CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92716
EES01406
EES05730
EES09081
EES16486
EES16504
EES19859
OQU82706

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63210.1	EES05730	AT2G31985.1	21798944
AT3G63210.1	EES09081	AT2G38270.1	21798944
AT3G63210.1	EES16486	AT2G38270.1	21798944
AT3G63210.1	EES16504	AT3G08850.1	21798944
AT3G63210.1	OQU82706	AT3G08850.1	21798944
AT3G63210.1	EES01406	AT3G29160.1	21798944
AT3G63210.1	EES19859	AT3G29160.1	21798944
AT3G63210.1	EER92716	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013595_P001	Maize	mitochondrion	73.57	71.74
Os03t0665200-01	Rice	nucleus	68.47	71.19
TraesCS4D01G016600.1	Wheat	mitochondrion	60.51	67.86
TraesCS4A01G295300.1	Wheat	plastid	58.6	61.54
TraesCS4B01G018400.1	Wheat	plastid	59.24	61.18
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	53.82	38.67
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	34.39	36.86
Bra023820.1-P	Field mustard	mitochondrion	30.57	36.64
CDY34246	Canola	mitochondrion	29.62	35.5
CDX98213	Canola	mitochondrion	29.62	35.5
KRG91310	Soybean	nucleus, plastid	30.25	35.32
CDX92948	Canola	mitochondrion	29.62	35.23
AT3G22550.1	Thale cress	mitochondrion	29.94	35.21
CDY65610	Canola	mitochondrion, nucleus	29.94	35.07
Bra001873.1-P	Field mustard	mitochondrion	29.3	34.85
Bra007736.1-P	Field mustard	plastid	25.8	34.76
Solyc09g082210.2.1	Tomato	cytosol, plastid	32.48	34.69
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	32.17	34.59
KRH35505	Soybean	nucleus, plastid	29.3	34.59
CDX93919	Canola	nucleus	26.11	34.31
PGSC0003DMT400082082	Potato	nucleus, plastid	32.8	34.11
KRH32034	Soybean	mitochondrion	29.3	34.07
Bra039962.1-P	Field mustard	mitochondrion, nucleus	28.98	33.96
CDX76690	Canola	plastid	24.84	33.33
KRH27651	Soybean	plastid	27.39	33.2
CDY56452	Canola	plastid	24.84	33.05
CDY24316	Canola	mitochondrion, plastid	22.93	33.03
KRH71405	Soybean	mitochondrion, nucleus	27.07	32.32
KRH67235	Soybean	mitochondrion, nucleus	28.34	31.45
AT3G63210.1	Thale cress	mitochondrion, plastid	26.11	31.18
KRH77839	Soybean	plastid	25.8	31.03
KRG95554	Soybean	mitochondrion, nucleus	27.39	30.39
Solyc09g065390.1.1	Tomato	mitochondrion	17.52	29.89
GSMUA_Achr4P22610_001	Banana	nucleus	35.67	29.79
GSMUA_Achr4P21250_001	Banana	nucleus	33.12	28.34
EES00181	Sorghum	cytosol, extracellular, nucleus	25.48	28.17
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.84	27.76
EES00998	Sorghum	cytosol, plastid	22.61	26.2
EES01375	Sorghum	plastid	21.34	25.48
CDY53722	Canola	extracellular, vacuole	27.39	23.5
CDX67936	Canola	nucleus, plastid	17.52	21.57
Bra040437.1-P	Field mustard	mitochondrion, plastid	27.39	21.55
OQU77551	Sorghum	mitochondrion, plastid	25.16	21.29
AT1G79970.1	Thale cress	nucleus, plastid	15.92	20.83
Bra003541.1-P	Field mustard	nucleus, plastid	17.52	19.78
CDX79402	Canola	nucleus, plastid	16.88	19.06
Solyc06g009000.1.1	Tomato	plastid	15.61	17.01
PGSC0003DMT400037957	Potato	plastid	15.61	16.72

Protein Annotations

EnsemblPlants:EER91113	EnsemblPlantsGene:SORBI_3001G144200	EntrezGene:8057188	EntrezGene:8057192	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF65	PFAM:PF04570	PFscan:PS51795	ProteinID:EER91113	ProteinID:EER91113.1
ProteinID:KXG37884.1	RefSeq:XP_002464115.1	SEG:seg	unigene:Sbi.15125	unigene:Sbi.17171	UniParc:UPI0001A81FC2
UniProt:C5WQC5	MapMan:27.3.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11580589..11584174

Molecular Weight (calculated)

32380.6 Da

IEP (calculated)

6.756

GRAVY (calculated)

0.015

Length

314 amino acids

Sequence
(BLAST)

001: MLRNRSRSRA VGAGAGANQG GPGGGLMAEL PAATAAQSPR HPSSASSAAA APVFPSPRPF VAMALPPQAG LLLDGSFEGP SSAVSPTSIL ETKQFCCSAL
101: PPFLSERSLR RAHTDAAVAP EPAGVGLADV LRDHGDAKVA GGKVVFGSQL RIQVPSGRAV ELVSSPIEFG AKNRDAQLAV LSPARRFLPE VVSSPSARVF
201: AGGVAVVPPG EMAMSEDYTC VISRGPNPRT THIFDDCIVE SCGDLLLEKA DKAASFVAGG AAGTCGFLSS CHACNKQLGH GNDILIYGGD KAFCSSECRY
301: QEMMLFDEAV DNLR

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.