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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003541.1-P Field mustard nucleus, plastid 83.53 76.62
CDX79402 Canola nucleus, plastid 71.37 65.47
AT1G79970.1 Thale cress nucleus, plastid 40.0 42.5
KRG91310 Soybean nucleus, plastid 25.1 23.79
KRH35505 Soybean nucleus, plastid 23.92 22.93
VIT_05s0020g03670.t01 Wine grape nucleus, plastid 25.1 21.92
KRH27651 Soybean plastid 21.57 21.24
GSMUA_Achr1P14130_001 Banana mitochondrion 23.53 20.98
GSMUA_Achr8P20380_001 Banana mitochondrion, nucleus 23.14 20.92
GSMUA_Achr3P25470_001 Banana mitochondrion 19.22 20.76
KRH77839 Soybean plastid 21.18 20.69
CDY38508 Canola cytosol 25.1 20.58
CDY65610 Canola mitochondrion, nucleus 21.57 20.52
CDY11512 Canola nucleus 23.92 20.33
CDX98213 Canola mitochondrion 20.78 20.23
CDX92948 Canola mitochondrion 20.78 20.08
CDX76742 Canola nucleus 23.53 20.0
CDX69754 Canola nucleus, plastid 21.57 20.0
CDY34246 Canola mitochondrion 20.39 19.85
CDX93919 Canola nucleus 18.43 19.67
CDX76690 Canola plastid 18.04 19.66
Os03t0665200-01 Rice nucleus 22.35 18.87
CDY24316 Canola mitochondrion, plastid 16.08 18.81
CDX83224 Canola cytosol 23.92 18.71
CDY56452 Canola plastid 17.25 18.64
CDX97112 Canola nucleus, plastid 20.0 18.61
GSMUA_Achr6P22030_001 Banana cytosol 21.96 18.54
TraesCS4D01G016600.1 Wheat mitochondrion 20.0 18.21
GSMUA_Achr2P08850_001 Banana plastid 21.18 18.12
EER91113 Sorghum mitochondrion 21.57 17.52
GSMUA_Achr9P25720_001 Banana nucleus 22.35 17.38
Zm00001d032937_P001 Maize cytosol 19.22 17.38
CDX85711 Canola plastid 15.29 17.26
Zm00001d013595_P001 Maize mitochondrion 21.57 17.08
TraesCS4A01G295300.1 Wheat plastid 20.0 17.06
TraesCS4B01G018400.1 Wheat plastid 20.0 16.78
EER94230 Sorghum cytosol, endoplasmic reticulum, nucleus 17.65 16.01
Solyc06g009000.1.1 Tomato plastid 16.86 14.93
PGSC0003DMT400037957 Potato plastid 16.86 14.68
Os10t0422600-01 Rice endoplasmic reticulum 19.22 14.2
GSMUA_Achr4P22610_001 Banana nucleus 20.39 13.83
GSMUA_Achr4P21250_001 Banana nucleus 19.61 13.62
CDY53722 Canola extracellular, vacuole 18.04 12.57
HORVU4Hr1G002700.4 Barley cytosol, golgi, mitochondrion 18.43 10.76
HORVU3Hr1G018540.1 Barley extracellular 5.1 10.0
Protein Annotations
EnsemblPlants:CDX67936EnsemblPlantsGene:GSBRNA2T00099145001PANTHER:PTHR33059PANTHER:PTHR33059:SF15ProteinID:CDX67936ProteinID:CDX67936.1
SEG:segUniParc:UPI0004EDE551MapMan:35.2:::
Description
BnaA07g19760D
Coordinates
chrLK031787:+:2972240..2974089
Molecular Weight (calculated)
27608.0 Da
IEP (calculated)
4.435
GRAVY (calculated)
-0.477
Length
255 amino acids
Sequence
(BLAST)
001: MAEADPDSSD TSDLKPISSS APLFSIPRFF VAKESDAAGR SPTSPLDFTI FGGLFSPRSH PAAPSSPRFR NRWACDKVGL SLLSSSVGEE EGHEEGLFNI
101: VLAPQIKPRL FGSCVKSYSL PKNYAAPSMR SSSSPMDIIS SQAYSRSLSA REMALSEDYT CIISHGPNPK TTHIFGDCIL DCDPNELGTK DETEKPEGDD
201: VSFLCLCTDK PQNHIHMHSE TAAAEEKESD KGGEEDCLEI SPGTSYNEDL FPMAS
Best Arabidopsis Sequence Match ( AT1G79970.1 )
(BLAST)
001: MGEASDSDSS DESLKHNSTP PLFSISGFFC VAKGGDSDPG RSPTSPLDFG VFGGLFSPRS SSSSPLHRNK WLSHKVGLSL LSSSFELGDD PFRRDYIVLA
101: PQVKVNNVNT ATPKLSSDPC VIVEEPRRSS SSSPMDIIST YSRSLSGREM ALSEDYTCII SHGPNPKTTY IFGDCILDCD PKDLGKEDIE IHEEGDDSFS
201: TEKPQNHREV SAEKESENAG AEESCYEEED LFPMAMPLNP
Arabidopsis Description
At1g79970/F19K16.7 [Source:UniProtKB/TrEMBL;Acc:Q9CA98]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.