Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 35.67 | 49.58 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 41.46 | 48.23 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 41.46 | 47.55 |
| KRG91310 | Soybean | nucleus, plastid | 34.45 | 42.01 |
| KRH27651 | Soybean | plastid | 32.62 | 41.31 |
| Bra023820.1-P | Field mustard | mitochondrion | 32.93 | 41.22 |
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 36.59 | 40.82 |
| KRH35505 | Soybean | nucleus, plastid | 32.93 | 40.6 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 35.67 | 40.07 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 36.89 | 40.07 |
| CDX98213 | Canola | mitochondrion | 31.71 | 39.69 |
| CDY34246 | Canola | mitochondrion | 31.71 | 39.69 |
| KRH32034 | Soybean | mitochondrion | 32.32 | 39.26 |
| KRG95554 | Soybean | mitochondrion, nucleus | 33.84 | 39.22 |
| CDY65610 | Canola | mitochondrion, nucleus | 32.01 | 39.18 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 31.71 | 38.81 |
| Bra001873.1-P | Field mustard | mitochondrion | 31.1 | 38.64 |
| AT3G22550.1 | Thale cress | mitochondrion | 31.4 | 38.58 |
| VIT_07s0151g00800.t01 | Wine grape | mitochondrion, nucleus | 34.45 | 38.57 |
| CDX92948 | Canola | mitochondrion | 30.79 | 38.26 |
| KRH67235 | Soybean | mitochondrion, nucleus | 32.93 | 38.16 |
| KRH77839 | Soybean | plastid | 30.18 | 37.93 |
| CDY24316 | Canola | mitochondrion, plastid | 24.7 | 37.16 |
| KRH71405 | Soybean | mitochondrion, nucleus | 29.57 | 36.88 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 33.23 | 36.58 |
| Bra007736.1-P | Field mustard | plastid | 25.91 | 36.48 |
| CDX76690 | Canola | plastid | 24.7 | 34.62 |
| CDY56452 | Canola | plastid | 24.39 | 33.9 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 38.41 | 33.51 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 26.52 | 33.08 |
| CDX93919 | Canola | nucleus | 24.09 | 33.05 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 17.68 | 31.52 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 28.05 | 30.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.1 | 29.14 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 32.01 | 28.61 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 30.79 | 27.67 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 17.07 | 23.33 |
| CDY53722 | Canola | extracellular, vacuole | 25.0 | 22.4 |
| CDX67936 | Canola | nucleus, plastid | 17.38 | 22.35 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 27.74 | 21.93 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 18.29 | 21.58 |
| CDX79402 | Canola | nucleus, plastid | 17.99 | 21.22 |
| Solyc06g009000.1.1 | Tomato | plastid | 18.6 | 21.18 |
| PGSC0003DMT400037957 | Potato | plastid | 18.9 | 21.16 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 21.04 | 20.72 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 25.0 | 20.55 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P25720_001 | EnsemblPlants:GSMUA_Achr9T25720_001 | EnsemblPlantsGene:GSMUA_Achr9G25720_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF26 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000294A26C | UniProt:M0U3H9 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G25720_001]
Coordinates
chr9:-:30218225..30220519
Molecular Weight (calculated)
36109.4 Da
IEP (calculated)
7.707
GRAVY (calculated)
-0.497
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRNRSRAVG GKQGLMSDSQ PFPSPTGNSL SKPTASSLFP SPRLFRSFSS KGFADSEVAM SPTSILETRH LSSFGNVLYS DKQPKKPPCE VVSASTESKH
101: HSRNYGRPEP IGLGLVDALN DDKAKESSKA ERRMVVSGSQ LRIQIPSINS NSNSLGRSLG HHHEVSVSSP RVFTGSISAS EMELSEDYTC VISHGPNPKT
201: THIFDNCIVE SCGEEFMPAR KDNSFVPSQG YPADDFITFC YACKKILGHG KDIFMYRGEK AFCSNECRYH EMLIYEELDN HSTDSSLKSS PSFSSSHSCT
301: MQETHLLLAH CSQAITFRLP NRCSLTTC
101: HSRNYGRPEP IGLGLVDALN DDKAKESSKA ERRMVVSGSQ LRIQIPSINS NSNSLGRSLG HHHEVSVSSP RVFTGSISAS EMELSEDYTC VISHGPNPKT
201: THIFDNCIVE SCGEEFMPAR KDNSFVPSQG YPADDFITFC YACKKILGHG KDIFMYRGEK AFCSNECRYH EMLIYEELDN HSTDSSLKSS PSFSSSHSCT
301: MQETHLLLAH CSQAITFRLP NRCSLTTC
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.