Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P29360_001 | Banana | plastid | 84.27 | 86.71 |
| VIT_19s0177g00340.t01 | Wine grape | plastid | 71.35 | 73.84 |
| Bra035772.1-P | Field mustard | plastid | 70.22 | 70.62 |
| CDY19631 | Canola | plastid | 70.22 | 70.62 |
| CDY29435 | Canola | plastid | 70.22 | 70.22 |
| Solyc10g006370.2.1 | Tomato | plastid | 66.85 | 69.19 |
| PGSC0003DMT400037299 | Potato | plastid | 66.29 | 68.6 |
| KRH46109 | Soybean | plastid | 69.66 | 68.51 |
| KRG98845 | Soybean | plastid | 67.98 | 68.36 |
| CDY25188 | Canola | plastid | 66.85 | 67.61 |
| Bra018876.1-P | Field mustard | plastid | 66.85 | 67.61 |
| CDY07336 | Canola | plastid | 62.36 | 66.87 |
| CDY25178 | Canola | plastid | 66.29 | 66.67 |
| CDY29612 | Canola | plastid | 65.17 | 65.91 |
| Bra030468.1-P | Field mustard | plastid | 65.17 | 65.91 |
| Os07t0520800-01 | Rice | plasma membrane, plastid | 60.67 | 65.45 |
| AT1G50900.1 | Thale cress | plastid | 63.48 | 64.57 |
| EER97310 | Sorghum | plastid | 65.73 | 63.59 |
| TraesCS2A01G221000.1 | Wheat | plastid | 61.8 | 62.5 |
| TraesCS2B01G246600.1 | Wheat | plastid | 61.8 | 62.5 |
| TraesCS2D01G226700.1 | Wheat | plastid | 61.8 | 62.5 |
| GSMUA_Achr9P30190_001 | Banana | plastid | 62.36 | 62.01 |
| Zm00001d021645_P001 | Maize | plastid | 64.61 | 61.83 |
| VIT_19s0177g00330.t01 | Wine grape | cytosol | 32.58 | 61.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P11670_001 | EnsemblPlants:GSMUA_Achr9T11670_001 | EnsemblPlantsGene:GSMUA_Achr9G11670_001 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| InterPro:IPR020683 | InterPro:IPR036770 | PFscan:PS50297 | SEG:seg | SUPFAM:SSF48403 | UniParc:UPI000295B741 |
| UniProt:M0TZH6 | MapMan:23.1.7.1 | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G11670_001]
Coordinates
chr9:+:7579406..7581302
Molecular Weight (calculated)
19794.3 Da
IEP (calculated)
4.874
GRAVY (calculated)
-0.346
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIPCTLYY QIPSFSSSSA SSSSVRLSSP FVALTRRLGW FRASEMRSKL GPETNGSRFT CWFRFGNRGV DAEGAGIYGS QTRDDFDRDD VEQYFNYMGM
101: LAVEGSYDKM EALLSQNIHP VDILLMLAAS EGDKPKIEEL MRAGAKYDVK DADGRTALDR AANEEIKELI LGFSVQRA
101: LAVEGSYDKM EALLSQNIHP VDILLMLAAS EGDKPKIEEL MRAGAKYDVK DADGRTALDR AANEEIKELI LGFSVQRA
001: MASSSISFSC APSLATSLFS TTSSSPRLLS SRFLGTRNLK LRIRPARLGP SNGSRTTCWF KFGKNGVDAE NAGIYGSQSR DDFDRDDVEQ YFNYMGMLAV
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
Arabidopsis Description
LTDProtein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.