Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P13140_001 | Banana | cytosol | 61.11 | 56.97 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 41.41 | 35.73 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 38.07 | 35.45 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 37.82 | 35.21 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 37.88 | 35.21 |
| EER95850 | Sorghum | cytosol | 36.55 | 35.13 |
| PGSC0003DMT400013161 | Potato | cytosol | 37.12 | 34.29 |
| KRH05805 | Soybean | endoplasmic reticulum | 38.19 | 33.93 |
| Solyc04g080240.2.1 | Tomato | cytosol | 36.93 | 33.81 |
| KRH61182 | Soybean | cytosol | 36.87 | 32.7 |
| Zm00001d018770_P003 | Maize | cytosol | 35.29 | 32.52 |
| AT5G42950.1 | Thale cress | cytosol | 35.1 | 32.44 |
| Bra027468.1-P | Field mustard | nucleus | 33.78 | 31.98 |
| KRH15224 | Soybean | endoplasmic reticulum | 37.88 | 31.88 |
| KRH51860 | Soybean | cytosol | 35.86 | 31.66 |
| Os07t0137900-01 | Rice | cytosol | 22.41 | 31.56 |
| Zm00001d034263_P004 | Maize | cytosol | 17.55 | 28.17 |
| OQU90902 | Sorghum | nucleus | 20.96 | 26.99 |
| CDY71257 | Canola | cytosol, nucleus | 8.84 | 26.17 |
| CDY32971 | Canola | nucleus | 32.58 | 25.15 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 16.48 | 16.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.79 | 16.7 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 16.6 | 16.25 |
Protein Annotations
| MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSMUA_Achr4G28310_001 | EnsemblPlants:GSMUA_Achr4P28310_001 | EnsemblPlants:GSMUA_Achr4T28310_001 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 |
| InterPro:IPR035445 | UniProt:M0SSU3 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 |
| SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI0002964B1A | SEG:seg | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G28310_001]
Coordinates
chr4:-:26744573..26754350
Molecular Weight (calculated)
172967.0 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.719
Length
1584 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANLSNADSR RGLTVEAPPN QNPKDIQGSD NPIPLSPQWL ISKAVDSKEL GPHQDNRLDG VKTSGAGDDL TNTGKKKYVF RPILHDSDSG RRDNWHDEER
0101: ETNSAIRRDR WREGDKEPGE ARRMERWSEN TSKNFGDARR APSERWNDSG NKESDQRRES KWNTRWGPGD KESDSWREKW SDSSKGGNGT SEKGAPVPYL
0201: ISHGKDINNH GKETEGDDHS SRSWRSNYLL GRGRGDSSHQ LQMPVKQPNT FGYSRHLGLS YDKPDGASGD LSTLRYTRMK LLDIYRTTDV QSLRLSIGDF
0301: IEVPSLTQVE PLEPLAFFAP TPDESVIIKG IDKGEIVSSG APQLSKESSV GKINPDTVLS RQSKLGSRHD LLTSGDGCKD DNVDNTKSEN CGPLESPSYE
0401: KRYYQLGQFS KVDANLNSSL FQPNEVNEKG TLILAKNLRF GIHAAKMITK EATCLESSSR YVVPRRSQSA GDHIHSSAHD RKDFSLGVGP VELDMRSFHL
0501: QKDVESKNNV TPPSPEDLSL YYKDPQGQIQ GPFSGGDLIG WFEAGYFGID LQVRHASSPA DAPFLPLGDV MPHLRMKAGP PPGFGVVKHS VSFDESHKGK
0601: IVSSNSIYAG LGETNIFKTG QRNMHDAATE AQNRFLESLM SGNMNGSPSD NFSVSAGIQE SGGSSSSCLP SVVGENGNDM NYLLAQAKLL ERQRVSLNPL
