Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 45.48 | 47.43 |
| Os01t0180400-01 | Rice | cytosol | 23.56 | 45.74 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 40.27 | 35.77 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 40.0 | 35.18 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 26.58 | 34.15 |
| Zm00001d039597_P001 | Maize | cytosol | 32.6 | 33.52 |
| PGSC0003DMT400037607 | Potato | nucleus | 35.07 | 32.57 |
| Os05t0180500-01 | Rice | cytosol | 29.04 | 32.42 |
| CDX69754 | Canola | nucleus, plastid | 24.11 | 32.0 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 30.68 | 31.82 |
| Solyc08g067970.2.1 | Tomato | nucleus | 35.34 | 31.77 |
| Zm00001d008782_P001 | Maize | nucleus | 30.41 | 31.44 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 30.41 | 31.44 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 30.41 | 31.09 |
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 20.0 | 30.93 |
| GSMUA_Achr9P25720_001 | Banana | nucleus | 27.67 | 30.79 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 21.37 | 30.59 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 22.74 | 30.18 |
| KRH05019 | Soybean | nucleus | 32.33 | 29.57 |
| CDY11512 | Canola | nucleus | 23.84 | 29.0 |
| Zm00001d037713_P001 | Maize | cytosol | 26.03 | 28.96 |
| OQU77551 | Sorghum | mitochondrion, plastid | 29.04 | 28.57 |
| TraesCS1B01G139200.1 | Wheat | plastid | 28.49 | 28.42 |
| CDX85711 | Canola | plastid | 17.53 | 28.32 |
| CDY38508 | Canola | cytosol | 24.11 | 28.3 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 21.92 | 27.97 |
| CDX97112 | Canola | nucleus, plastid | 20.82 | 27.74 |
| Bra007780.1-P | Field mustard | nucleus | 22.47 | 27.7 |
| CDX83224 | Canola | cytosol | 24.66 | 27.61 |
| KRH52543 | Soybean | nucleus | 31.78 | 27.49 |
| AT2G25690.1 | Thale cress | cytosol | 24.38 | 27.47 |
| CDX76742 | Canola | nucleus | 22.47 | 27.33 |
| KRH61879 | Soybean | extracellular | 33.15 | 27.31 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 21.1 | 27.3 |
| KRH09840 | Soybean | plastid | 29.59 | 27.2 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 22.19 | 27.18 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 29.32 | 27.09 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 24.66 | 27.03 |
| KRH16080 | Soybean | nucleus | 29.59 | 26.6 |
| KRH23481 | Soybean | plastid | 28.77 | 26.38 |
| TraesCS1A01G119800.1 | Wheat | plastid | 28.49 | 26.33 |
| Bra023326.1-P | Field mustard | plastid | 16.44 | 26.32 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 21.37 | 25.83 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 24.66 | 25.07 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 22.74 | 24.13 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 22.74 | 22.07 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 20.27 | 20.16 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 23.84 | 19.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P13270_001 | EnsemblPlants:GSMUA_Achr7T13270_001 | EnsemblPlantsGene:GSMUA_Achr7G13270_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF15 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000295CA39 | UniProt:M0TH64 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G13270_001]
Coordinates
chr7:-:10690446..10692083
Molecular Weight (calculated)
39580.4 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.511
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKVQKDHCK GQLLSDSTSD SCFSSNGLIQ KARNATLFSV PGLFVGFSAK GLSESDAVRS PTSPLDYKGC WDRTRVGLRL VDTLNDETKP CGKLLGLSES
101: SNILFAPRMR INISSPKPHL VGPGDDCTGA APKSLPKDYR TSPQTGRSKG AESECGEVGL LRSCSVVVST SSSTPIDSKS ESEVFASDSK SSMAEGSANF
201: DKLSGSLPVS IGGSPCGVIA SLSASEIEQS EDYTCIISHG PNPKTTHIFG DCILESHSFP SRDLRKKHRK DEERSAWMLK PSEEDAPPCP SGDFLRCCFS
301: CKKKLEEGKD IYMYRGEKAF CSCDCRDQEI LMEEEMEEKP TFGSSGSSTS SFHEEIFLED MTMAE
101: SNILFAPRMR INISSPKPHL VGPGDDCTGA APKSLPKDYR TSPQTGRSKG AESECGEVGL LRSCSVVVST SSSTPIDSKS ESEVFASDSK SSMAEGSANF
201: DKLSGSLPVS IGGSPCGVIA SLSASEIEQS EDYTCIISHG PNPKTTHIFG DCILESHSFP SRDLRKKHRK DEERSAWMLK PSEEDAPPCP SGDFLRCCFS
301: CKKKLEEGKD IYMYRGEKAF CSCDCRDQEI LMEEEMEEKP TFGSSGSSTS SFHEEIFLED MTMAE
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.