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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G267200.2 Wheat nucleus 56.18 37.09
TraesCS2A01G255000.2 Wheat nucleus 55.91 36.98
TraesCS2D01G255400.2 Wheat nucleus 55.64 36.8
EER95850 Sorghum cytosol 52.98 36.16
Zm00001d018770_P003 Maize cytosol 49.87 32.64
GSMUA_Achr4P28310_001 Banana cytosol 31.56 22.41
GSMUA_Achr2P13140_001 Banana cytosol 32.98 21.84
PGSC0003DMT400013161 Potato cytosol 30.93 20.29
Solyc04g080240.2.1 Tomato cytosol 30.49 19.83
VIT_18s0001g12350.t01 Wine grape cytosol 31.91 19.55
Bra027468.1-P Field mustard nucleus 28.18 18.95
AT5G42950.1 Thale cress cytosol 28.44 18.67
KRH05805 Soybean endoplasmic reticulum 29.51 18.62
KRH15224 Soybean endoplasmic reticulum 29.51 17.64
KRH61182 Soybean cytosol 27.91 17.58
KRH51860 Soybean cytosol 27.56 17.28
CDY32971 Canola nucleus 26.93 14.77
CDY71257 Canola cytosol, nucleus 3.29 6.92
Os01t0924600-01 Rice plasma membrane 1.78 4.39
Protein Annotations
EnsemblPlants:Os07t0137900-01EnsemblPlantsGene:Os07g0137900Gene3D:3.30.1490.40GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:GYFInterPro:GYF-like_dom_sfInterPro:IPR003169InterPro:IPR035445ncoils:CoilPANTHER:PTHR14445
PANTHER:PTHR14445:SF36PFAM:PF02213PFscan:PS50829ProteinID:BAF20770.1ProteinID:BAS99982.1SEG:seg
SMART:SM00444SUPFAM:SSF55277UniParc:UPI0000E129BEUniProt:Q0D8Q3MapMan:35.2:
Description
Similar to Grb10 interacting GYF protein 2. (Os07t0137900-01);Hypothetical conserved gene. (Os07t0137900-02)
Coordinates
chr7:+:1996747..2002765
Molecular Weight (calculated)
123296.0 Da
IEP (calculated)
6.127
GRAVY (calculated)
-0.835
Length
1125 amino acids
Sequence
(BLAST)
0001: MAATPDRANA DLRRRLAVDA PPPPPQIAKD KQGLDTEMPL SPQWLMKVGE NKEPSLLGVR SDGSKIPGND EDTSFSVKRK DVFRASVLDG ETGCRERWRD
0101: DEREPNSAPR WNRWRETDKE HGDTRKLERW SDDSSKYSVD GRRPPQERWS DSGNKEGNYD QRRDNKWSAR RGPNDKESEN WRDRWGDSGK DGDAAREKGF
0201: SHYIAHGKDG NSHEKDAERD DNISRSWKSS YPVGRGRGDS SHHPSQNTQK SSATYGYGRG KPDNEIASFP GSRGKFTSGS TNTASSGSSR PFHLGLLSDR
0301: PGGTSGDRTA FRYSRMKLLD IYRTSHVTDF KMPLGGCEEL SAFMQEETLE PLALSAPTTD EAAILKAIDK GDIINSGVHQ ASKDGPVGKN GREDQQGGME
0401: DVKGETAASL RGFPGNTDLP ARADSLRPET SAYVVPQRSR LIGEHRPGPT ADYIQQMPFA LDQESKVAVI TGVDGFATPT YPNPESLSLY YKDPQGQVQG
0501: PFSGADIIGW FEAGYFGIDL LVRVANAPPD APFLLLGDVM PHLRAKARPP PGFAATKPSD MLMPETLSTG NFVSSSNTHA GSASVGAFDS GLSRKDGAVE
0601: AQNRFLESLM SNSVRDPSAE MLAMTAGMTE YGSSGIGNIT VSGGETGNSM TYLLVQKRLL ERQKSLQNPG SFWSGDSIPA AQVQNKDIEA SALHTKLHPP
0701: MADPPRQALQ SQNVDLLAML HSAEKPQAPA SNSGLPAWSN YPEAKNLDPR GHGVDLTQGS LNMHGASVQS SQQATTAIQQ QNFMPLNMSQ IAHLGPEKLR
0801: AEISQDPQLL TRLQHQYLLS QLQLQPQLPV TPQPQPQPQL SMLDKMMLLK QQQQQQMQQQ MQQQQQMQQQ MQQQQKQRLQ LLQLEQQQQQ QLLLQQQHLL
0901: SQVIPHGHSS QQPDDLYGSQ RTSLPTGDSS NLGLQKMKEV LEADRVLTAH GTQEGQQPSD PSIMNKKGME GVGPSQSSVP SLLPHEIFGG VPSKDRYSHP
1001: QKLEDKVNVN TQLKASIVNP MLTEVANRRE DDSDQQEVRS HERGIGIGKT GIMSENILGS GSSEVIGAAP SAPKEFPEAP FDPKPETLSS HISNQVQDLK
1101: ISSENILGGS EPTVATEVKA SDTQD
Best Arabidopsis Sequence Match ( AT5G42950.1 )
(BLAST)
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.