Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035772.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDY29435 | Canola | plastid | 98.31 | 97.75 |
| CDY07336 | Canola | plastid | 75.14 | 80.12 |
| CDY25188 | Canola | plastid | 79.1 | 79.55 |
| CDY29612 | Canola | plastid | 79.1 | 79.55 |
| CDY25178 | Canola | plastid | 77.97 | 77.97 |
| VIT_19s0177g00340.t01 | Wine grape | plastid | 68.93 | 70.93 |
| GSMUA_Achr9P11670_001 | Banana | plastid | 70.62 | 70.22 |
| KRG98845 | Soybean | plastid | 70.06 | 70.06 |
| GSMUA_Achr6P29360_001 | Banana | plastid | 66.1 | 67.63 |
| Solyc10g006370.2.1 | Tomato | plastid | 65.54 | 67.44 |
| KRH46109 | Soybean | plastid | 68.93 | 67.4 |
| PGSC0003DMT400037299 | Potato | plastid | 64.97 | 66.86 |
| VIT_19s0177g00330.t01 | Wine grape | cytosol | 33.33 | 62.11 |
| Os07t0520800-01 | Rice | plasma membrane, plastid | 57.63 | 61.82 |
| TraesCS2D01G226700.1 | Wheat | plastid | 59.89 | 60.23 |
| TraesCS2A01G221000.1 | Wheat | plastid | 59.32 | 59.66 |
| TraesCS2B01G246600.1 | Wheat | plastid | 59.32 | 59.66 |
| EER97310 | Sorghum | plastid | 61.02 | 58.7 |
| Zm00001d021645_P001 | Maize | plastid | 61.58 | 58.6 |
| GSMUA_Achr9P30190_001 | Banana | plastid | 54.8 | 54.19 |
Protein Annotations
| EnsemblPlants:CDY19631 | EnsemblPlantsGene:GSBRNA2T00009304001 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR020683 |
| InterPro:IPR036770 | PFscan:PS50297 | ProteinID:CDY19631 | ProteinID:CDY19631.1 | SEG:seg | SUPFAM:SSF48403 |
| UniParc:UPI0001BA89B9 | UniProt:A0A078G2U2 | MapMan:23.1.7.1 | : | : | : |
Description
BnaA05g20390DBnaA05g20390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2U2]
Coordinates
chrLK032098:-:668831..669584
Molecular Weight (calculated)
19103.4 Da
IEP (calculated)
5.010
GRAVY (calculated)
-0.312
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MASISSCTAP SASLFSSTTK PINSSSSSSS SVRLSSRFLG TRVVKLRIGL GPSNGSRATC WFKFGKNGVD AENAGIYGSQ SRDDFDRDDV EQYFNYMGML
101: AVEGTYDKME ALLNQNIHPV DILLMLAASE GDKPKIEELL RAGADYTVKD ADGRTALDRA SSEEIRDLIL GSLTQKA
101: AVEGTYDKME ALLNQNIHPV DILLMLAASE GDKPKIEELL RAGADYTVKD ADGRTALDRA SSEEIRDLIL GSLTQKA
001: MASSSISFSC APSLATSLFS TTSSSPRLLS SRFLGTRNLK LRIRPARLGP SNGSRTTCWF KFGKNGVDAE NAGIYGSQSR DDFDRDDVEQ YFNYMGMLAV
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
Arabidopsis Description
LTDProtein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.