Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46109 | Soybean | plastid | 94.35 | 92.27 |
| VIT_19s0177g00340.t01 | Wine grape | plastid | 70.62 | 72.67 |
| Bra035772.1-P | Field mustard | plastid | 70.06 | 70.06 |
| CDY19631 | Canola | plastid | 70.06 | 70.06 |
| CDY29435 | Canola | plastid | 70.06 | 69.66 |
| GSMUA_Achr6P29360_001 | Banana | plastid | 66.67 | 68.21 |
| GSMUA_Achr9P11670_001 | Banana | plastid | 68.36 | 67.98 |
| Bra030468.1-P | Field mustard | plastid | 67.23 | 67.61 |
| CDY29612 | Canola | plastid | 67.23 | 67.61 |
| Bra018876.1-P | Field mustard | plastid | 66.67 | 67.05 |
| CDY25188 | Canola | plastid | 66.67 | 67.05 |
| CDY07336 | Canola | plastid | 62.71 | 66.87 |
| CDY25178 | Canola | plastid | 66.67 | 66.67 |
| AT1G50900.1 | Thale cress | plastid | 64.41 | 65.14 |
| PGSC0003DMT400037299 | Potato | plastid | 62.71 | 64.53 |
| Solyc10g006370.2.1 | Tomato | plastid | 62.71 | 64.53 |
| Os07t0520800-01 | Rice | plasma membrane, plastid | 57.63 | 61.82 |
| VIT_19s0177g00330.t01 | Wine grape | cytosol | 32.77 | 61.05 |
| TraesCS2A01G221000.1 | Wheat | plastid | 58.76 | 59.09 |
| TraesCS2D01G226700.1 | Wheat | plastid | 58.76 | 59.09 |
| TraesCS2B01G246600.1 | Wheat | plastid | 58.19 | 58.52 |
| EER97310 | Sorghum | plastid | 60.45 | 58.15 |
| Zm00001d021645_P001 | Maize | plastid | 60.45 | 57.53 |
| GSMUA_Achr9P30190_001 | Banana | plastid | 55.37 | 54.75 |
Protein Annotations
| Gene3D:1.25.40.20 | EntrezGene:100499940 | MapMan:23.1.7.1 | EMBL:ACUP02010924 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| EMBL:BT090202 | UniProt:C6SYF4 | EnsemblPlantsGene:GLYMA_18G102100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009536 | GO:GO:0009570 | InterPro:IPR020683 | InterPro:IPR036770 | EnsemblPlants:KRG98845 |
| ProteinID:KRG98845 | ProteinID:KRG98845.1 | ProteinID:KRG98846.1 | PFscan:PS50297 | SUPFAM:SSF48403 | UniParc:UPI0001B1579F |
Description
hypothetical protein
Coordinates
chr18:+:10822751..10828225
Molecular Weight (calculated)
19429.0 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.328
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MASISCITHH PITSKLNNAF SSPHVSASNL ASRFLGTRKR VGLHSLTSRI IGPSNGSKAT CWFRFGKNGV DAKGAGIYGS QGRDDFDRDD VEQYFNYMGM
101: LAVEGTYDKM EALLSQNIHP VDILLLLAAS ESDKPKIEEL LRAGAKYDVK DADGRTALDR ATDEIKDFIL NFSVQRA
101: LAVEGTYDKM EALLSQNIHP VDILLLLAAS ESDKPKIEEL LRAGAKYDVK DADGRTALDR ATDEIKDFIL NFSVQRA
001: MASSSISFSC APSLATSLFS TTSSSPRLLS SRFLGTRNLK LRIRPARLGP SNGSRTTCWF KFGKNGVDAE NAGIYGSQSR DDFDRDDVEQ YFNYMGMLAV
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
101: EGTYSKMEAL LNLNIHPVDI LLMLAATEGD RPKIEELLKA GADYSVKDAD GRTAIDRANS EEIRDLILGY STQKA
Arabidopsis Description
LTDProtein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.