Factsheet for AT3G24490.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94808	Canola	nucleus	77.78	80.69
CDX93016	Canola	nucleus	47.75	80.3
Bra001951.1-P	Field mustard	nucleus	79.58	78.17
KRH48419	Soybean	nucleus	49.85	46.11
PGSC0003DMT400070593	Potato	nucleus	46.85	44.32
Solyc05g018350.2.1	Tomato	nucleus	46.25	43.63
KRH39263	Soybean	nucleus	51.05	42.82
VIT_11s0016g04130.t01	Wine grape	nucleus	45.65	41.53
GSMUA_Achr8P04010_001	Banana	nucleus	34.23	32.66
Os01t0718900-01	Rice	nucleus	29.13	30.12
GSMUA_Achr8P26150_001	Banana	nucleus	31.23	29.71
TraesCS3B01G274700.1	Wheat	nucleus, plastid	27.33	29.17
TraesCS3A01G245400.1	Wheat	nucleus, plastid	27.33	28.98
TraesCS3D01G246100.1	Wheat	nucleus, plastid	26.43	27.85
AT3G11100.1	Thale cress	nucleus	19.82	26.51
OQU87430	Sorghum	nucleus, plastid	25.83	24.5
AT5G05550.2	Thale cress	nucleus	18.02	24.1
Zm00001d011730_P001	Maize	nucleus, plastid	23.72	22.57
AT3G58630.1	Thale cress	nucleus	20.42	21.18
AT1G54060.1	Thale cress	nucleus	22.22	19.32
AT3G14180.1	Thale cress	nucleus	23.12	17.38

Protein Annotations

MapMan:15.5.20	EntrezGene:822039	ProteinID:AEE76903.1	ArrayExpress:AT3G24490	EnsemblPlantsGene:AT3G24490	RefSeq:AT3G24490
TAIR:AT3G24490	RefSeq:AT3G24490-TAIR-G	EnsemblPlants:AT3G24490.1	TAIR:AT3G24490.1	ProteinID:BAB01995.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	RefSeq:NP_189092.1	PFAM:PF13837	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31307	PANTHER:PTHR31307:SF8	UniProt:Q9LV59
UniParc:UPI00000A98D4	SEG:seg	:	:	:	:

Description

Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]

Coordinates

chr3:+:8910422..8912223

Molecular Weight (calculated)

39085.0 Da

IEP (calculated)

4.370

GRAVY (calculated)

-1.257

Length

333 amino acids

Sequence
(BLAST)

001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.