Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28310_001 | Banana | cytosol | 56.97 | 61.11 |
| EER95850 | Sorghum | cytosol | 36.14 | 37.26 |
| TraesCS2A01G255000.2 | Wheat | nucleus | 37.14 | 37.1 |
| TraesCS2D01G255400.2 | Wheat | nucleus | 37.08 | 37.04 |
| TraesCS2B01G267200.2 | Wheat | nucleus | 37.02 | 36.91 |
| VIT_18s0001g12350.t01 | Wine grape | cytosol | 39.55 | 36.6 |
| PGSC0003DMT400013161 | Potato | cytosol | 35.67 | 35.34 |
| Solyc04g080240.2.1 | Tomato | cytosol | 35.67 | 35.03 |
| KRH05805 | Soybean | endoplasmic reticulum | 36.26 | 34.55 |
| Zm00001d018770_P003 | Maize | cytosol | 34.67 | 34.26 |
| KRH61182 | Soybean | cytosol | 35.84 | 34.1 |
| AT5G42950.1 | Thale cress | cytosol | 33.9 | 33.61 |
| KRH51860 | Soybean | cytosol | 35.26 | 33.39 |
| Os07t0137900-01 | Rice | cytosol | 21.84 | 32.98 |
| Bra027468.1-P | Field mustard | nucleus | 32.2 | 32.7 |
| KRH15224 | Soybean | endoplasmic reticulum | 36.2 | 32.68 |
| OQU90902 | Sorghum | nucleus | 20.78 | 28.7 |
| Zm00001d034263_P004 | Maize | cytosol | 16.6 | 28.57 |
| CDY32971 | Canola | nucleus | 30.96 | 25.63 |
| CDY71257 | Canola | cytosol, nucleus | 7.77 | 24.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.3 | 17.39 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 15.3 | 16.65 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 15.72 | 16.5 |
Protein Annotations
| MapMan:26.10.3.1 | Gene3D:3.30.1490.40 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSMUA_Achr2G13140_001 | EnsemblPlants:GSMUA_Achr2P13140_001 | EnsemblPlants:GSMUA_Achr2T13140_001 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 |
| InterPro:IPR035445 | UniProt:M0S7K5 | PFAM:PF02213 | PFscan:PS50829 | PANTHER:PTHR14445 | PANTHER:PTHR14445:SF36 |
| SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI000296AFD0 | SEG:seg | : | : |
Description
GYF domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13140_001]
Coordinates
chr2:+:15379680..15388686
Molecular Weight (calculated)
185097.0 Da
IEP (calculated)
6.364
GRAVY (calculated)
-0.699
Length
1699 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADLSNADGR RELTVDPSPH QTVKDMQGSD NSIPLSPQWL ISKAVDKVSI MAELGSHHDN RPDAVKALGA GEDLSNTGKR NDVFRPVLHN LEPGRRDRWH
0101: DEERETSSAI RRDRWREGDK EPGDARRIER WSENTFRHSG ETRRIPSERW NDSGNKESDQ RRESKWNTRW GPGDKESDSW REKWSDSGKG GNGTPDKGTP
0201: APYLSGHGKD INNHGKETEG DDHYSRSWRS NYTLGRGRGD SSHHQLQTPV KQPNMIGYGR IRAENGISSA PIGRGRFNSS MSSTNSDASR SLHLGFSHEK
0301: SDGASGDLST IRYTRMKLLD IYRTTDIKSF RLSLDEFVEV PSLTQVEPLE PLAFSAPTSD ESVIIKGIDK GEIVSSGASQ LIKESSIGRT NTDAVSSRQS
0401: KLGSDHDLLN AGLGYKDDTS TILKVIISAL WRVHHMDNNV VLPSADEMIT KEVTRMESSS HYVVPQKSQS AGDHKYGSKF DRKDFSLEVA SVDLISKDVL
