Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037607 | Potato | nucleus | 90.89 | 93.89 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 48.52 | 47.93 |
| KRH05019 | Soybean | nucleus | 38.92 | 39.6 |
| CDX69754 | Canola | nucleus, plastid | 25.37 | 37.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.53 | 36.57 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 24.63 | 36.36 |
| Os01t0180400-01 | Rice | cytosol | 16.5 | 35.64 |
| KRH61879 | Soybean | extracellular | 38.67 | 35.44 |
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 25.62 | 35.37 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 31.77 | 35.34 |
| KRH52543 | Soybean | nucleus | 36.45 | 35.07 |
| CDX97112 | Canola | nucleus, plastid | 23.65 | 35.04 |
| CDY11512 | Canola | nucleus | 25.62 | 34.67 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 21.67 | 34.51 |
| CDY38508 | Canola | cytosol | 26.11 | 34.08 |
| CDX83224 | Canola | cytosol | 27.09 | 33.74 |
| AT2G25690.1 | Thale cress | cytosol | 26.85 | 33.64 |
| CDX85711 | Canola | plastid | 18.47 | 33.19 |
| KRH16080 | Soybean | nucleus | 32.76 | 32.76 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 21.92 | 32.6 |
| Os01t0593200-01 | Rice | nucleus | 20.69 | 32.31 |
| CDX76742 | Canola | nucleus | 23.65 | 32.0 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 21.18 | 31.5 |
| Bra007780.1-P | Field mustard | nucleus | 22.66 | 31.08 |
| EES00998 | Sorghum | cytosol, plastid | 20.69 | 31.0 |
| Bra023326.1-P | Field mustard | plastid | 17.24 | 30.7 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 20.44 | 30.51 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 30.54 | 29.88 |
| Zm00001d044365_P001 | Maize | cytosol | 19.21 | 29.55 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 24.38 | 28.78 |
| Os05t0180500-01 | Rice | cytosol | 23.15 | 28.75 |
| Zm00001d008782_P001 | Maize | nucleus | 24.88 | 28.61 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 21.92 | 28.25 |
| Zm00001d039597_P001 | Maize | cytosol | 24.63 | 28.17 |
| Os01t0719000-01 | Rice | cytosol | 17.98 | 27.86 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 19.21 | 27.46 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 12.32 | 27.17 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 23.4 | 26.99 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 23.4 | 26.61 |
| TraesCS1B01G139200.1 | Wheat | plastid | 23.89 | 26.5 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 25.12 | 25.82 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 22.41 | 25.78 |
| EES01375 | Sorghum | plastid | 16.5 | 25.48 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 16.5 | 24.81 |
| OQU77551 | Sorghum | mitochondrion, plastid | 22.66 | 24.8 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 15.52 | 24.23 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 16.01 | 24.16 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 16.01 | 23.99 |
| Zm00001d037713_P001 | Maize | cytosol | 18.97 | 23.48 |
| Zm00001d043612_P002 | Maize | plastid | 14.29 | 22.83 |
| TraesCS1A01G119800.1 | Wheat | plastid | 21.43 | 22.03 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 19.46 | 22.01 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 17.49 | 21.32 |
| Solyc06g009000.1.1 | Tomato | plastid | 12.81 | 18.06 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 18.47 | 17.05 |
Protein Annotations
| EnsemblPlants:Solyc08g067970.2.1 | EnsemblPlantsGene:Solyc08g067970.2 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF15 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000276C681 | UniProt:K4CM21 | MapMan:27.3.3 |
Description
No Description!
Coordinates
chr8:-:57024176..57025865
Molecular Weight (calculated)
44411.1 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.448
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKKRTRSHQ KVQTMGHLMS DGISDSYFQP DVFVRKHKNN SFFNVPGVFV GFNPKGSESD SVRSPTSPLD FRVFSNLGNP FRSSTSEGAG ANKTWGCTKV
101: GLGIVDSLDD EMKHSGKVFR SSDSKNILFG TQMRIKAHDF QSCVDDSLEE PKSLPKNISI FPHTLSKSSN LRKGSSDVVF GIGDALSEHE YSRNFRSCSL
201: DSGRSSSRFA SLANRTVAVG SENAINPVVS QTKCVRGCSK LGNPAGGAKL SPIPTPVGSN TSLVGSISAS DIQLSEDYTC VRTRGPNAKV THIFCDCILE
301: CHNNELPNFC KNANEKTVLP EVTDSSEVLT SFPSSDFLRF CSSCKKKLDG KDIYMYRGEK AFCSLDCRSE AILIDEEMEK VNNDSESSIK PNSRDEVFDT
401: GLFIAT
101: GLGIVDSLDD EMKHSGKVFR SSDSKNILFG TQMRIKAHDF QSCVDDSLEE PKSLPKNISI FPHTLSKSSN LRKGSSDVVF GIGDALSEHE YSRNFRSCSL
201: DSGRSSSRFA SLANRTVAVG SENAINPVVS QTKCVRGCSK LGNPAGGAKL SPIPTPVGSN TSLVGSISAS DIQLSEDYTC VRTRGPNAKV THIFCDCILE
301: CHNNELPNFC KNANEKTVLP EVTDSSEVLT SFPSSDFLRF CSSCKKKLDG KDIYMYRGEK AFCSLDCRSE AILIDEEMEK VNNDSESSIK PNSRDEVFDT
401: GLFIAT
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.