Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98845 | Soybean | plastid | 92.27 | 94.35 |
| VIT_19s0177g00340.t01 | Wine grape | plastid | 70.17 | 73.84 |
| GSMUA_Achr6P29360_001 | Banana | plastid | 66.85 | 69.94 |
| GSMUA_Achr9P11670_001 | Banana | plastid | 68.51 | 69.66 |
| CDY29435 | Canola | plastid | 67.96 | 69.1 |
| Bra035772.1-P | Field mustard | plastid | 67.4 | 68.93 |
| CDY19631 | Canola | plastid | 67.4 | 68.93 |
| Bra018876.1-P | Field mustard | plastid | 65.19 | 67.05 |
| CDY29612 | Canola | plastid | 65.19 | 67.05 |
| CDY25188 | Canola | plastid | 65.19 | 67.05 |
| Bra030468.1-P | Field mustard | plastid | 65.19 | 67.05 |
| CDY07336 | Canola | plastid | 61.33 | 66.87 |
| CDY25178 | Canola | plastid | 64.64 | 66.1 |
| PGSC0003DMT400037299 | Potato | plastid | 62.43 | 65.7 |
| Solyc10g006370.2.1 | Tomato | plastid | 62.43 | 65.7 |
| AT1G50900.1 | Thale cress | plastid | 62.98 | 65.14 |
| Os07t0520800-01 | Rice | plasma membrane, plastid | 57.46 | 63.03 |
| VIT_19s0177g00330.t01 | Wine grape | cytosol | 32.6 | 62.11 |
| TraesCS2A01G221000.1 | Wheat | plastid | 58.56 | 60.23 |
| TraesCS2D01G226700.1 | Wheat | plastid | 58.56 | 60.23 |
| TraesCS2B01G246600.1 | Wheat | plastid | 58.01 | 59.66 |
| EER97310 | Sorghum | plastid | 60.22 | 59.24 |
| Zm00001d021645_P001 | Maize | plastid | 60.22 | 58.6 |
| GSMUA_Achr9P30190_001 | Banana | plastid | 55.8 | 56.42 |
Protein Annotations
| EMBL:ACUP02005320 | EnsemblPlants:KRH46109 | EnsemblPlantsGene:GLYMA_08G312800 | Gene3D:1.25.40.20 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009536 | GO:GO:0009570 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| InterPro:IPR020683 | InterPro:IPR036770 | PFscan:PS50297 | ProteinID:KRH46109 | ProteinID:KRH46109.1 | SEG:seg |
| SUPFAM:SSF48403 | UniParc:UPI00023BCA89 | UniProt:I1JFS5 | MapMan:23.1.7.1 | : | : |
Description
hypothetical protein
Coordinates
chr8:-:43261650..43265244
Molecular Weight (calculated)
19879.3 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.456
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIPCITHH HHPITSNPNN NNAFPSPHVS ASNLASRFLG TRRRVGSHSL TSRIIGPSNG SKSTCWFRFG KNGVDAQGAG IYGSQGRDDF DRDDVEQYFN
101: YMGMLAVEGT YDKMEALLSQ NIHPVDILLL LAASEGDKPK IEELLRAGAK YDVKDADGRT ALDRAADEIK DFILNFSVQR A
101: YMGMLAVEGT YDKMEALLSQ NIHPVDILLL LAASEGDKPK IEELLRAGAK YDVKDADGRT ALDRAADEIK DFILNFSVQR A
001: MASSSISFSC APSLATSLFS TTSSSPRLLS SRFLGTRNLK LRIRPARLGP SNGSRTTCWF KFGKNGVDAE NAGIYGSQSR DDFDRDDVEQ YFNYMGMLAV
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
Arabidopsis Description
LTDProtein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.