Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g015930.2.1 | Tomato | cytosol | 91.84 | 91.84 |
| PGSC0003DMT400006082 | Potato | cytosol | 36.4 | 76.99 |
| VIT_01s0146g00140.t01 | Wine grape | nucleus | 23.64 | 38.58 |
| CDY66147 | Canola | nucleus | 4.15 | 37.87 |
| AT1G27430.1 | Thale cress | cytosol | 34.39 | 35.59 |
| AT1G24300.1 | Thale cress | cytosol | 34.2 | 35.32 |
| KRH06906 | Soybean | cytosol | 34.72 | 33.17 |
| KRG94582 | Soybean | cytosol | 34.13 | 32.61 |
| CDY66146 | Canola | cytosol | 15.16 | 32.28 |
| CDY11817 | Canola | cytosol | 23.58 | 31.87 |
| CDY11819 | Canola | cytosol | 23.38 | 31.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.48 | 30.51 |
| Bra010950.1-P | Field mustard | cytosol | 24.94 | 30.41 |
| GSMUA_Achr7P02660_001 | Banana | cytosol | 30.7 | 30.35 |
| KXG34019 | Sorghum | cytosol | 29.86 | 30.05 |
| TraesCS3D01G428900.1 | Wheat | cytosol | 29.27 | 30.01 |
| Zm00001d011983_P003 | Maize | cytosol | 29.79 | 29.95 |
| Zm00001d011981_P007 | Maize | cytosol | 29.99 | 29.93 |
| GSMUA_Achr4P15970_001 | Banana | cytosol | 31.22 | 29.79 |
| TraesCS3B01G470800.2 | Wheat | cytosol | 29.53 | 29.51 |
| Bra010951.1-P | Field mustard | cytosol | 20.14 | 29.37 |
| TraesCS3A01G436500.1 | Wheat | endoplasmic reticulum, plasma membrane | 29.02 | 29.11 |
| HORVU3Hr1G095420.3 | Barley | cytosol, nucleus | 29.21 | 29.1 |
| Os01t0924600-01 | Rice | plasma membrane | 8.23 | 27.85 |
| PGSC0003DMT400013161 | Potato | cytosol | 17.23 | 15.51 |
Protein Annotations
| EntrezGene:102596709 | Gene3D:3.30.1490.40 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GYF | InterPro:GYF-like_dom_sf | InterPro:IPR003169 | InterPro:IPR035445 | UniProt:M1AQJ9 |
| PFAM:PF02213 | EnsemblPlantsGene:PGSC0003DMG400010805 | PGSC:PGSC0003DMG400010805 | EnsemblPlants:PGSC0003DMT400028024 | PFscan:PS50829 | PANTHER:PTHR14445 |
| PANTHER:PTHR14445:SF41 | SMART:SM00444 | SUPFAM:SSF55277 | UniParc:UPI0002966E1B | RefSeq:XP_006360911.1 | SEG:seg |
Description
GYF domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010805]
Coordinates
chr5:-:15796564..15805718
Molecular Weight (calculated)
171393.0 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.819
Length
1544 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEGNLDLPD DLLSSKTSDQ SKGNDDNKPF MGQLDISKDQ AMVDSSIPLS PQWLYVKPSD TKMEPRPPSS LSLGSSVDSS QKEAWRTDVP DDKKDWRRTT
0101: VETESSRRWR EEERETGLLG RRERRKTDRR AEHDVNNRNS GLDTRRDIKW SSRWGPDDKE KENRSEKRID VDKEDVHNDG QTFVANRTVS ERESDSRDKW
0201: RPRYKMEGNS AAPSSYRAAP GFGQERGKVE GSNVGFNLGR GRSTGTIIRP SSGGAIGASP FENSVAGKSR ISTGIFSYPR GKTLDIYRRQ KLGSSLCSMP
