Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G42950.1 | EER91265 | AT4G26630.1 | 25387881 |
| AT5G42950.1 | OQU91413 | AT4G26630.1 | 25387881 |
| AT5G42950.1 | EER96888 | AT5G65410.1 | 16120600 |
| AT5G42950.1 | EES15144 | AT5G65410.1 | 16120600 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034263_P004 | Maize | cytosol | 51.54 | 64.24 |
| EER95850 | Sorghum | cytosol | 34.31 | 25.61 |
| GSMUA_Achr4P28310_001 | Banana | cytosol | 26.99 | 20.96 |
| GSMUA_Achr2P13140_001 | Banana | cytosol | 28.7 | 20.78 |
| Solyc04g080240.2.1 | Tomato | cytosol | 27.8 | 19.77 |
| PGSC0003DMT400013161 | Potato | cytosol | 27.48 | 19.71 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 28.86 | 19.34 |
| Bra027468.1-P | Field mustard | nucleus | 25.45 | 18.71 |
| AT5G42950.1 | Thale cress | cytosol | 25.85 | 18.55 |
| KRH05805 | Soybean | endoplasmic reticulum | 26.18 | 18.06 |
| KRH61182 | Soybean | cytosol | 25.04 | 17.25 |
| KRH15224 | Soybean | endoplasmic reticulum | 25.69 | 16.79 |
| KRH51860 | Soybean | cytosol | 24.39 | 16.72 |
| CDY32971 | Canola | nucleus | 24.55 | 14.72 |
| KXG34019 | Sorghum | cytosol | 16.1 | 12.91 |
| CDY71257 | Canola | cytosol, nucleus | 5.28 | 12.15 |
Protein Annotations
| Gene3D:3.30.1490.40 | MapMan:35.2 | UniProt:C5WZ42 | ncoils:Coil | ProteinID:EER90802.2 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 |
| EnsemblPlants:OQU90902 | ProteinID:OQU90902 | ProteinID:OQU90902.1 | ProteinID:OQU90903.1 | ProteinID:OQU90904.1 | PFAM:PF02213 |
| PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 | SMART:SM00444 | EnsemblPlantsGene:SORBI_3001G071600 | SUPFAM:SSF55277 |
| UniParc:UPI00081AC42A | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:5447289..5455568
Molecular Weight (calculated)
135721.0 Da
IEP (calculated)
6.003
GRAVY (calculated)
-0.788
Length
1230 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAEDDETGD RENADPNRCS TADAPLSPEN TEDKLDLDTK STLSIQLLQP KPGENKEPGS HDIHFNSANT LGNSEERNNT GMKRDVFRPS VFDRISGHRN
0101: EDTRLNSDSH RNQFREMVKG HSDMNKVERH CDGPRQYVDS HLSPKEHWVR PPSNERNYDQ RRDNNCNSRW GPSSKDSENW RERSTESDRK DDAPCEKVFS
0201: HSTGHGKEKD GSNHEKVNER GNISRSWNSS YFASRGAGGT SDHLSLDPQK LSASFRHSSY RQESDNPNSA SSRRRFTSVT SRVNSQSSRP FHLGVRSDRP
0301: GGPSRNSVRY SRIKLFEIYR TTDVRNFVMP IDDIDNDEIS SLWQEEPMDP LALIAPNAEE MVILKGIEKG DITNSLAQAC KDGSDDKSNP DVVALEQTKL
