Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19631 | Canola | plastid | 97.75 | 98.31 |
| CDY07336 | Canola | plastid | 74.72 | 80.12 |
| CDY25188 | Canola | plastid | 79.21 | 80.11 |
| CDY29612 | Canola | plastid | 79.21 | 80.11 |
| CDY25178 | Canola | plastid | 78.09 | 78.53 |
| VIT_19s0177g00340.t01 | Wine grape | plastid | 68.54 | 70.93 |
| GSMUA_Achr9P11670_001 | Banana | plastid | 70.22 | 70.22 |
| KRG98845 | Soybean | plastid | 69.66 | 70.06 |
| KRH46109 | Soybean | plastid | 69.1 | 67.96 |
| GSMUA_Achr6P29360_001 | Banana | plastid | 65.73 | 67.63 |
| Solyc10g006370.2.1 | Tomato | plastid | 65.17 | 67.44 |
| PGSC0003DMT400037299 | Potato | plastid | 64.61 | 66.86 |
| VIT_19s0177g00330.t01 | Wine grape | cytosol | 33.15 | 62.11 |
| Os07t0520800-01 | Rice | plasma membrane, plastid | 57.3 | 61.82 |
| TraesCS2D01G226700.1 | Wheat | plastid | 60.11 | 60.8 |
| TraesCS2A01G221000.1 | Wheat | plastid | 59.55 | 60.23 |
| TraesCS2B01G246600.1 | Wheat | plastid | 59.55 | 60.23 |
| EER97310 | Sorghum | plastid | 60.67 | 58.7 |
| Zm00001d021645_P001 | Maize | plastid | 61.24 | 58.6 |
| GSMUA_Achr9P30190_001 | Banana | plastid | 55.62 | 55.31 |
Protein Annotations
| EnsemblPlants:CDY29435 | EnsemblPlantsGene:GSBRNA2T00043045001 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR020683 |
| InterPro:IPR036770 | PFscan:PS50297 | ProteinID:CDY29435 | ProteinID:CDY29435.1 | SEG:seg | SUPFAM:SSF48403 |
| UniParc:UPI0004EBAD00 | UniProt:A0A078GSG0 | MapMan:23.1.7.1 | : | : | : |
Description
BnaC05g32350DBnaC05g32350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSG0]
Coordinates
chrLK032237:+:11390..12263
Molecular Weight (calculated)
19236.6 Da
IEP (calculated)
5.010
GRAVY (calculated)
-0.299
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MASISSCTAP CASLFSSTTK PINSSSSSSS SSVRLSSRFL GTRVVKLSIR LGPSNGSRAT CWFKFGKNGV DAENAGIYGS QSRDDFDRDD VEQYFNYMGM
101: LAVEGTYDKM EALLNQNIHP VDILLMLAAS EGDKPKIEEL LRAGADYTVK DADGRTALDR ASSEEIRDLI LGSLTQKA
101: LAVEGTYDKM EALLNQNIHP VDILLMLAAS EGDKPKIEEL LRAGADYTVK DADGRTALDR ASSEEIRDLI LGSLTQKA
001: MASSSISFSC APSLATSLFS TTSSSPRLLS SRFLGTRNLK LRIRPARLGP SNGSRTTCWF KFGKNGVDAE NAGIYGSQSR DDFDRDDVEQ YFNYMGMLAV
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
Arabidopsis Description
LTDProtein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.