Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67936 | Canola | nucleus, plastid | 42.5 | 40.0 |
| CDX79402 | Canola | nucleus, plastid | 42.5 | 36.69 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 40.83 | 35.25 |
| KRH77839 | Soybean | plastid | 23.75 | 21.84 |
| KRH27651 | Soybean | plastid | 23.33 | 21.62 |
| KRG91310 | Soybean | nucleus, plastid | 24.17 | 21.56 |
| KRH35505 | Soybean | nucleus, plastid | 23.75 | 21.43 |
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 19.58 | 19.92 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 24.17 | 19.86 |
| AT3G22550.1 | Thale cress | mitochondrion | 21.67 | 19.48 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 22.5 | 19.15 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 26.67 | 18.6 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 21.67 | 18.18 |
| Os03t0665200-01 | Rice | nucleus | 22.08 | 17.55 |
| TraesCS4D01G016600.1 | Wheat | mitochondrion | 20.0 | 17.14 |
| GSMUA_Achr9P25720_001 | Banana | nucleus | 23.33 | 17.07 |
| Zm00001d032937_P001 | Maize | cytosol | 20.0 | 17.02 |
| Zm00001d013595_P001 | Maize | mitochondrion | 22.5 | 16.77 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 18.33 | 16.73 |
| EER94230 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 19.58 | 16.73 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 20.83 | 16.56 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 20.0 | 16.11 |
| EER91113 | Sorghum | mitochondrion | 20.83 | 15.92 |
| TraesCS4A01G295300.1 | Wheat | plastid | 19.58 | 15.72 |
| AT2G25690.1 | Thale cress | cytosol | 20.83 | 15.43 |
| TraesCS4B01G018400.1 | Wheat | plastid | 19.17 | 15.13 |
| Os10t0422600-01 | Rice | endoplasmic reticulum | 20.0 | 13.91 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 20.42 | 13.03 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 19.58 | 12.81 |
| PGSC0003DMT400037957 | Potato | plastid | 14.58 | 11.95 |
| Solyc06g009000.1.1 | Tomato | plastid | 13.75 | 11.46 |
| HORVU4Hr1G002700.4 | Barley | cytosol, golgi, mitochondrion | 17.5 | 9.61 |
| HORVU3Hr1G018540.1 | Barley | extracellular | 5.0 | 9.23 |
Protein Annotations
| MapMan:35.2 | EntrezGene:844337 | ProteinID:AAG52263.1 | ProteinID:AEE36336.1 | ArrayExpress:AT1G79970 | EnsemblPlantsGene:AT1G79970 |
| RefSeq:AT1G79970 | TAIR:AT1G79970 | RefSeq:AT1G79970-TAIR-G | EnsemblPlants:AT1G79970.1 | TAIR:AT1G79970.1 | EMBL:AY045688 |
| EMBL:AY054148 | Unigene:At.22309 | GO:GO:0008150 | RefSeq:NP_565224.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF15 | UniProt:Q9CA98 | UniParc:UPI000009FB59 | SEG:seg | : | : |
Description
At1g79970/F19K16.7 [Source:UniProtKB/TrEMBL;Acc:Q9CA98]
Coordinates
chr1:+:30082077..30083894
Molecular Weight (calculated)
26167.1 Da
IEP (calculated)
4.298
GRAVY (calculated)
-0.591
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEASDSDSS DESLKHNSTP PLFSISGFFC VAKGGDSDPG RSPTSPLDFG VFGGLFSPRS SSSSPLHRNK WLSHKVGLSL LSSSFELGDD PFRRDYIVLA
101: PQVKVNNVNT ATPKLSSDPC VIVEEPRRSS SSSPMDIIST YSRSLSGREM ALSEDYTCII SHGPNPKTTY IFGDCILDCD PKDLGKEDIE IHEEGDDSFS
201: TEKPQNHREV SAEKESENAG AEESCYEEED LFPMAMPLNP
101: PQVKVNNVNT ATPKLSSDPC VIVEEPRRSS SSSPMDIIST YSRSLSGREM ALSEDYTCII SHGPNPKTTY IFGDCILDCD PKDLGKEDIE IHEEGDDSFS
201: TEKPQNHREV SAEKESENAG AEESCYEEED LFPMAMPLNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.