG YAINRAEWEP SALSELHAAA
1201: TQKGWKPTQG PRPKSLLEIQ AEEQLRAQRV AADSAKITMP APPVPSGPWN TMSASSEQQF GGAGKSLGGQ ESAGDSRNKR SQLHDLLAEE VLARSSNADN
1301: ENTGNANDVL FPLSPAVVQS DAPAFDDDDF IEAKDSKKNK KKGTKSKGSA AKAPLPVSSI DSSAMSIPAE KGKSSKQAKQ EKEILPAPPS GPSFGDFVPW
1401: KTDQTNFAPA PAWSNDSTKV HKPLSLRDIQ REEERRSGVV QQQPPSPTPA KVSVNQRNHG NASSKQASGS SPSKAVAPVQ MSSNPSNRSK SNAEDDLFWG
1501: PSDHSKQDKK QSEFPSLASQ SKSSMTKDQS SVNRHKSQAS KLPLSTAPSA NLVGKGKAEA ANKQTEAMDF RDWCDSEWSR LTGTNDTSFL EFCIKQSTAE
1601: AEMLLRENVG SLDRNGQFID RFLNYKAFLS TDVIEMAFRA PSNRVPRLNP SSAAKGGPSA EAEQDTGGKK KGKKGKKVSA AVLGFNVVSN RIMMGEIQNV
1701: D
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.