0401: SGREDQTGSS EYFNGEMTIG TRGILGAAHL SEHLKSVKSP PKESESIGDG IHGPCAEFGH QRNVLDQGTK VDEMAGVGEN VNPENLSLYY KDPKGCTQGP
0501: FPGYDIIGWF EAGFFGIDLL VRVASAPCDS PFLLLGDVMP HLRAKVRAPP GFSNTKPRSM TEASHLGSAY LGTSDYGSIN KNGCVTEAEN HSLESPMSSK
0601: TQNPRAETNV VTGGMNECSC STFGNRFVSG DEKVSSVNHL EVQKGLLERE NTFQIDGDVI SVAESQKKDS VQSTSHSTFF QQMVGPSNEA LQPQNINLLS
0701: MLLPTEKGQA PAVNSGFSLW SNNADSGNLQ AVMCGIDLAQ EVLNMRQNLH NSQQIGIESI DVQQHYSLTQ NQPTLGCLNP QITQPEKFLS EISPDPQLLN
0801: NNQQQYLPSE LHLQPLMPGV PQPQYSLLNN MLQPRQQEQQ QQQQQHISQA LPHDCSMQQL YDPSHGTRHT SLSSSDRMKL CLQRTQEILE LAQKLPGHGM
0901: HDLQPPNHAN VKLRDMGIIG LSESWAPALA LPLPHEMMGH AAWKECSASL TQGSAVVGAP SRKESIVDLP SEKTLSSGSN EYSKVTVFEA KDFPQSCQGL
1001: AKSESVASHI SNEVHEMEIS STHPHSWKPT PGVRTKSVLE IQAEEQLERQ REIALEKTKV TTTAASALSI PWGGLAETSG QQFGDETRPM CDKKNVNISK
1101: SKRSQLHDLL AGEELVKSND KDAVIINSAD DTSFPPLAPS VTQSDAHLSS HSTPNSEQGL FWEPCEHAKQ DKLGLQSPPS RARASMVNTR TAALDIQKKG
1201: KKGKKLNTSA LGFKVESTRI MMGEIVHADE
0101: EDTRLNSDSH RNQFREMVKG HSDMNKVERH CDGPRQYVDS HLSPKEHWVR PPSNERNYDQ RRDNNCNSRW GPSSKDSENW RERSTESDRK DDAPCEKVFS
0201: HSTGHGKEKD GSNHEKVNER GNISRSWNSS YFASRGAGGT SDHLSLDPQK LSASFRHSSY RQESDNPNSA SSRRRFTSVT SRVNSQSSRP FHLGVRSDRP
0301: GGPSRNSVRY SRIKLFEIYR TTDVRNFVMP IDDIDNDEIS SLWQEEPMDP LALIAPNAEE MVILKGIEKG DITNSLAQAC KDGSDDKSNP DVVALEQTKL
0401: SGREDQTGSS EYFNGEMTIG TRGILGAAHL SEHLKSVKSP PKESESIGDG IHGPCAEFGH QRNVLDQGTK VDEMAGVGEN VNPENLSLYY KDPKGCTQGP
0501: FPGYDIIGWF EAGFFGIDLL VRVASAPCDS PFLLLGDVMP HLRAKVRAPP GFSNTKPRSM TEASHLGSAY LGTSDYGSIN KNGCVTEAEN HSLESPMSSK
0601: TQNPRAETNV VTGGMNECSC STFGNRFVSG DEKVSSVNHL EVQKGLLERE NTFQIDGDVI SVAESQKKDS VQSTSHSTFF QQMVGPSNEA LQPQNINLLS
0701: MLLPTEKGQA PAVNSGFSLW SNNADSGNLQ AVMCGIDLAQ EVLNMRQNLH NSQQIGIESI DVQQHYSLTQ NQPTLGCLNP QITQPEKFLS EISPDPQLLN
0801: NNQQQYLPSE LHLQPLMPGV PQPQYSLLNN MLQPRQQEQQ QQQQQHISQA LPHDCSMQQL YDPSHGTRHT SLSSSDRMKL CLQRTQEILE LAQKLPGHGM
0901: HDLQPPNHAN VKLRDMGIIG LSESWAPALA LPLPHEMMGH AAWKECSASL TQGSAVVGAP SRKESIVDLP SEKTLSSGSN EYSKVTVFEA KDFPQSCQGL
1001: AKSESVASHI SNEVHEMEIS STHPHSWKPT PGVRTKSVLE IQAEEQLERQ REIALEKTKV TTTAASALSI PWGGLAETSG QQFGDETRPM CDKKNVNISK
1101: SKRSQLHDLL AGEELVKSND KDAVIINSAD DTSFPPLAPS VTQSDAHLSS HSTPNSEQGL FWEPCEHAKQ DKLGLQSPPS RARASMVNTR TAALDIQKKG
1201: KKGKKLNTSA LGFKVESTRI MMGEIVHADE
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.