0501: IARKLQSPSP EDLSLYYKDP QGQIQGPFAG SDLIGWFEAG YFGIDLQVRL AGSPADAPFS SLGDVMPHLR MKAGPPPGFG VVKHSVTLDE SLKGKIVNPG
0601: SIHSGLGENV LKSGQRNMHD TATESQNRFL ESLMSGNMSG SPSESFSLSR GMQEFGGSTS GRLPSVVGES GNDMNYLFAQ ARLLERQRSL LNPRSYWSEG
0701: DVSSIASKTD IISDSSVPHS KFMPSAGGSP PQILQSPQHV DLLSLLHPGA DKPPSRSVNS GVPFHPNFLE APTVNSPICG GVEFPADMLN MHYNQPMPSQ
0801: IRLGVQQQGL QSANQPPLPH LITQHGDLSS CLVPPEKMLT SEINQDPRLS NLLQQQHLLS QLQLHSQIPA AQLPSLEKIL LLQQQQKQEQ QQLLMLQQQQ
0901: QQQQHMLSKV LSSHQSHQQF GDPSYGQAPA AMSAGNAAVN HLMLQRTHEV LQMNQQRPVA YECSEQPSYY PNVNMQGTLD VNSVSSGSLS MCLPHQVFDQ
1001: MSCSKESDTQ FSLDNDDIPN PTTVEKPVMA ENHKPPSISQ TQAVPPFGSE ALNNLDSVEG GQTSHDFVSS ISDQTKISAD PGKGLPKMVS SQRSSTDIEI
1101: VGTNANEVKS EVQADAEESL FGPSSGTGVE GSVASSTEHS ESLRSQLLSS VNLVTAESKT EGEAESGVVG PLTSNSKVTS SQWAWKSSPG LKPKSLLEIQ
1201: QEEQLRAQKE TLLSEIDAVP TSARSPLPAP WSGLVTNLEN KLNGDTKQAA TSSVVNSENN LKSKSRKSQL HDLLAEEVLT KSSKEDTELF VSRAEGLLLP
1301: SPTPAGSDID TSAVDDDDFV EAKDTRKARK KASKSKASGV KIPQSVGMAE LSADPSPTEK AKGTCQVQQE KELLPALPKG PSLGDFVLWK GDQVSSAPPP
1401: AWSLDSRKLH RPMSLRDIQM EQEKRSGTVQ QQISIPTPAK LQSNHASRGN GSSRQDSGSF PSNTASSIHL VSQVSTQTKS RSEDDLFWGP SEQSKPEPKK
1501: QLVKGTPSKG ASGAGSGQKP SGNRPVDHSL SASPGPVVSV SKGRSVATTK NSEAVEFRDW CVNEWIRLTG TSDTSFLEFC VKQSTSEAEV LLRENLGSLD
1601: RNHEFIDNFL NYKEFLAPDV LEIAFQPQKS RNTSVHNTSL RSSNTATDAE EGLEDGLDGP SKGRGKKKGK KGQKMNPSIL GFNVVSNRIM KGEIQSIDD
0101: DEERETSSAI RRDRWREGDK EPGDARRIER WSENTFRHSG ETRRIPSERW NDSGNKESDQ RRESKWNTRW GPGDKESDSW REKWSDSGKG GNGTPDKGTP
0201: APYLSGHGKD INNHGKETEG DDHYSRSWRS NYTLGRGRGD SSHHQLQTPV KQPNMIGYGR IRAENGISSA PIGRGRFNSS MSSTNSDASR SLHLGFSHEK
0301: SDGASGDLST IRYTRMKLLD IYRTTDIKSF RLSLDEFVEV PSLTQVEPLE PLAFSAPTSD ESVIIKGIDK GEIVSSGASQ LIKESSIGRT NTDAVSSRQS
0401: KLGSDHDLLN AGLGYKDDTS TILKVIISAL WRVHHMDNNV VLPSADEMIT KEVTRMESSS HYVVPQKSQS AGDHKYGSKF DRKDFSLEVA SVDLISKDVL
0501: IARKLQSPSP EDLSLYYKDP QGQIQGPFAG SDLIGWFEAG YFGIDLQVRL AGSPADAPFS SLGDVMPHLR MKAGPPPGFG VVKHSVTLDE SLKGKIVNPG
0601: SIHSGLGENV LKSGQRNMHD TATESQNRFL ESLMSGNMSG SPSESFSLSR GMQEFGGSTS GRLPSVVGES GNDMNYLFAQ ARLLERQRSL LNPRSYWSEG
0701: DVSSIASKTD IISDSSVPHS KFMPSAGGSP PQILQSPQHV DLLSLLHPGA DKPPSRSVNS GVPFHPNFLE APTVNSPICG GVEFPADMLN MHYNQPMPSQ
0801: IRLGVQQQGL QSANQPPLPH LITQHGDLSS CLVPPEKMLT SEINQDPRLS NLLQQQHLLS QLQLHSQIPA AQLPSLEKIL LLQQQQKQEQ QQLLMLQQQQ
0901: QQQQHMLSKV LSSHQSHQQF GDPSYGQAPA AMSAGNAAVN HLMLQRTHEV LQMNQQRPVA YECSEQPSYY PNVNMQGTLD VNSVSSGSLS MCLPHQVFDQ
1001: MSCSKESDTQ FSLDNDDIPN PTTVEKPVMA ENHKPPSISQ TQAVPPFGSE ALNNLDSVEG GQTSHDFVSS ISDQTKISAD PGKGLPKMVS SQRSSTDIEI
1101: VGTNANEVKS EVQADAEESL FGPSSGTGVE GSVASSTEHS ESLRSQLLSS VNLVTAESKT EGEAESGVVG PLTSNSKVTS SQWAWKSSPG LKPKSLLEIQ