0301: ENMEEAPPVT QVIAIEPLAF VVPDAEEEAV LNDIWKGKIT GGGVSHNSFR KGQSMDNVTE TGDTEPNNTK MGAPFADVTE ETVDRLLKTS IGVEEANTYS
0401: FVYENGVKVK FDGGDNHVGL KDNVSEAIAA DGSLFTRKRT DNSDCLNYIS GSQSDISVQS LPDSGVTRTP IFENNQHVAF DGSLKVSDDS NSVFVKSSSE
0501: IYWNNLLGRG IPPEELSLYY RDPQGEIQGP FLGADIISWF DQGFFGMDLL VRLEDAPEDS PFFELCDVMP HLKFEHEHDG NTNLSQAEPS AVLEGKLDSG
0601: LRSSASVSEM VGSAAFDGSS WPPSDFDGLG GHRIQSIPDH PARQFKPPYS HSEDFNNFVA QDEEIVFPGR PGSSGNAIGK TSTGLTDPSN IHRATPSAMC
0701: EGGVPNHEQT LHPLGLLWSE LEGTAGKSGP ISDVPFRGSG QDQVLNSGAA RVGPFGAKTD STSALETWTD AYRRNAGSEP NIYQDAMDAS RLLHQDHELN
0801: RFELADKLFS QQLQQQHPHN LISSHNSHLN EAMMERGTNH NSIHQPQLAS QTGQDLEHFM ALQLQQQRQL QLQQLQQQQQ FHQQQMLMKE QESHARQLVL
0901: EQLLQRQVRE PSYTQSRLDA IRHSSALEQV LIEQQILSEL QQRPHLPPRH AEPSIEHLIQ AKFGQIPHQG PQSDLMELLS RAKHGQLHPL EHQALQQEQA
1001: HERLRQRLEM EEDRQIGAVW PADETGQYLR NPGVARRANS GFGPLDIYQQ QQIPPPEEHV SHLERNLSMQ DRLQRGLYDT GFLPLERTMS VPGGGPGVNL
1101: DAINPLVRAQ GLEMQDPNSR MHSAGHMPGF STGIHLQSPH RPLFSNQFHA PNGDTMENHW SERNGQLPAD WMETRMQQLH LNGERQRRDF DVKRASEDQS
1201: MWMSAGANDD SSKRLLMELL QQKSGQQSTD QAEMTRGILF ERGFHSGHFS TTNASNRSFN PLLDQDMSLN QAITVGSYGS NSGFPPQRDH VNEIADSLDA
1301: CERFPFKSHS GALAEAQPVF SSINEASQVH LEARESIVRQ AGVPTVEGEM PINLLSRHTS LGTGGGSLDF YNDKSNRRDS ATEEIPKERM AVTSKRSDNI
1401: LPKHPPVLRV SSTQEGLSEI TSDSLVRGKN PSDAMASEGG KREAGGNAAN QVPSAMTSEK KDGRFRRTAS CSDADVSETS FSDMLKSNAK KPTAQEAHAS
1501: EAIDATHRSG KKKGKKGRQI DPALLGFKVT SNRIMMGEIQ RIED
0101: VETESSRRWR EEERETGLLG RRERRKTDRR AEHDVNNRNS GLDTRRDIKW SSRWGPDDKE KENRSEKRID VDKEDVHNDG QTFVANRTVS ERESDSRDKW
0201: RPRYKMEGNS AAPSSYRAAP GFGQERGKVE GSNVGFNLGR GRSTGTIIRP SSGGAIGASP FENSVAGKSR ISTGIFSYPR GKTLDIYRRQ KLGSSLCSMP
0301: ENMEEAPPVT QVIAIEPLAF VVPDAEEEAV LNDIWKGKIT GGGVSHNSFR KGQSMDNVTE TGDTEPNNTK MGAPFADVTE ETVDRLLKTS IGVEEANTYS
0401: FVYENGVKVK FDGGDNHVGL KDNVSEAIAA DGSLFTRKRT DNSDCLNYIS GSQSDISVQS LPDSGVTRTP IFENNQHVAF DGSLKVSDDS NSVFVKSSSE
0501: IYWNNLLGRG IPPEELSLYY RDPQGEIQGP FLGADIISWF DQGFFGMDLL VRLEDAPEDS PFFELCDVMP HLKFEHEHDG NTNLSQAEPS AVLEGKLDSG
0601: LRSSASVSEM VGSAAFDGSS WPPSDFDGLG GHRIQSIPDH PARQFKPPYS HSEDFNNFVA QDEEIVFPGR PGSSGNAIGK TSTGLTDPSN IHRATPSAMC
0701: EGGVPNHEQT LHPLGLLWSE LEGTAGKSGP ISDVPFRGSG QDQVLNSGAA RVGPFGAKTD STSALETWTD AYRRNAGSEP NIYQDAMDAS RLLHQDHELN
0801: RFELADKLFS QQLQQQHPHN LISSHNSHLN EAMMERGTNH NSIHQPQLAS QTGQDLEHFM ALQLQQQRQL QLQQLQQQQQ FHQQQMLMKE QESHARQLVL
0901: EQLLQRQVRE PSYTQSRLDA IRHSSALEQV LIEQQILSEL QQRPHLPPRH AEPSIEHLIQ AKFGQIPHQG PQSDLMELLS RAKHGQLHPL EHQALQQEQA
