Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G016600.1 | Wheat | mitochondrion | 69.87 | 75.36 |
| EER91113 | Sorghum | mitochondrion | 71.19 | 68.47 |
| TraesCS4A01G295300.1 | Wheat | plastid | 66.23 | 66.89 |
| TraesCS4B01G018400.1 | Wheat | plastid | 66.89 | 66.45 |
| Zm00001d013595_P001 | Maize | mitochondrion | 69.21 | 64.91 |
| HORVU4Hr1G002700.4 | Barley | cytosol, golgi, mitochondrion | 55.96 | 38.67 |
| KRH35505 | Soybean | nucleus, plastid | 32.45 | 36.84 |
| KRG91310 | Soybean | nucleus, plastid | 32.78 | 36.8 |
| CDX92948 | Canola | mitochondrion | 32.12 | 36.74 |
| Bra001873.1-P | Field mustard | mitochondrion | 31.79 | 36.36 |
| VIT_07s0151g00800.t01 | Wine grape | mitochondrion, nucleus | 35.1 | 36.18 |
| Bra007736.1-P | Field mustard | plastid | 27.81 | 36.05 |
| KRH27651 | Soybean | plastid | 30.79 | 35.91 |
| Bra023820.1-P | Field mustard | mitochondrion | 31.13 | 35.88 |
| CDY65610 | Canola | mitochondrion, nucleus | 31.79 | 35.82 |
| CDY24316 | Canola | mitochondrion, plastid | 25.83 | 35.78 |
| CDX76690 | Canola | plastid | 27.48 | 35.47 |
| CDY56452 | Canola | plastid | 27.48 | 35.17 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 33.77 | 34.93 |
| CDX98213 | Canola | mitochondrion | 30.13 | 34.73 |
| CDY34246 | Canola | mitochondrion | 30.13 | 34.73 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 30.79 | 34.7 |
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 33.77 | 34.69 |
| AT3G22550.1 | Thale cress | mitochondrion | 30.46 | 34.46 |
| CDX93919 | Canola | nucleus | 27.15 | 34.31 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 34.11 | 34.11 |
| KRH32034 | Soybean | mitochondrion | 30.46 | 34.07 |
| KRH77839 | Soybean | plastid | 29.14 | 33.72 |
| KRH71405 | Soybean | mitochondrion, nucleus | 28.81 | 33.08 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 28.48 | 32.7 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 19.54 | 32.07 |
| KRH67235 | Soybean | mitochondrion, nucleus | 28.81 | 30.74 |
| Os01t0180400-01 | Rice | cytosol | 18.54 | 29.79 |
| KRG95554 | Soybean | mitochondrion, nucleus | 27.15 | 28.98 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 35.76 | 28.72 |
| Os01t0593200-01 | Rice | nucleus | 23.84 | 27.69 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 32.45 | 26.7 |
| Os10t0422600-01 | Rice | endoplasmic reticulum | 30.46 | 26.67 |
| Os01t0719000-01 | Rice | cytosol | 22.52 | 25.95 |
| CDY53722 | Canola | extracellular, vacuole | 28.81 | 23.77 |
| Os05t0180500-01 | Rice | cytosol | 25.17 | 23.24 |
| CDX67936 | Canola | nucleus, plastid | 18.87 | 22.35 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 17.55 | 22.08 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 28.81 | 21.8 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 19.87 | 21.58 |
| CDX79402 | Canola | nucleus, plastid | 18.21 | 19.78 |
| PGSC0003DMT400037957 | Potato | plastid | 16.89 | 17.41 |
| Solyc06g009000.1.1 | Tomato | plastid | 16.56 | 17.36 |
Protein Annotations
| EMBL:AK066202 | EnsemblPlants:Os03t0665200-01 | EnsemblPlantsGene:Os03g0665200 | EntrezGene:4333657 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF65 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AAR88611.1 | ProteinID:ABF98059.1 |
| ProteinID:BAF12755.1 | ProteinID:BAS85631.1 | ProteinID:EEE59639.1 | RefSeq:XP_015628008.1 | SEG:seg | UniParc:UPI0000232A8B |
| UniProt:Q75GB5 | MapMan:27.3.3 | : | : | : | : |
Description
Protein of unknown function DUF581 family protein. (Os03t0665200-01)
Coordinates
chr3:-:26152222..26155155
Molecular Weight (calculated)
31787.6 Da
IEP (calculated)
6.848
GRAVY (calculated)
-0.248
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRNRSRRSV GAKQGGVTAM AQPEPPPPSS QSSSSSSSSS PVFPSPRPFM ALPHPPQAGF LDGAAEGPSS SMSPTSILET KQFCCSSAMP PFLSERSLRK
101: AHVEMAAAPP EPAGVGLADV LREHHGGGKA GGGKVVFGSQ LRIQVPTGRA VELVSSPIEF GVKNRDAHLA AMSPARRFLP EVVSSPSARV FAAAVVSPGE
201: MAMSEDYTCV ISRGPNPRTT HIFDDCIVES CGDVLVEKVA GGGGDGDGDA VRTNGFLNSC YACNKQLGHG NDIFIYRGDK AFCSSECRYQ EMLFDEAVDN
301: LR
101: AHVEMAAAPP EPAGVGLADV LREHHGGGKA GGGKVVFGSQ LRIQVPTGRA VELVSSPIEF GVKNRDAHLA AMSPARRFLP EVVSSPSARV FAAAVVSPGE
201: MAMSEDYTCV ISRGPNPRTT HIFDDCIVES CGDVLVEKVA GGGGDGDGDA VRTNGFLNSC YACNKQLGHG NDIFIYRGDK AFCSSECRYQ EMLFDEAVDN
301: LR
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.