1201: QEEQLRAQKE TLLSEIDAVP TSARSPLPAP WSGLVTNLEN KLNGDTKQAA TSSVVNSENN LKSKSRKSQL HDLLAEEVLT KSSKEDTELF VSRAEGLLLP
1301: SPTPAGSDID TSAVDDDDFV EAKDTRKARK KASKSKASGV KIPQSVGMAE LSADPSPTEK AKGTCQVQQE KELLPALPKG PSLGDFVLWK GDQVSSAPPP
1401: AWSLDSRKLH RPMSLRDIQM EQEKRSGTVQ QQISIPTPAK LQSNHASRGN GSSRQDSGSF PSNTASSIHL VSQVSTQTKS RSEDDLFWGP SEQSKPEPKK
1501: QLVKGTPSKG ASGAGSGQKP SGNRPVDHSL SASPGPVVSV SKGRSVATTK NSEAVEFRDW CVNEWIRLTG TSDTSFLEFC VKQSTSEAEV LLRENLGSLD
1601: RNHEFIDNFL NYKEFLAPDV LEIAFQPQKS RNTSVHNTSL RSSNTATDAE EGLEDGLDGP SKGRGKKKGK KGQKMNPSIL GFNVVSNRIM KGEIQSIDD
0001: MANSSAGSAA DHRNKHLSVN PPHQIFKDIQ GSDNAIPLSP QWLLSKPGEN KTGMGTGDPN QYGNHSDVVR TTGNGEETLD NLKKKDVFRP SLLDAESGRR
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
0101: DRWRDEERDT LSSVRNDRWR NGDKDSGDNK KVDRWDNVAP KFGEQRRGPN DRWTDSGNKD AAPEQRRESK WNSRWGPDDK EAEIPRNKWD EPGKDGEIIR
0201: EKGPSLPTSD GDHYRPWRPS QGRGRGEALH NQSTPNKQVT SFSHSRGRGE NTAIFSAGRG RMSPGGSIFT SAPNQSHPPG SASDKGESGP GEPPHLRYSR
0301: MKLLDVYRMA DTECYEKFPD GFIEVPSLTS EEPTDPLALC APSSDEVNVL DAIEKGKIVS SGAPQTSKDG PTGRNPVEFS QPRRIRPAGS REDMTFGAEE
0401: SKDESGETRN YPDDKFRPEA SHEGYAPFRR GNEAPVRELK EPSMQGNAHV QSASPWRQSS GGERSNRNSH DWNDPSADSR LKSSDSVWSH PKDSINHLGG
0501: NNMMLPQSKG ESRWQISEDP SLRRQPSLVF DREQEVRKLL PSSPEELSLY YKDPQGLIQG PFSGSDIIGW FEAGYFGIDL LVRLASAPND SPFSLLGDVM
0601: PHLRAKSGPP PGFTGAKQNE FVDAAGTSAF PGVGKVHSGM GETDMLQNDM RYKHVAGTVA ENRFIESLMS GGLTNSAQGV QGYGVNSSGG LSLPVTDGGA
0701: DMYLLAKKLE LERQRSIPSP YSYWPGRESA NLMPGSENVS ENAQQPTRSP SSDLLSILQG VTDRSSPAVS GPLPAWSQPI QKESDLHHAK TFQTQIPFGV
0801: QQQRLPEQNL PLSGLLGQPM ENNPGGMLSP DMMLAAGLSQ EHQSLNLLQQ QQLLLQLNAQ TPLSAQHQRL LVEKMLLLKH QHKQEEQQQL LRQQQQLYSQ
0901: VFADQQRSQQ RFGDPSYGQL QASLDALRLQ PSKDMSQVNQ QVQVPVSHEE RGINLADLLP VTHATNQTVA SFETPSLHLQ NQLFGNVDPR MVLPDQIDDT
1001: HKKESKSEYE RTVSADYVNS LYSEKPVLSP GYHATHNVEE PVSYPNNESS TATMTAPEIV ESKLLEEQSK DMYAGKGEVS IELSGETPAT EVKNNDVSVA
1101: RKTSEKKSRK QRAKQAADLA KSTSRAPLQE TKKPQPGSAD DSEIKGKTKK SADTLIDNDT HLIKSSTATA SNTSQMSSEV DSVRGEESSL QNTRTQPGRA
1201: WKPAPGFKPK SLLEIQMEEQ RVAQAEALAP KISSTVNSVG SAAPWAGIVT NSDSNILRET HGESAITQTG VVKPESVPTL KAKKSHLHDL LADDVFAKSS
1301: DKEREVMEII SNNDAFMQVT TTNAESFDDD NFIDARETKK SRKKSARAKT SGAKIAAHVP AVDTSLQTNS VEKGKSSRIL QQQEKEVLPA IPSGPSLGDF
1401: VLWKGESVNN PPPAAAWSSG PKKSTKPSSL RDIVKEQEKM TTSSHPPPSP VPTTQKAIPP QAHQGGASWS RSASSPSQAV SQSSSQSKSK GDDDLFWGPV
1501: EQSTQDTKQG DFPHLTSQNS WGTKNTPGKV NAGTSLNRQK SVSMGSADRV LSSPVVTQAS HKGKKEAVTK LTEANGFRDW CKSECLRLLG SEDTSVLEFC
1601: LKLSRSEAET LLIENLGSRD PDHKFIDKFL NYKDLLPSEV VEIAFQSKGS GVGTRNNTGE DYYYNTTAAN DGFSKVGGKK KAKKGKKVSL SASVLGFNVV
1701: SNRIMMGEIQ TIED
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMM3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.