1001: HERLRQRLEM EEDRQIGAVW PADETGQYLR NPGVARRANS GFGPLDIYQQ QQIPPPEEHV SHLERNLSMQ DRLQRGLYDT GFLPLERTMS VPGGGPGVNL
1101: DAINPLVRAQ GLEMQDPNSR MHSAGHMPGF STGIHLQSPH RPLFSNQFHA PNGDTMENHW SERNGQLPAD WMETRMQQLH LNGERQRRDF DVKRASEDQS
1201: MWMSAGANDD SSKRLLMELL QQKSGQQSTD QAEMTRGILF ERGFHSGHFS TTNASNRSFN PLLDQDMSLN QAITVGSYGS NSGFPPQRDH VNEIADSLDA
1301: CERFPFKSHS GALAEAQPVF SSINEASQVH LEARESIVRQ AGVPTVEGEM PINLLSRHTS LGTGGGSLDF YNDKSNRRDS ATEEIPKERM AVTSKRSDNI
1401: LPKHPPVLRV SSTQEGLSEI TSDSLVRGKN PSDAMASEGG KREAGGNAAN QVPSAMTSEK KDGRFRRTAS CSDADVSETS FSDMLKSNAK KPTAQEAHAS
1501: EAIDATHRSG KKKGKKGRQI DPALLGFKVT SNRIMMGEIQ RIED
0001: MAEGKFDLPD DLIFSKSSDQ LKELASDNSI PLSPQWLYTK SSEYKMDVRS PTPVPMGNPS DPNPKDAWRL DAPEDKKDWK KIVHENETSR RWREEERETG
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
0101: LLGARKVDRR KTERRIDSVS SRETGDIKNA AASDRWNDVN SRAAVHEPRR DNKWSSRWGP DDKEKEARCE KVDINKDKEE PQSESQSVVS NVRATSERDS
0201: DTRDKWRPRH RMESQSGGPS SYRAAPGFGL DRGRAEGPNL GFTVGRGRAS TIGRGSSTSL IGAGSALSPV FRYPRGKLLD MYRKQKPDSS LGRILTEMDE
0301: VASITQVALI EPLAFIAPDA EEEANLNGIW KGRIISSEVY TSSGEESLGG NSLLKCRIPE SGETKVDGAL LGFMNGDNGS MKNNDSGLLG SHNGGLGAAS
0401: SVPRLNSVAS ESYGSGGAGY QLSHGSPEAV RSVFTKSSVL DGSESVVGSF EQAYTGKLQQ PDTEVDHSEG AMPPEEFLFL YIDPQGVIQG PFIGSDIISW
0501: FEQGFFGTDL QVRLASAPEG TPFQDLGRVM SYIKAESVHA HISDQKSELE ETSLKANSEA GGSVAHVAES NDSSSLTGIS RSFSVYNNPS GQDNFQRKSE
0601: SEVYGRPPHA EDQSFLDFSA QDEEIVFPGR ARVSGYASSV KSSTSMHDAL MEFSGHSDIP VEVTTAATRN QNENKLHPFG VLWSELEGGS TPVNPLPNRS
0701: SGAMGEPSCS IENRPINSRR NSQIDPNISL DALSGNRMSQ FEHESNFFNH GDQLPSNQHH QQHFQNRDML SHLHIGDQDL EHLITLQLQQ QQKIQMQQQQ
0801: KIQLQQQQKI QLQQHQLEQE HQLHQKLLQE QQQSHARQLH FQQILQGQTP DTRFGQSHDF PRSNSVDQML LEQQMLNELQ KSSGHPSQNF APYIEQHAAG
0901: NFGRFTHEGH QRELLEQLFS TQMQSQYGQK QSQYGQMQSQ HGQLQSEPIR SLEYQLLQQE QLMQLANGVR HNTLLEEQRH IDPLWPSDHS DQLLRTHPGI
1001: HRSHSSAGFR PLDFHQQQQR PHFEDQFSQL ERNRSYQQQL RLELLEHGLP FERSASGLNL DAVNGLGLSQ GLELRDATAH MQSSGRLGNS TPGFSHQNPR
1101: IPLGESHFSH LEPTEGRWSG ADTQLAGDWA ESQFRRSNMD TEHDKMRSEI RRLGEDPNSW MVGGSTDDKS KQLFMELLHQ RPGHQSAESP NMNRGYPYDR
1201: MVPSGLTPGI QTLGGLSDHG GNQNVSSAFG DRSFSDEQVN RVPGYGNNMG SLHHNSSLLS GIIDAGRSTQ NETQAFSNMF GMNKDANDIN TWNNVPPKNE
1301: GMGRMMSYDA QDRMGKQAVL DSLIQEELPV GTPGQQSSFN ISDRYSDNLV GEDRRKDRLV VPSHGQNSVL LKRPPSSHSS SSHEGLLERM SDTASRAAAS
1401: SYSGIEGGVR RESGAAGNKG STSEAASFSE MLKKSNSMKK VAAESTDATE GSKGGGGKKK GKKGRQIDPA LLGFKVTSNR ILMGEIHRAD DF
Arabidopsis Description
GYF domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HSW8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.