Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g043090.1.1 | Tomato | nucleus | 95.45 | 95.2 |
| VIT_09s0002g04700.t01 | Wine grape | nucleus | 68.98 | 61.14 |
| KRH23479 | Soybean | nucleus | 55.88 | 54.43 |
| KRH09846 | Soybean | nucleus | 54.28 | 51.13 |
| PGSC0003DMT400070593 | Potato | nucleus | 42.25 | 44.89 |
| GSMUA_Achr8P04010_001 | Banana | nucleus | 37.43 | 40.11 |
| GSMUA_Achr8P26150_001 | Banana | nucleus | 35.56 | 38.0 |
| Os01t0718900-01 | Rice | nucleus | 31.28 | 36.34 |
| TraesCS3B01G274700.1 | Wheat | nucleus, plastid | 27.54 | 33.01 |
| TraesCS3A01G245400.1 | Wheat | nucleus, plastid | 27.54 | 32.8 |
| TraesCS3D01G246100.1 | Wheat | nucleus, plastid | 27.27 | 32.28 |
| PGSC0003DMT400077199 | Potato | cytosol | 22.73 | 31.14 |
| OQU87430 | Sorghum | nucleus, plastid | 28.61 | 30.48 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 26.47 | 28.29 |
| PGSC0003DMT400026432 | Potato | cytosol | 20.05 | 25.95 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 23.26 | 23.32 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 22.46 | 21.16 |
| PGSC0003DMT400020194 | Potato | plastid | 21.39 | 20.89 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400080593 | EnsemblPlantsGene:PGSC0003DMG400031382 | EntrezGene:102602483 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF6 | PFAM:PF13837 | PFscan:PS50090 |
| PGSC:PGSC0003DMG400031382 | RefSeq:XP_006346580.1 | SEG:seg | UniParc:UPI000295B0F9 | UniProt:M1D3Q3 | MapMan:15.5.20 |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400031382]
Coordinates
chr12:+:50360313..50363785
Molecular Weight (calculated)
43013.3 Da
IEP (calculated)
4.640
GRAVY (calculated)
-1.244
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDIEDNGRY PPNPYGMNQG YESSNRQKLP VHDTSYSRHV DNQYVEEADD DEEVDDEEVD GEEEEEDDDG EENGVQRIGK DVFDDDDDDD DEYGDSQRHQ
101: KKRKLKSLLS SYEFAPRVPP PSTTAATAPK PSFGGRNPLS DWSEHETFIL LDAWGTRFVR HGRKSLRSEE WQEVAERVSR GSKLERTDTQ CRNRLDTLKK
201: KYKKEKMKFA ETSSTTSKWV YFKKMDMLLT STPQKTGVSC GMDSGEYVFM SPKTYLNRAN GLDEMRDSPA NSESADGSED LPPKRSRNVQ PGGNGNGHSF
301: KLIADSIHKF SEIYVKIENS KRQQMMELEK MRMDFHRELE LQKRQIMERA QAEIARIRQG NDEENDLSAE NVSG
101: KKRKLKSLLS SYEFAPRVPP PSTTAATAPK PSFGGRNPLS DWSEHETFIL LDAWGTRFVR HGRKSLRSEE WQEVAERVSR GSKLERTDTQ CRNRLDTLKK
201: KYKKEKMKFA ETSSTTSKWV YFKKMDMLLT STPQKTGVSC GMDSGEYVFM SPKTYLNRAN GLDEMRDSPA NSESADGSED LPPKRSRNVQ PGGNGNGHSF
301: KLIADSIHKF SEIYVKIENS KRQQMMELEK MRMDFHRELE LQKRQIMERA QAEIARIRQG NDEENDLSAE NVSG
001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.