0701: SYWSGGDASS MASKTNMISD SSVAHAKLLP SAGDLSPQIL QSPQHVDLLS LLHAGADKPP SQSANSAVSS HSNFANAPTV NNPIRGGVEY PSDVVSMHYN
0801: QYMPNQIRLG VQRQVLQSAN QPPLPQLFTT HGDLSSCLVP PDKMLSSEIN QDPRLSSLLQ QQYLLSQLQL HSQTPAAQLP LLEKFMLLQQ QQKQEQQQHI
0901: LSKVLSGHQS HQQFGDPSYG QAPAVMPAHN SAMDHLVLQR AHEPLKINQQ MPLAYERTGQ LSYQPNLNLQ GTLDVSSVSS GPLHLPHQII DQTAEASDAQ
1001: FSLENDDSVD PATATKPVMA DSSTLSEAME RSVSLTFSEA MEKPEEDSRT SHDCVSSISD QLHDTNISSA TLSQWAWKST PGLKPKSLLE IQQEEQLRAQ
1101: RETSHSEIVA TATSARILSV PWAGLVTNLE SKSSHDTIQA ATSTLLVNSE NTLKSKNSKS QLHDLLAEEV LAKSNKEDIE PLANNAQDSL LQSPSITEAH
1201: VDTSTINDDD FVEAKDTRKG RKKASKSKAS VVKIPQSVVS SELPAAPSPI EKAKSTRQAQ QDKDYLPAPP TGPSLGDFVL WKGDQATSVP PPAWSGDSGK
1301: PQRPMPLRDI QMEQEKRSGT LQQQVPIPTP VKQQPSHISR GSGTSRQLFG SSPSNTASSI QLISQVPAPK SRDEDDLFWG PLDQTKPNPK SSGSWGIKGT
1401: TSKGASGAGS GRKPSGSRPV DQSLSSFSSP SPSVSKEAME FRDWCVNEWI GLTGTNDTSF LEFCIKQSTS EAEMLLRENL GSMDPNHEFI DKFLNYKEFL
1501: PSDVLEIAFQ LQKPHNPSTG SASHRNSNTT AATEADGAEE GLDGPSKGRV KKKGKKGQKV SASILGFNVV SNRIMMGEIQ SIQD
0101: ETNSAIRRDR WREGDKEPGE ARRMERWSEN TSKNFGDARR APSERWNDSG NKESDQRRES KWNTRWGPGD KESDSWREKW SDSSKGGNGT SEKGAPVPYL
0201: ISHGKDINNH GKETEGDDHS SRSWRSNYLL GRGRGDSSHQ LQMPVKQPNT FGYSRHLGLS YDKPDGASGD LSTLRYTRMK LLDIYRTTDV QSLRLSIGDF
0301: IEVPSLTQVE PLEPLAFFAP TPDESVIIKG IDKGEIVSSG APQLSKESSV GKINPDTVLS RQSKLGSRHD LLTSGDGCKD DNVDNTKSEN CGPLESPSYE
0401: KRYYQLGQFS KVDANLNSSL FQPNEVNEKG TLILAKNLRF GIHAAKMITK EATCLESSSR YVVPRRSQSA GDHIHSSAHD RKDFSLGVGP VELDMRSFHL
0501: QKDVESKNNV TPPSPEDLSL YYKDPQGQIQ GPFSGGDLIG WFEAGYFGID LQVRHASSPA DAPFLPLGDV MPHLRMKAGP PPGFGVVKHS VSFDESHKGK
0601: IVSSNSIYAG LGETNIFKTG QRNMHDAATE AQNRFLESLM SGNMNGSPSD NFSVSAGIQE SGGSSSSCLP SVVGENGNDM NYLLAQAKLL ERQRVSLNPL
0701: SYWSGGDASS MASKTNMISD SSVAHAKLLP SAGDLSPQIL QSPQHVDLLS LLHAGADKPP SQSANSAVSS HSNFANAPTV NNPIRGGVEY PSDVVSMHYN
0801: QYMPNQIRLG VQRQVLQSAN QPPLPQLFTT HGDLSSCLVP PDKMLSSEIN QDPRLSSLLQ QQYLLSQLQL HSQTPAAQLP LLEKFMLLQQ QQKQEQQQHI
0901: LSKVLSGHQS HQQFGDPSYG QAPAVMPAHN SAMDHLVLQR AHEPLKINQQ MPLAYERTGQ LSYQPNLNLQ GTLDVSSVSS GPLHLPHQII DQTAEASDAQ
1001: FSLENDDSVD PATATKPVMA DSSTLSEAME RSVSLTFSEA MEKPEEDSRT SHDCVSSISD QLHDTNISSA TLSQWAWKST PGLKPKSLLE IQQEEQLRAQ
1101: RETSHSEIVA TATSARILSV PWAGLVTNLE SKSSHDTIQA ATSTLLVNSE NTLKSKNSKS QLHDLLAEEV LAKSNKEDIE PLANNAQDSL LQSPSITEAH
1201: VDTSTINDDD FVEAKDTRKG RKKASKSKAS VVKIPQSVVS SELPAAPSPI EKAKSTRQAQ QDKDYLPAPP TGPSLGDFVL WKGDQATSVP PPAWSGDSGK
1301: PQRPMPLRDI QMEQEKRSGT LQQQVPIPTP VKQQPSHISR GSGTSRQLFG SSPSNTASSI QLISQVPAPK SRDEDDLFWG PLDQTKPNPK SSGSWGIKGT
1401: TSKGASGAGS GRKPSGSRPV DQSLSSFSSP SPSVSKEAME FRDWCVNEWI GLTGTNDTSF LEFCIKQSTS EAEMLLRENL GSMDPNHEFI DKFLNYKEFL
1501: PSDVLEIAFQ LQKPHNPSTG SASHRNSNTT AATEADGAEE GLDGPSKGRV KKKGKKGQKV SASILGFNVV SNRIMMGEIQ SIQD
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.